Ochotona curzoniae (black-lipped pika): 121168312
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Entry
121168312 CDS
T11174
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121168312 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocz03041
]
121168312 (PRPF38B)
Spliceosome [BR:
ocz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
121168312 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
121168312
NCBI-ProteinID:
XP_040854208
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MANNSPALTGNSQPQHQAAAAAAQQQQQQQGGGGTKPAISGKQGNVLPLWGNEKTMNLNP
MILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVG
TGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFES
FLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPRKI
KKDGKEGTEEIDRHVERRRSRSPRRSLTPRRSPRRSRSRSHHREAHGSSSFDRELEREKE
RQRLEREAKEREKERRRSRSIDRGLDRRRSRSRDRHRSRSRSRDRKGDRRDRDREREKEN
ERGRRRDRDYDKERGADREKERERSRERSKEQRSRGEVEEKKHKEDKDERRHRDDKKDSK
KEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTD
SVEKSKKREHSPSKEKSRKRSRSKERSHKRDYGDSKDQSDKQDRGRSQSIERESQEKQQK
NKDETV
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaattcgcagccgcagcaccaggcggcggcg
gccgcggcccagcagcagcaacagcagcagggcggcggcggcaccaagccggccatctcg
ggcaagcagggcaacgtgctgccgctctggggcaacgagaagaccatgaacctcaacccc
atgatcctcaccaacatcctgtcgtcgccttacttcaaagtacagctctacgagctcaag
acctaccacgaggtggtggacgagatctactttaaggtcacacatgttgaaccatgggag
aaaggaagcaggaaaacagccggccagactgggatgtgcggaggggttcgaggtgttgga
acaggaggaatagtttctacagcattttgtctattatacaaattatttacgttgaagttg
actcgcaagcaagtgatgggtctaataacacacacagattcaccatatattagagccctt
ggctttatgtatataaggtatacacagccacctacagatctatgggactggtttgaatcc
tttcttgatgatgaagaggacctagatgtgaaggctggtggaggctgtgtaatgaccatt
ggagaaatgctgcggtcttttcttacaaaactggagtggttttctaccttgtttccaaga
attccagttccagttcagaaaaatattgatcaacagattaaaactcgacctagaaaaatc
aagaaagatgggaaggaagggactgaggaaatagacagacatgttgaacgcagacgttca
aggtctccaaggagatcactgactccacggaggtctccaagaagatcaagaagtaggagt
catcatcgagaggcccatgggtcttctagctttgatagagaattagaaagagaaaaagaa
cggcagcgtctagagcgtgaagccaaagaaagggaaaaagaaaggcgaagatcccgaagt
attgatcgggggttagaccgcagacggagcaggagtagagacagacatagaagccgtagt
cgaagtcgtgataggaaaggagatagaagggacagggatcgggaaagagagaaagaaaat
gagagaggtagaagacgagatcgagactatgataaggaaagaggagccgaccgagaaaag
gaaagggaacggtcgagagaacggtccaaggagcagagaagcaggggtgaggtggaagag
aagaaacataaagaagacaaagacgagaggcggcacagagatgacaaaaaagattcgaag
aaagagaaaaagcacagtagaagtagaagtagggaaaggaaacacagaagcaggagtaga
agtagaaatgcagggaaacgaagtagaagcaggagcaaggaaaaatcaagtaaacataaa
aatgaaagtaaagaaaaatcaaataaacgaagtagaagcggcagtcaaggaagaactgac
agtgttgaaaaatcaaagaaacgggaacatagccccagcaaagaaaaatctagaaagcgt
agcagaagcaaagaacgttcccacaaacgagattacggtgatagtaaggaccagtcagac
aaacaggatcgtggaaggagccaaagtatagaacgggagagccaagaaaagcaacagaag
aacaaagatgagactgtgtga
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