Ochotona curzoniae (black-lipped pika): 121168363
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Entry
121168363 CDS
T11174
Symbol
SARS1
Name
(RefSeq) serine--tRNA ligase, cytoplasmic isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121168363 (SARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocz01007
]
121168363 (SARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocz03016
]
121168363 (SARS1)
Enzymes [BR:
ocz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
121168363 (SARS1)
Amino acid related enzymes [BR:
ocz01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
121168363 (SARS1)
Transfer RNA biogenesis [BR:
ocz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121168363 (SARS1)
Prokaryotic type
121168363 (SARS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NOD
Motif
Other DBs
NCBI-GeneID:
121168363
NCBI-ProteinID:
XP_040854317
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MVLDLDLFRVDKGGDPALIRESQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLC
SKTIGEKMKKKEPVGDDESIPENVLNFDDVTADTLANLKVSQIKKVRLLIDEAILKCDTE
RLKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKYSHVDLVVMVDGF
EGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRSLRSRGYTPIYTPFFMRKEVMQEVAQL
SQFDEELYKVIGKSSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTC
FRQEVGSHGRDTRGIFRVHQFEKIEQFVFSSPHDNKSWEMFEEMIATAEEFYQSLGIPYH
IVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKR
KNNLPLSAQNKLEATSSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKGIIVPEKL
KEFMPQGLQELIPFVKPAPIDQEPSKKQKKQHEGSKKKTGRDVILESQMQNLEVADA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggatctggatttgtttcgtgtggataaagggggtgacccagccctgatccgg
gagtcgcaggagaagcgtttcaaggacccgggacttgtggaccagctggtgaaggcagac
agcgagtggagacgatgcagatttcgagcagacaacttaaacaagctgaagaatctatgc
agcaagacaattggagaaaaaatgaagaaaaaagaaccagtgggtgatgacgagtccatt
ccagagaatgtgttgaatttcgatgatgtcactgcagacactttagctaacctgaaagtc
tcacaaatcaaaaaagtccgactccttatcgatgaagccatcctgaagtgtgatacagag
cgcctcaagctggaagcagagcgtttcgagaacctcagagaaattgggaaccttctacac
ccatctgtgcccatcagtaatgatgaggatgcagacaacaaagtagagaggatatggggt
gactgtacggtcaggaagaagtactctcacgtggacctggtagtgatggtagatggcttt
gaaggcgagaagggagccgtggtggctgggagtcgaggctacttcctgaagggggtcctc
gtgttcctggaacaggctctcatccagtacgcccttcgctccctgagaagccggggctac
actcccatttacaccccctttttcatgaggaaggaggtcatgcaggaggtggcacagctc
agccagtttgacgaggaactttataaggtgattggcaaaagcagtgaaaagtccgatgac
aactcctacgatgaaaagtacctaattgccacctcggaacaacccattgctgctctgcat
cgggatgagtggctgaggccggaggacctgcccatcaagtatgctggcctgtctacttgc
ttccgccaggaggtgggctcccacggccgtgatacccggggcatcttccgagtccaccag
tttgagaagattgagcagtttgtgttctcgtcaccccatgacaacaagtcatgggagatg
tttgaagagatgattgccaccgctgaagagttctaccagtctctggggatcccataccac
atcgtgaacattgtctcaggatctttgaatcatgctgccagtaagaagcttgacctggag
gcctggtttccaggctctggagcctttcgcgagttagtctcctgttctaactgcacagat
taccaagctcgcagactccggatacgctacgggcagaccaagaagatgatggacaagaga
aagaataatctccctttatctgcacagaacaagttggaggcaacgtcttccctcttctca
cccaagaaggtggaatttgttcacatgctcaatgcaacaatgtgtgccactactcgtacc
atctgtgccatcctggagaactaccagacagagaaaggcatcattgtgcccgagaagctg
aaagagttcatgccacaaggactccaggaattgattcccttcgtgaagcctgcacccatt
gaccaggagccatcgaaaaagcaaaagaagcagcacgaaggtagcaaaaagaagacgggc
agagatgtcatcctggaatcccagatgcagaacctggaggtggctgacgcctga
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