Ochotona curzoniae (black-lipped pika): 121168441
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Entry
121168441 CDS
T11174
Symbol
SEMA6C
Name
(RefSeq) semaphorin-6C
KO
K06842
semaphorin 6
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
121168441 (SEMA6C)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
121168441
NCBI-ProteinID:
XP_040854493
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MPRAPHLMPLLLLLLLLLTPPQARAVFPQDPLPLLTSDLRGSSPSSWFRGLEEDAVAAEL
GLDFQRFLTLNRTLLVAARDHVFSFDLQAQEEREGLVPNKYLTWRSQDVENCALRGKLTD
ECYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVA
IFAEGSLYSATAADFQASDAVVYRSLGSQPPLRSAKYDSKWLREPHFVQALEHGDHVYFF
FREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDV
LQALTGPVNLHGRTALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTP
VSEDRVPSPRPGSCAGVGGAALFSSSRDFPDDVLIFIKAHPLLDPAVPPATHQPLLTLTS
RALLTQVAVDGMAGPHSNTTVLFLGSHDGTVLKVLPPGGPAGRPEPVFLEEIDAYSPSRC
GGKRAVQTARRIIGLELDTESHRLFVAFAGCIVHLPLSRCARHGACRRSCLASQDPYCGW
HSSRGCVDIRGGGMDVDWVGSQDSTEHCQDGATGSQSGPGNSAYVLLGPGPAPETPSPPS
DAHPRPQSSTLGAHTQGVRRDLPPASAARSVPIPLLLASVAAAFALGASVSGLLVSCACR
RAHRRRRSKDIETPGLPRPLSLRSLARLHGGGGGGPEPPPPGKDGAVAQTPQLYSTFLPP
PEAVPLPPPELACLPTPESTPELPAKHHRVAGGPWEWNQNGNNAKEGPGRARGGNAAGMP
APRVLVRPPPPGCPGQAVEVTTLEELLRYLHGQQAPRKEAEPPAPAPFTSRPLPPEPVAT
TPALFADPSPLARECSPPLRLDIPPEGKGTVPAARPALSAPAPRLGVGGGRRLPFSSHRT
PPALLTRVPSGGSSRYSGGPGRHLLYLGRPEGYRGRAPKRVDMDKSPLSPKPALLGPSHQ
AVPNGSHFNF
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtgctccccacctcatgcccttgctgctgctgctgctgctgctgctgacacct
ccccaggcccgggccgtctttcctcaggatccactccctttgttgacctctgatcttcga
ggttcttccccgtcatcctggttccggggcctggaggaagatgctgtggctgcagaactt
gggctggactttcagcgattcctcactttgaaccggaccctgctggtggctgcccgggat
cacgtcttctccttcgaccttcaagcccaagaagaaagggagggcctggtgcccaacaag
tatctaacatggcggagtcaggatgtggagaactgtgccttgcggggaaagctgacggac
gagtgttacaactacatccgtgtccttgttccttgggactcccagacgctcctggcctgt
ggaacgaactcattcagccccgtgtgccgcagctatgggataacttcgctgcagcaggag
ggcgaggagctgagtgggcaggctcggtgcccatttgatgccacccagtccaacgtggcc
atctttgcagagggcagtctatactcagccacagcggcagatttccaggccagcgatgct
gtggtttacagaagcctggggtctcagcccccactccgctccgccaagtacgactccaag
tggctccgagagccgcatttcgtccaagctttggagcacggagaccacgtctatttcttc
ttccgagaggtctccgtggaagatgcccggctgggaagggtgcagttctccagagttgct
cgcgtttgtaaacgtgacatgggcggctctccgcgggccttggaccgccactggacgtcc
ttcctgaagctgcggctcaactgctcggtccctggggactccaccttctactttgatgtc
ctgcaggccttgaccgggcctgtgaacctgcatggccgcacagcgctctttggagtcttc
accacccagaccaacagcatccctggctctgcagtctgtgccttctacctggatgacatt
gagcgtgggtttgagggcaagttcaaggagcagaggagtctggatggggcctggacccct
gtgtctgaggacagggtgccctcacccaggcctggctcctgtgcaggcgtgggtggagct
gccttgttctcctcttctcgagacttccctgatgatgtcctgatcttcatcaaggctcac
ccacttctggaccctgctgtgccacctgccacccatcagccactcctcaccctcaccagc
agggccctactgacccaggtagctgtggatggcatggctggtccccacagtaacaccact
gtcctgttcctcggctcccatgatgggacagtgctgaaggtgctgcccccggggggccca
gccgggagacccgagcctgtcttcctggaagagattgacgcctacagcccctcccggtgc
ggtgggaagcgggcagtgcagacagcacggcggattatcgggttggagctggacactgag
agccaccggctctttgtggcctttgctggctgtatcgttcacctcccactcagccggtgt
gctcggcacggggcctgccgcaggagttgcctggcttctcaggacccatactgtggctgg
catagctccaggggctgtgtggacatccgaggtggtgggatggatgtggactgggttggg
agccaggactccacagaacactgccaagatggagccacaggaagccagtctggccctgga
aactcagcttatgtgcttctgggtcctggccctgcccctgagacccccagtccccccagt
gatgcccacccccggccccagtcttccactcttggagctcacactcagggcgtgcgccgg
gacctccccccagcctcggccgcccgttccgtccccatcccactccttctggccagcgtg
gctgccgccttcgccctgggcgcctcagtctcgggcctcctggtttcctgcgcttgtcgc
cgcgcccaccgacgacgtcgaagcaaggacatcgagactcccgggcttccgcgcccgctc
tcccttcgcagtctggcccggctgcatggcggcggtggcggtggcccggagcccccgccg
ccgggcaaggacggagccgtcgcgcagacgccacagctctacagcacctttctgccaccg
cccgaggctgtgcccctgcccccgcccgagctggcctgcctgcccaccccggagtccacg
cccgagctgcccgccaagcaccaccgcgtcgccggggggccctgggagtggaaccagaac
ggcaacaacgccaaggagggtccgggccgcgcgcggggcgggaacgcggcgggcatgccc
gcgccgcgcgtgctcgtgaggccgccgccgccaggctgtcccgggcaggcggtggaggtc
accaccctggaggaactgctgcgctacctgcacggccagcaggcgccccgcaaggaggcc
gagccaccggccccggccccgtttacctcgcggccgcttccgcccgagcctgtggccacc
acccccgcgctctttgcagaccccagccccctagcccgggaatgcagcccacccctgagg
ctggacatccccccggagggcaagggcacggtccccgcagcccggccagcgctctcggcc
cccgccccgcgcctcggggtcgggggtggccgcaggttgcccttctccagccaccgcacg
ccccctgccctgctcacgcgggtgccctccgggggctcctccaggtactcagggggtccc
ggcaggcacctcctgtacctgggccggcctgagggctaccgaggccgcgccccgaagaga
gtggacatggacaaatccccgttgtcgccgaagccggctctcctcgggccctctcaccag
gccgtccctaacggcagccattttaacttttga
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