Ochotona curzoniae (black-lipped pika): 121168575
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Entry
121168575 CDS
T11174
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04613
Neutrophil extracellular trap formation
ocz05014
Amyotrophic lateral sclerosis
ocz05034
Alcoholism
ocz05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
121168575 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
121168575 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121168575 (HDAC6)
09165 Substance dependence
05034 Alcoholism
121168575 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocz01009
]
121168575 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121168575 (HDAC6)
04131 Membrane trafficking [BR:
ocz04131
]
121168575 (HDAC6)
03036 Chromosome and associated proteins [BR:
ocz03036
]
121168575 (HDAC6)
Enzymes [BR:
ocz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121168575 (HDAC6)
Protein phosphatases and associated proteins [BR:
ocz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121168575 (HDAC6)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121168575 (HDAC6)
Membrane trafficking [BR:
ocz04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
121168575 (HDAC6)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
121168575 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
121168575
NCBI-ProteinID:
XP_040854769
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MTSTGPEHNITRSRRIRQTPQPPPHDSSGTPKRNVKKGAVPRCSPNLLEIKKRGKMKKLS
QAAEDYLIAGLQDLDLDSDTRIPTGTGLVFDEQLNEFHCLWDDSFPESPERLHAIKEQLI
QEGLLDRCVSFQARFAEKDELMLVHSPEFIELMESTQHMKESELRVLADTYDSVYLHPNS
YSCACLASGSVLRLVDAVLASEIRNGMAIIRPPGHHAQHSLMDGYCMFNHIAVAARYAQQ
KHGVHRVLIVDWDVHHGQGTQFMFDQDPSVLYFSIHRYEQGRFWPHLPAANWSTIGFGQG
QGYTINVPWNQVGMRDADYIAAFLHILLPVAFEFRPQLVLVAAGFDALLGDPKGEMAATP
AGFAQLTHLLMGLAGGRLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLVSPGIPCRSA
QNSLSCTLGAIEPFWEFLLRPVEIIEEDIMEEDSMEESEESELWEPPVLPMLTWPVLPAR
TGLIYDQRMMSHCNLWDNHHPETPQRILRIMCHLEELGLAGRCLILPARPATDVELLTCH
SAEYVERIRATESMKTRELHREGANFDSIYICPNTFSCAQLATGTVCRLVEAVMEGEVLN
GVALVRPPGHHAERNAACGFCFFNSVAVAARHAQAISGRALRILIVDWDIHHGNGTQHIF
ENDPSVLYISLHRYDQGSFFPVGDEGSCNRIGRGAGTGFTVNVGWNTSRIGDSDYLMAWH
RLVLPIAYEFNPELVLVSAGFDAARGDPLGGCHVSPECYAHLTHQLMGLAGGRIILVLEG
GYNLTSISESMAACTRSLLGDPLPVLALSRAPQLSALTSVTETIQAHRKYWRSLWITKIE
DKEGMYSFKSATKKASKPTKPTRPINPAPVERMTPAVKKLLEAGMGRATSSLSAVKSIPA
QTESKTSVMSTEAQASQAATGLATLYQTTSEATMGGAMMEQTTWESATGVATPDQTTSEE
AVGGALLDQTTSEVSMGETILDKIISEEVVKEDKLKQTTSEEAVGAAKLIQTPLGSSTDK
QTPPTSPVPGATPQLSPSQLAGSLRTLELGSEPQKTSEPQPPEEEGLLAEAAGGRDVDDA
KLMQGAGGLAETNQAMFYAVTPMSWCPHLVAVSPIPASGLDVTQKCQDCGTPKENWVCLS
CYKVYCSRFINAHMVQHHEASGHPLVLSYVDLSVWCYPCQAYVHHQALLDVKNTVHQNKF
GVDIPHPH
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgacctccactggcccggagcacaacatcaccaggtcccgaaggattagacagacccct
cagccaccccctcatgactccagcggcaccccgaaacgaaatgttaagaagggtgctgtg
cctcgctgcagtcctaatctgctggaaatcaagaaaagaggcaaaatgaagaaactcagc
caggcagcggaagactacctgattgctgggctacaagacctggatttggactccgatacc
aggataccaactggcaccggcttagtgtttgatgaacagctaaacgagttccactgtctc
tgggatgacagttttccagaaagccctgagcggctccatgccatcaaggaacagctaatt
caggaaggtctcctggaccgctgtgtgtcatttcaggcccggtttgctgaaaaggatgag
ctgatgttggttcacagcccagaattcattgagctgatggaatcaactcagcacatgaaa
gaaagtgaactccgtgtcctagcagatacctatgactctgtttatctgcatccgaactcc
tactcctgtgcctgcctggcttcaggctccgtcctcaggcttgtggacgcagtcttggct
tctgagattcggaatggcatggccatcatcaggccccccggacaccatgcccagcacagt
ctaatggatggatattgcatgttcaatcacattgcggtggctgctcgttatgcccaacaa
aaacatggcgtacacagagtcctcattgtggactgggacgtacaccatggtcaaggaaca
cagttcatgtttgatcaggaccccagtgttctgtatttctccattcatcgctacgagcaa
ggtcgattctggccccatcttccagccgctaactggtccaccataggtttcggccaaggc
caaggatacaccatcaatgtgccttggaaccaggttggcatgcgtgatgctgactacatt
gctgcttttctgcatatcctgctgccagtcgcctttgagttccgacctcagctggtcctt
gttgcagctggatttgatgctctcctaggggatcccaagggcgagatggccgccacccca
gctgggtttgcccagctaactcatctgcttatgggtctggcaggaggcaggctgatcctc
tctctggagggtggctataatctccgttccctggctgagggtgtcagcgcctcgctccac
actttgctgggagacccttgccccatgctggtgtcccctggtattccctgccgaagtgcc
cagaattcactctcctgtactctgggagccattgagcctttctgggaatttcttctgaga
ccagttgagatcatcgaggaggacatcatggaagaggacagcatggaggagagtgaggaa
tctgaactctgggagccacctgtgttgccaatgctgacatggccagtgctgccggctcgc
acagggctgatctatgaccagcgaatgatgagtcactgcaacttatgggacaaccaccat
ccagagacaccccaacgtatcttgcggatcatgtgccatctggaggagctgggtcttgct
ggacgctgtctcatcctgcctgcgcgtcccgccacagatgttgaactgctcacctgccac
agtgctgagtacgtggagcgcattcgagccacagagagtatgaagacccgtgaactgcat
cgtgagggtgccaattttgactccatctacatctgccccaacaccttcagctgtgcacag
cttgccactggcaccgtctgtcgcctcgtggaggctgtgatggaaggagaggttttgaat
ggtgttgcgctggtgcgccccccaggacaccatgccgagcgaaatgctgcatgtggtttc
tgcttttttaactccgtggctgtggctgctcgccatgcccaggccatcagtgggcgtgcc
ctgcggatcttgattgtggactgggacatccatcatggtaatggaactcagcacattttt
gagaatgatcccagtgtgctctacatatccctgcaccgttatgatcaaggctctttcttc
cccgtgggggatgagggctcctgcaaccgcataggcaggggtgcaggcacaggcttcact
gtcaacgtgggctggaatacctcccgcataggggattctgactacctgatggcctggcat
cgtctggtgcttcccattgcatatgagtttaacccagaactggtactggtctcagctggc
tttgacgctgcacgaggggacccactggggggctgccatgtatcacctgagtgttacgca
catctcacccaccagctgatgggccttgccggtggccgcattatccttgtgctagagggt
ggctacaacctaacctccatctcagagtctatggctgcctgcacccgctcccttctcgga
gacccactgccagtgctggccctgtcacgggccccacagctgagcgccctgacctcagtc
actgaaaccatccaggcccatcgcaaatattggcgtagcttatggatcacaaagatagaa
gacaaggagggaatgtacagttttaaatcagctactaagaaggcatctaagccaactaaa
ccaactagaccaattaatcctgcaccagttgagaggatgaccccagcagtaaagaagctt
ctggaagcaggcatgggaagggcgacctcatcactgtctgcagtgaagtccattccagcc
cagactgaatcaaagacatctgtgatgagcactgaggcccaggcctcacaagcagccaca
gggttagccacgctgtaccagaccacctcagaagcaaccatgggaggagcgatgatggaa
cagaccacctgggaatcagccacaggggtagctacaccagaccagaccacctcagaggag
gctgtgggaggagccttactggaccagaccacctcagaggtttccatgggggaaaccata
ttggacaagatcatttcagaggaggttgtgaaagaagacaagctgaaacagaccacctca
gaggaggctgtgggggcagccaagctgatccaaactcctctaggctccagcacagataag
cagactcccccaacctcacctgtgccaggagccacaccccagctatctcccagccagctg
gctgggagcctcaggactctggaactaggcagtgaacctcagaaaacctcagaacctcag
cctccagaagaggagggcctactagcagaggcagctggaggtcgggatgtggatgatgcg
aaactgatgcagggagccgggggccttgctgaaactaaccaggctatgttttatgctgtg
acaccaatgtcctggtgtccccatttggtggcagtgtcccccatacccgcatcaggcctg
gatgtgactcaaaaatgtcaggactgtggaacacccaaggaaaactgggtgtgcttatct
tgctataaggtctactgcagtcgcttcatcaatgctcatatggtccaacaccatgaagcc
tctggacatccgctggttctcagctacgtcgacctgtcggtctggtgttatccgtgccag
gcctatgtccaccaccaggcgctcctagatgtgaagaacaccgtccaccagaacaagttt
ggggtggacataccccatccacattag
DBGET
integrated database retrieval system
