Ochotona curzoniae (black-lipped pika): 121168596
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Entry
121168596 CDS
T11174
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20 isoform X1
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocz03041
]
121168596 (DDX20)
Enzymes [BR:
ocz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121168596 (DDX20)
Spliceosome [BR:
ocz03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
121168596 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
121168596
NCBI-ProteinID:
XP_040854792
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MPAEESAVAADESAMPAEGPSARPARSLRTAHDLGGPRARTGDVLLAEPADFESLLLSRP
VLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILENLSTQ
ILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIK
QLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLAN
ALTKYMRDPTFVRLNSSDPSLLGLKQYYKVVNAYPLAHKIFEEKVQHLQELFSRVPFNQA
LVFSNLHSRAQHLADLLSSKGFPAECISGSMNQNQRLDAMAKLKQFHCRVLISTDLTSRG
IDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIAQKCNIN
LLLLPDPIPTGLMEECLDWDVEVKAAGHTQDLANTPAPPVKKQIQRTERTFHTPKKAPGG
HTASPRSTSVSALSVKSKNNTKQKLPVKSHSESGVVEKAVSPHEVECDAQPGEQMKNSAQ
APAENPTSHQQRVKEASPVSLPKIPCLSSFKIHQPCLLSFTELVEDYEHYIKEGLEKPVE
IIRHYTGPEDQTGNPQNGFVRNRMTDERVPVLASSGQSGDSESDSDSCSSRTSSQSKGNK
SHLEGCLDTQAKDWEFTPADDHVSLGQPLNGNEAPNLEEYQESPEIPLKTRYKEGACQRA
KQSRRNLPRRSSHRLHTEPQEGGWYESREPHPGYSDTYQNYEEYWRAYYRAWQEYYTTAS
QSYYWNAQRHPSLMRAYHMHTVYLQEMMRGNH
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgccggctgaggagagcgcggtggcggccgacgagagcgccatgccggccgaggggccg
agcgcccggcccgcgcggagcctgcggaccgctcacgacctcggcggccctcgggcccgc
accggggacgtgctgttggccgagccggcggacttcgagtcgctgctgctgtcgcggccc
gtgctggaggggctgcgggcggcgggcttcgagcgaccctcgccggtgcagctcaaggcc
atcccgctggggcgctgcgggctcgatttgattgttcaagctaaatctggcactgggaaa
acctgcgtgttctccaccattgccttggactcgctgatcctggaaaacctaagtacccag
attttgatcttggctcctacaagagaaattgctgtacagatacattctgttatcacagcc
attgggataaaaatggaaggtttagaatgtcatgtctttatcggagggaccccattatca
caggacaaaaccagacttaaaaagtgtcatattgctgttggatctcctggccgaattaag
cagctaatagaactggactacttgaacccaggcagtatacgtctctttattcttgatgaa
gcagacaaacttttagaagaaggcagcttccaggagcaaataaactggatttattcttcc
ttgcctgccagcaagcagatgttggctgtttcagctacttacccggaatttctggccaat
gctttgacgaagtacatgagggatcccacttttgtaagactgaattccagtgacccaagt
cttctaggtctgaagcagtattacaaagttgtcaatgcgtaccctttggctcataagatt
tttgaggaaaaggttcagcatttgcaggaactgttcagcagagttccgtttaatcaagcc
ttagtcttctctaatttgcatagcagagcacaacacttggctgacctcctttcttctaaa
ggctttcctgctgagtgcatttcaggcagcatgaatcagaatcaacgtcttgatgctatg
gctaaactgaagcagttccattgtagagtcctcatttctacagacttgacttcccgtggg
attgatgccgagaaggtgaatctcgttgtaaatctggatgtaccattggattgggagacg
tacatgcatcggattggcagagctggtcgttttggtactttgggattgacggtaacctat
tgttgccggggagaagaagaaaatatgatgatgaaaattgcccagaaatgtaatatcaac
cttcttcttttaccagatcctattcctactggtctgatggaagaatgtttggattgggat
gtagaagttaaagctgctggccacactcaagacttagcaaacacacctgccccgcctgta
aagaagcaaattcagagaacggagagaacctttcatactccgaagaaagctcctggtggc
cacacggcttcccctagaagtacttctgtgtctgcgctatcagtcaaatccaaaaataac
actaagcaaaagcttcctgtgaaaagccactcagagagtggagtcgtagaaaaggcagtg
tctccacatgaagtggaatgtgatgcacagcctggagagcaaatgaagaattccgctcag
gcccctgcggagaaccccaccagccatcagcagcgggtcaaagaagcgtcacctgtgtca
ctccccaagattccctgtctgtcatcctttaaaatccaccagccatgcttgttgtccttt
acagaactggtagaggattacgaacactacattaaagaggggttggagaaacctgtggaa
attatcaggcactacacaggccctgaggatcaaactgggaaccctcagaatggttttgtg
agaaataggatgactgacgagagagtgccagtgctggcgagcagtggccagtctggagac
tctgagagtgacagtgactcttgtagctccaggacttcttcccagagcaaaggaaacaag
tcccatctggaaggctgtttggatactcaggcaaaagactgggaatttactcctgcagat
gaccatgtgtctttgggacaaccactgaatggaaatgaagcccccaacctagaggaatat
caagaatcccctgaaatcccactgaaaacaaggtataaagagggggcttgccagagagcg
aagcagagccggaggaacctgcccaggcgttcttcccatcgattgcacacggaacctcaa
gaaggtggttggtacgagagtagagaacctcatccaggttactctgacacctaccagaat
tatgaagagtactggcgagcctactacagggcatggcaagaatactacacgactgcctct
cagtcctattactggaacgctcagagacatccgagcttgatgcgagcctatcacatgcat
accgtgtatttacaagaaatgatgcgaggtaaccactga
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