Ochotona curzoniae (black-lipped pika): 121168696
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Entry
121168696 CDS
T11174
Symbol
ABCA4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121168696 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocz02000
]
121168696 (ABCA4)
Transporters [BR:
ocz02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
121168696 (ABCA4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_15
AAA_23
AAA_22
Motif
Other DBs
NCBI-GeneID:
121168696
NCBI-ProteinID:
XP_040854946
LinkDB
All DBs
Position
Unknown
AA seq
2313 aa
AA seq
DB search
MGFARQIQLLLWKNWTLRKRQKIRFAVELVWPLSLFLVLIWLRNANPLYSQHECHFPNKA
MPSAGMLPWLQGIFCNVNNPCFKNPTPGESPGIVSNYNNSILARVYRDFQELLRDAPESQ
HLGRVWTELRTLSQFMNTLRTHPERMAGKGIRVRDILKDEETLVLFLKRNIGLSDSVTHL
LVNSQVRPEQFAHGVPDLALKDIACSEALLIRFLIFSQRHGAQTVRGALCPLSQGTLQWM
EDTLYANVDFFKLFRVLPTLLDSSSEGIDLRSWGRILSDISPRIQEFVHQPSVQDLLWTT
RPLIQHNGPQSVMQLMAILANLLCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSARKDPVY
TYDKRTTSFCNALIQSLESNPLTKIAWRAAKPLLMGKILFTPDSPAARRILKNANSTFEE
LERLRKLVKAWEEVGPQIWYFFDKSPQMNMIRDTLRNPAVRDFLARQLGEESIAAEALLN
FLHEGPRESWADDTGSLHWMDLFNITDHTLRLVHRYLECLVLDKFESYDDEIQLTHRALS
LLEENRFWAGVVFPDMYPWTSSLPPHVKYKIRMDIDVVEKTNKIKDRYWDSGPRADPVED
FRYIWGGFAYLQDMVEQGITRSQAPAAAPLGVYLQQMPYPCFVDDSFMIILNRCFPIFMV
LAWIFSVSMTVKGIVLEKELRLKETLKNQGVSNAVIWCTWFLDSFCIMSMSIFLLTLFIM
HGRILHYSDPFILFLFLLAFSTATIMQCFLLSTFFSKASLAAACSGVIYFTLYLPHILCF
AWQDRLTAELKMAVSLLSPVAFGFGTEYLVRFEEQGLGLQWSNIANSPMEGDEFSFLLSM
KMMLLDAALYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPI
TEEMEDPGHPGGTKDSFFEREHPGLVPGVCVKNLVKVFEPFGRPAVDCLNITFYENQITA
FLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIETSLDAIRQSLGMCPQHNILFHHLTV
AEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGEA
KVVVLDEPTSGVDPYSRRSIWDLLLKYRPGRTIIMSTHHMDEADLLGDRIAIISQGRLYC
SGTPLFLKNCLGTGFYLTLVRRMKTMQSQGGCCEATCRCASRGVSRRCSARNNEMAFDQT
LDGDVDELVDVVCHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLS
SFGISDTPLEEIFLKVTEDADSGLFTGDPQHKRVPGSLRHPGLGSSEKAAAEGEAAQATA
PSEDPPSPDPEGVGVPLNRGTRLIVQQVQALLIKRFHHAVRSHKDFLAQIVLPATFVCLA
LMLSIIVPPFGEYPALTLHPWMYGQQYTFFSMDEPGSQPLTTLMDILLNKPGFGTRCLKE
EGTLDYSCGNSTPWKTPAVSPNITHILQKHTWTPDNPSPSCRCSTREKLTMLPECPEGAG
GLPPPQRTQRSGEVLQDLSNRNISDYLVKTYPALIRSSLKSKFWVNEQRYGGISIGGKLP
AVPVTGTTLVAFLSDLGHLMNVSGGPVTREAAKDMADFLKHLETEDNIKVWFNNKGWHAL
VSFLNVAHNAILRASLHQDRNPEEYGITAVSQPLNLTKEQLSEITVLTTSVDALVAICVI
FAMSFVPASFVLYLIQERVSKAKHLQFINGVSPTTYWLTNFLWDIMNYAVSAGLVVCIFI
GFQKKAYTSPDNLPALIALLMLYGWAVIPMMYPASFLFDIPSTAYVALSCANLFIGINSS
AITFILELFENNQTLLRFNAMLRKLLIVFPHFCLGRGLIDLALSQAVTDVYARFGEEHSA
NPFQWDMIGKNLVAMAAEGVVYFLLTLFIQHHFFLTRWIAEPVKEPIVDEDDDVAEERKR
ITSGRNKTDILRLNELTKIYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTG
DTTVTSGDATVAGKSILTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEI
GKVTNWCIQSLGLSLYVDRLAGTYSGGNKRKLSTAIALLGHPPLVLLDEPTTGMDPQARR
MLWNTIVSIIQEGRAVVLTSHSMEECEALCTRLAIMVRGTFQCLGTIQHLKYKFGDGYIV
TMKIRCPKDDVLPDLNPVEQFFQGNFPGSVQRERHYNMLQYQVSSSSLARIFQLLVSHKD
SLCIEEYSVTQTTLDQVFVNFAKQQTEIHDLPLHPRAAGANQQAKRPGSQNCLCGHVSIE
GLLAEIVQAVFLDRSSVAVIDSSQKLVFEDHLP
NT seq
6942 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgccaggcagatacagctcttgctctggaagaactggaccctgcggaagagg
caaaagattcgctttgcggtggaactggtgtggcctttatccttatttctggtcttgatc
tggctaaggaatgccaacccgctctacagtcaacatgaatgccattttcccaacaaggcg
atgccctcagcaggaatgctgccgtggctccaggggattttctgcaatgtgaacaatccc
tgttttaaaaatcccaccccaggggaatctcctggaattgtgtccaactataacaactcc
atcttggcaagggtgtatcgagattttcaagaactcctcagggacgcaccagagagccag
caccttggccgtgtttggacagagctccgcaccttgtcccagttcatgaacaccctgagg
actcacccagagagaatggcaggaaaaggaatacgagttcgggatatcttgaaagatgaa
gagacattggtgttatttctcaagaggaacattggcctgtctgactcagtgactcacctt
ctggtcaactcccaagtccgtccagagcagtttgctcatggagtcccagacctggcactg
aaggacatcgcctgcagcgaggccctgctgatacgcttcctcatcttcagccagcggcat
ggcgctcagactgtgcgaggagccctgtgtcccctctcccagggcaccctgcagtggatg
gaggacacgctgtatgccaatgtggacttcttcaagctcttccgcgtgctacccactctc
ctagacagcagttctgaaggtatcgatctgagatcctggggaagaatattatcagacata
tcacccagaattcaagaatttgtccatcagccgagcgtgcaagacttactgtggacaacc
aggcccctcatacaacacaacgggccccagagcgtcatgcagctgatggccatcctggcc
aacctgctgtgtggctaccccgagggaggaggctctcgtgtgttctccttcaactggtat
gaagacaacaactataaggccttcctgggcattgactctgccaggaaagatcctgtctac
acctatgacaaaagaacaacatccttttgcaatgcattgatccagagcctggagtcaaac
cctttaaccaaaatagcctggagggcagcaaagcctctgctgatgggaaaaatccttttc
actcctgattccccagcagcgcgaaggattctcaagaatgccaactcaaccttcgaagaa
ctggagcgccttaggaagctggtcaaagcctgggaagaagtagggccccagatctggtac
ttctttgacaagagcccacagatgaacatgatccgagacacgttgcggaacccagcagtg
agagacttcctggctaggcagcttggcgaagaaagcattgctgccgaagccctgcttaat
ttcctccacgaagggcctcgagagagctgggctgatgacacgggcagcttgcactggatg
gatctcttcaacatcactgaccacacactacgcctagtgcaccgatacctggagtgtttg
gtcctggataagtttgagagctacgatgacgaaattcagctcacccaccgggccctgtcc
ctgctggaggagaacaggttctgggctggtgtggtattcccagacatgtatccctggacc
agttccctgccaccccacgtcaagtacaagattcggatggacatcgatgtggtggagaag
accaacaagatcaaagacaggtactgggattctgggccccgagctgatcccgtggaagac
ttccgctacatctggggaggctttgcctatctgcaggacatggtggaacaggggatcaca
aggagtcaggcccccgcagcagcaccacttggcgtttacctgcagcagatgccctacccc
tgcttcgtggacgactcttttatgatcatcctgaaccgctgtttccctatcttcatggtg
ctggcgtggattttctctgtctccatgacagtcaagggcatcgtcttggaaaaggaactg
agattgaaagagaccttaaaaaaccagggtgtctccaacgcggtgatttggtgcacgtgg
ttcctggacagcttctgtattatgtcaatgagcatcttcctgctgacactgttcatcatg
catgggagaatcctgcactacagcgatccgttcatcctcttcctgttcctactggctttc
tccacggccacaatcatgcagtgcttcctgcttagcaccttcttctccaaggccagcctg
gcagcagcctgcagtggcgtcatctacttcaccctctacctgccccatatcctgtgcttc
gcctggcaggaccgtctgacagcagagctgaagatggccgtgagtctgctttctcctgta
gcctttgggtttggcactgagtacctggttcgctttgaagagcaaggtctggggctgcag
tggagcaacattgcgaacagtcccatggaaggggatgaattcagcttcctgctctccatg
aagatgatgctccttgatgctgctctgtatggcttgcttgcttggtacctggaccaggtg
ttcccaggagactatggcaccccacttccttggtacttccttctacaagagtcctattgg
cttggtggtgaagggtgttcaaccagagaggaaagagccctggaaaagacagagcccatc
acagaggagatggaagatccgggacacccaggaggaacaaaagactccttctttgaacgt
gagcatccaggcttggttcctggggtgtgtgtgaagaacctggtgaaggtttttgagccc
tttggccggccagctgtggactgccttaacatcaccttctatgagaaccagatcactgcc
ttccttgggcacaacggagccgggaagaccaccaccttgtccatcctgacgggtctgttg
ccaccaacatcggggacggtgctcgttggggggaaggacattgaaaccagcctggatgcc
atccggcagagcctcgggatgtgtccacagcacaacatcctcttccatcacctcacagtg
gcagagcacatcctgttctatgcacaactgaaggggaggtcctgggaggaggcccagctg
gagatggaagccatgctagaggacacaggcctccaccacaagaggaacgaggaagcccaa
gatctctcaggtggcatgcagaggaagctgtccgtcgccattgcctttgtgggagaggct
aaggtggttgtcctggacgagcccacctctggggtggacccctactctagacgctccatc
tgggatctgctcctgaaataccgcccaggcaggaccatcatcatgtccactcaccatatg
gacgaggcagaccttcttggggaccgcatcgccatcatctcccaagggaggctctactgc
tcaggcacgcccctcttcctcaagaactgcctcggcacgggcttctacttgactttggtg
cgcaggatgaagaccatgcagagccaaggcggctgctgtgaggccacctgccgctgtgca
tccaggggcgtctcccgcaggtgttcggcccgcaacaacgagatggcctttgatcaaaca
ctggatggggatgtggatgagctggtggacgtggtttgccaccacgttccagaggccaag
ctggtggaatgcatcggtcaagagctgatcttcctgcttccaaataagaatttcaagcag
agagcatatgccagcctcttccgagaactggaggagacgctggctgacctggggctcagc
agctttggaatttctgacactcccctggaagagatttttctgaaggtcacagaggatgct
gattcgggcctgtttactggtgaccctcagcataaaagggtgcccggcagcctacggcat
cccggtttgggttccagcgagaaggcggcagcagagggagaggctgcccaggccacagcc
ccctccgaggacccaccctccccagatcctgagggcgtcggtgtccctctcaacaggggc
acgcgactcatcgtgcagcaggtgcaggcgctgttgatcaagcgcttccaccatgctgtc
cgcagccacaaggactttctggctcagattgttctcccagccacattcgtgtgtctggcc
ctgatgctgtccatcattgtgcctccttttggtgaataccccgccttgacccttcacccc
tggatgtacgggcagcagtacaccttcttcagcatggacgagccaggcagccagcccctc
accaccctgatggacatcctcctgaacaagccaggctttggcacccgctgtctgaaggaa
gaggggaccctggactattcctgtggcaactcaaccccctggaagactcctgctgtgtcc
ccgaacatcacccatatcctccagaagcacacttggactccagacaatccctcaccttcg
tgcaggtgcagcaccagggagaagctcaccatgctgcccgagtgcccagagggtgctggg
ggtctgccgcccccacagagaacacagcgcagtggagaagtcctccaggaccttagcaac
aggaacatctccgactacttggtgaagacgtatcctgcgctcataagaagcagcttgaag
agcaaattctgggtcaacgaacagaggtatggagggatctccatcggaggaaagctcccg
gcagtccctgtcaccgggacaacacttgttgctttcttaagcgaccttggccatttaatg
aatgtgagcgggggccctgtcaccagagaggctgctaaagacatggctgattttcttaaa
catctggaaacagaagacaacattaaggtgtggtttaacaacaaaggctggcacgccctg
gtcagctttctgaacgtggcccacaatgccatcctacgagccagcctgcaccaggacagg
aaccctgaggagtatggcatcacagctgtcagccagccgctgaacctgaccaaggagcag
ctctcagagatcacagtactgaccacttcagtggatgccttggttgccatctgcgtgatt
tttgccatgtccttcgttcctgccagcttcgtcctttatttgatccaggagagagtaagc
aaagccaagcacctccagtttatcaacggcgtgagccccactacctactggcttaccaac
ttcctctgggacattatgaattatgccgtgagtgctggcctggtggtgtgcatcttcatt
gggtttcagaagaaagcttacacttctccagacaaccttcctgccctcattgcactactc
atgctgtacgggtgggcagtcatccccatgatgtacccggcatccttcctgtttgatatc
cccagcacagcttacgtggctctgtcctgtgcaaatctgttcatcggcatcaacagcagt
gccatcaccttcatcttggaactgtttgagaataaccagacgctgctcaggttcaacgcc
atgctacggaagctgctcattgtcttcccccatttctgcctgggccggggcctcattgac
ctggcactgagccaggctgtgacggacgtctatgcccggttcggggaggagcactctgca
aatccgttccagtgggacatgattgggaagaacctggttgccatggcagcagaaggagtt
gtgtatttcctcctgacgctcttcatccagcaccacttcttcctcacccgctggattgct
gagcctgtgaaggagcccattgttgacgaagatgacgacgtggctgaagaaagaaaaagg
attaccagtggaagaaataaaactgatatcttaaggttaaatgaactaaccaagatttat
tcaggcacctccagcccggcagtggataggctgtgtgtgggagtccgccctggagagtgc
tttggcctcctgggagtcaatggtgccggcaaaacaaccacattcaagatgctcacaggt
gacaccacagtgacctcaggtgatgccaccgtagcgggcaaaagtatcttaaccaacatt
tccgacgtccaccagaatatgggctactgccctcagtttgatgcgatcgatgacctgctc
acgggccgagaacatctttacctttacgcccggctccgaggggtaccagcagaagaaatt
ggaaaggttacaaactggtgcattcagagcctgggcttgtccctctacgtggaccgcctg
gccggcacatacagcgggggcaacaagcggaagctctccactgccatcgcactccttgga
cacccgccactggtgctgctggatgagcccaccacagggatggatccccaggcacgccgc
atgctgtggaacaccattgtgagcatcatccaagaagggagagccgtggtcctcacatcc
cacagcatggaagagtgtgaggcactgtgcacccggctggccatcatggtgaggggcact
tttcagtgtctgggcaccattcagcacctcaagtacaagtttggagatggctacattgtc
acaatgaaaatcagatgcccaaaggatgatgtgcttccagacctgaatcccgtggagcag
ttcttccaggggaacttcccaggcagcgtgcagagggagaggcattacaacatgctccag
taccaggtctcctcctcctccctggccaggatcttccagctgctcgtctcccacaaggac
agtctgtgcatcgaggagtactcagtcacacagaccacactggaccaggtgtttgtgaac
tttgctaagcagcagactgaaattcatgacctacctctgcaccctcgagctgctggagcc
aaccaacaagccaagagaccgggcagtcagaactgcctatgtggacatgtgtccatagaa
ggtttacttgctgaaattgttcaggcagttttccttgatagatcctcagttgctgtcatt
gatagcagtcaaaaattagtctttgaggatcacttgccttga
DBGET
integrated database retrieval system
