Ochotona curzoniae (black-lipped pika): 121169019
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Entry
121169019 CDS
T11174
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121169019 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocz03000
]
121169019 (ATRX)
03036 Chromosome and associated proteins [BR:
ocz03036
]
121169019 (ATRX)
Transcription factors [BR:
ocz03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121169019 (ATRX)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121169019 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
121169019
NCBI-ProteinID:
XP_040855367
LinkDB
All DBs
Position
Unknown
AA seq
2466 aa
AA seq
DB search
MTAEPMSESKLNTLVQKLHDFLAQSEESEETSSPPPRPAMNQSIDKTSGSGNNSDMMEKS
REEGPSSSEKSRSSGLSRSKRKPSIVTKYVESDDETVNEDASNENSENDITMQSLPKGTV
IVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVSCTACGQQVNHFQKDSI
YRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILR
NLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKKKIKVDSEKSN
KVYDHTSRFSPKKNSSNCNGEEKKLDDSCSGSVTYSYSALIVPKELIKKTKKLIETTANM
NSSYVKFLKQATENSEINAATKLRQLKAFKSVLADIKKAHLALEEDLNSEIQALDSVNRE
KNAKEHKVIDTKSETKVRKGEKPCALERKDISTSDAKLSSKPVDSEHVDSSIPTEEQRTN
KSISGEHKKSDRKEEPQYEPTNTAEDLDMDIVSVPSSVPEDIFENPENAMDVHCTGGYQG
DGNSGTEQDLARSPVKLNIPSKDNRRGIKSKTTAKVTKELYVKLTPVSLSNSPVKGADYQ
DVPHDKDGYKSSSMNPKSEKYGPVQESSDSYEPLVENEVLLPSEESDLRRSPRVKTTPLR
RQTETNPATSNSDEELSVSMRKKDKRNSSDNSVDNPKPTKLAKSKQPELVDPSSDSDEML
AVLKEASRMSHSSSDTDINEVHTNHKTLYDLKTQKGKDDKGKRKRKSSTSGSDFDTKKGK
SAKNALMSKKKRQNLSDSSNYDSELEKEIKSMSKIGAAKTTKKRVPNKIEDSSEDEIHSK
RGIEGQKEGSSNDVEKKQETENLSSAESIVNDKTLTDFKDPISKNQQPNVSSDGADKPVS
AKEESLNSPVDKKAAEGKEKSKRLKSKTCKKVQGSLSDVADKYTRKEQSDESSEEDKKQS
KRGSEEKEKRITDIKKKVIKMALQDESSSDGMEKSHEGEDSCHFLKGIKENKNSITDGEK
KSKKVQEKTSKKKEELPDTVEKLPGKGDSDSLEDKKSKNGASRRAKRRSSLSEKSSRKRQ
ECSSSDTEKYSMKEDGCDSSDKRLRRIELRERRNLNSKRNTKEIQIGSSSSDAEESSEDS
KKQKRQRTAAKMKGGNHKDKKRNSVRISTKRKQADITSSSSSDIGEDNQNSVGEGSSDEQ
KIKPVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDDDDDNDPENRIAKKMLLEEIKANL
SSDEEGSSDDEPEPEEGKKRIGKQNEENQGDEAAKHQVNSESDSDSEESKKPRYRHRLLR
HKISVSDGESGEEKKTKPKDHKEVKSRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRP
RTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEAEEKEEEDEEEEEEDENDD
SKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPT
KCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGSG
CILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDEE
KLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALV
DPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENL
LGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPP
KHEYVLAVRMTPIQCKLYQYYLDHLTAGVGNSTEGGRGKAGAKLFQDFQMLSRIWTHPWC
LQLDYISKENKGYFDEDSMDEFIASDSDESSMSLSSDDYTKKKKTKGKKGKKDSSSSGSG
SDNDVEVIKVWNSRSRGGGEGNVDETGSNPSVSLKLEESKATSSSNPSSPAPDWYKDFVT
DADAEILEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDK
PLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLV
AANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSF
RVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQIHKEH
IVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRFNIPTGTNLPPVTFSAQTP
YIPFNLAALSAMSNQQLEDLINQGREKVVEATNSVTAVRIQPLDDIISAIWKENMNLSEA
QVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRILMSRRLQQQYNQQQQQQMT
YQQATLSHLMMPKPPNLIMNPSNYQQIDMRGMYQSVAAGMQPPPLQRAPPPMRSKNPGPS
SQGKSM
NT seq
7401 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgagcccatgagtgaaagcaagttgaatacattggtgcagaagcttcatgac
ttcctggcacaatctgaagaatctgaagaaacaagctctcctcctccacgacctgcaatg
aaccaaagcatagataaaaccagtggttctggaaataattctgatatgatggaaaagagc
cgggaagagggacctagctcttcagaaaaatccagatcttcaggattgtcaagatcaaag
aggaaaccttcaattgtaacaaagtatgtagaatctgatgatgaaactgtaaatgaagat
gcttctaatgaaaattcagaaaatgatattactatgcaaagtttgcccaaaggtacagtg
attgtacaaccagagccagtgctgaatgaagacaaagatgattttaaagggcctgaattt
agaagcagaagtaaaatgaaaactgaaaatctcaaaaaacgcggagaagatgggcttcat
gggattgtaagctgcacagcttgtggacaacaggtcaaccattttcaaaaagattccatt
tatagacacccttcactgcaagtccttatttgtaagaattgctttaagtattacatgagt
gatgatattagccgtgactcagatggaatggatgaacaatgtagatggtgtgcagaaggt
ggaaacttgatttgttgtgacttttgccataatgccttttgcaagaaatgtattctgcgc
aaccttggtcgaaaggagctatctacaataatggatgaaaacaaccagtggtattgctat
atttgtcacccagagcctttgttggacttggtcactgcatgtaacagcgtatttgagaat
ttagaacaattattgcaacaaaataagaagaaaataaaagttgatagtgaaaagagtaat
aaagtatatgaccatacatctagattttctccaaagaaaaatagttcaaattgtaatgga
gaagaaaagaaattagatgattcgtgttctggttctgtaacctactcttactcagcacta
attgtgcccaaagagttgattaagaaaacaaaaaaactaattgagaccacagccaacatg
aactctagttatgttaaatttttaaagcaagcgactgaaaattcagaaatcaatgctgct
acaaagttacggcaacttaaggcttttaaatctgtattggctgatattaagaaggctcat
cttgcattagaagaagatttgaattcagagattcaagctttggacagtgttaacagagag
aaaaatgccaaagagcacaaggtcatagatactaagtctgaaacaaaagtacgaaaagga
gaaaaaccctgtgctttggaaaggaaggacatttcaacgtcagacgctaaattgtcaagt
aaaccggttgatagtgagcacgtggattctagtattccaacagaggaacaaagaacgaac
aaaagcattagtggtgaacataagaagtctgatagaaaagaagaacctcaatatgaacca
actaacactgctgaagacttagatatggatattgtatctgttccttcttcagttccagaa
gacatatttgaaaatcccgagaatgctatggatgttcattgtacaggtggttatcaggga
gatggcaacagtggaactgagcaagacctggcgagatcacctgtaaaattgaatatccct
tcaaaagacaacagaagaggtattaaatcaaaaactacagctaaagtaacaaaagaatta
tatgtgaaactgacacctgtttccctttctaattccccagttaaaggtgctgattatcag
gatgttccacacgacaaagatggttataaaagttctagtatgaatcccaagtcagagaaa
tatggacctgtacaggaaagcagtgatagttatgagcctttggttgaaaatgaagttctg
ttaccttcagaagaatctgatcttcgaagatccccacgtgtgaagactacacccttgagg
cgacagacagaaaccaaccctgcaacatctaattcagatgaagaactttcagtttcaatg
agaaaaaaagataagagaaattcttctgataattctgtagataatcccaaacctactaaa
ttagctaaatctaagcaaccagagttggtggatcccagttcagactctgatgaaatgcta
gcagtcctcaaagaagcaagcagaatgagtcacagctcttctgatactgacattaatgaa
gtgcatacaaatcacaaaactttgtatgacttaaagactcaaaagggaaaagatgataaa
ggcaaaaggaaacgaaaaagttctacttctggctcagattttgatactaaaaaaggtaaa
tccgctaaaaatgctttgatgtctaaaaagaaacgacaaaacctgtctgattcttctaat
tacgactcagaattagaaaaagagataaagagcatgagtaaaattggggctgccaaaaca
accaaaaaaagagttccaaataaaatagaagattcttcagaagatgaaattcatagcaaa
agaggaatagaagggcagaaagaaggatcatcaaatgatgttgagaagaaacaggagaca
gagaatttgtcttcagcagaaagtatagttaatgacaagaccctcacagactttaaagat
cctatctctaaaaatcagcagccaaatgtttcctctgatggtgcagataagcctgtgtct
gccaaagaggagagtttgaattctccggtggataaaaaggctgctgaaggtaaagaaaag
agcaagcgtctgaaaagcaaaacttgtaagaaagtacagggtagcctatctgatgttgct
gacaaatacacacggaaagagcagagtgatgaatcttctgaggaagataaaaagcagagc
aaaagaggaagtgaagaaaaagaaaagagaattacagatattaagaaaaaagtgattaag
atggcactccaagatgaatcatcatctgatggcatggagaaatcgcatgagggagaagat
agttgtcattttctaaagggaataaaagaaaataaaaatagcataactgatggagaaaag
aaaagtaaaaaggtacaagagaaaacatccaaaaagaaggaagagttacctgatactgtt
gaaaagttaccagggaaaggggatagtgactccttagaagacaaaaagagtaagaatgga
gcatctcggagagctaagagaaggtccagtttgtctgaaaagagttcaaggaagagacaa
gagtgttcatcatctgatactgagaaatactcgatgaaagaagatggttgtgactcctct
gataagagactgagaagaatagaattaagggaaagaagaaacttaaattccaagagaaat
actaaggaaatccaaattggctcatcgtcttctgatgctgaagaaagttctgaagatagt
aagaagcagaagagacaaagaactgcagctaagatgaagggaggcaatcacaaggataaa
aaaagaaactccgtacgaataagcactaaaaggaaacaagcggacattacttcctcgtct
tcttctgatataggtgaagacaatcagaattctgtaggtgaaggcagtagtgatgagcag
aaaattaagccggtgactgaaaatttagtgctgtcttcacatactggattttgccagtct
tcaggagatgaagcattatctaaatcagtgcctgtcacagtggatgatgatgacgacgac
aatgatcctgagaatagaattgctaagaagatgcttttagaagaaataaaagccaatctt
tcctctgatgaggagggatcttcagatgatgaacctgaacctgaagaagggaaaaaaaga
attggaaaacaaaatgaagaaaatcaaggagatgaagcagcaaaacatcaagtcaattcg
gaatcagattcagattctgaagaatctaagaagcctagatacagacatagacttctgagg
cacaagatatctgtgagtgatggagaatctggagaagaaaaaaagacaaagcctaaagat
cataaagaagtcaaaagcagaaatagaaggaaagtgagtagtgaagattcagaagattct
gattttcaggaatcaggagttagtgaagaagttagtgaatctgaagatgaacaacgcccc
cgaacacggtcagcaaagaaagcagaacttgaagaaaatcagcgaagttataaacagaaa
aagaaaaggcgacgtattaaggttcaggaggattcatctagtgaaaataagagcaattct
gaggcagaagaaaaagaagaagaagatgaggaggaggaggaggaagatgaaaatgatgat
tctaagtctcctggaaaaggcagaaagaaaattcgtaaaattctaaaagatgataaatta
agaacagaaacacagaatgctcttaaagaagaggaagaaaggagaaagcgtattgctgag
agggaacgtgagagagaaaaattgagagaggtgatagaaattgaagatgcttcgcctacc
aagtgtccaataacaaccaagttggttttagatgaagatgaagaaactaaagagccttta
gtgcaggttcataggaatatggttatcaaattgaaaccccatcaagtagacggtgttcag
tttatgtgggattgctgttgtgaatctgtgaaaaaaacaaagaaatctccagggtcagga
tgtattcttgcccactgcatgggccttggtaagacattacaggtggttagtttccttcat
acagttcttttgtgtgacaaattggatttcagcacagctttagtggtttgtcctcttaat
actgctttaaattggatgaatgaattcgagaagtggcaagaaggattaaaagatgaagaa
aagcttgaggtctcagagttagcaactgtgaaacgtcctcaggaaagaagctatatgttg
cagaggtggcaagaagatggtggtgttatgattataggttatgagatgtatagaaatctt
gctcaaggaagaaatgtgaagagtcggaaactgaaagaaatatttaacaaagctttggtt
gatccaggccctgactttgttgtatgtgatgaaggtcatattttgaaaaatgaggcatca
gctgtttcaaaagctatgaattctatacgatcaaggaggagaattattttaacaggaaca
ccacttcagaataaccttattgaatatcactgcatggttaactttatcaaggaaaatttg
cttggatctattaaggagttcaggaatagattcataaatccaatccaaaatggtcagtgt
gcagattctaccatggtagatgtcagagtgatgaaaaaacgtgctcatattctctatgag
atgttagctggatgtgttcagaggaaagattatacagcattaacaaagttcttgcctcca
aaacatgaatatgtgttagctgtgagaatgactcctattcagtgcaagctttatcagtac
tacttagatcacttaacagcaggtgtaggtaatagcactgaaggtggaagaggaaaggca
ggtgcaaagcttttccaagattttcagatgttaagtagaatctggactcatccttggtgt
ttgcaattagactacatcagcaaagaaaataagggatattttgatgaagacagtatggat
gaatttatagcttcagattctgatgaaagttctatgagtttgagctccgatgattataca
aaaaagaagaaaacaaaggggaaaaaggggaagaaagatagtagctcaagtggaagtggc
agtgacaatgatgttgaagtaattaaagtgtggaattccaggtctcgaggaggtggtgaa
ggaaatgtggatgaaacaggaagcaacccttcagtttctttaaagcttgaagaaagtaaa
gctacttcctcttcgaatccaagcagcccagctcctgactggtacaaagattttgtcaca
gatgctgatgctgagattttggagcattctggaaaaatggtacttttgtttgaaattctt
cggatggcagaggaaattggagataaagtcctggttttcagccagtctctcatatctctg
gacttgattgaagattttcttgaattggctagtagagagaaaacagaagataaagataaa
cctcttatttataaaggtgaagggaaatggctcagaaacattgactactaccgtttagat
ggttctactactgcacagtcaaggaagaagtgggctgaagaatttaatgatgaaactaat
gtgagagggcgattgtttatcatttccaccaaagcaggatctcttggaattaatctggta
gctgctaatcgagtaattatatttgatgcttcttggaatccatcttatgatatccagagt
atattcagagtttatcgctttggacagactaagcctgtttatgtatataggttcttagct
cagggaaccatggaagataagatttatgatcggcaagtaactaagcagtcactctctttt
cgagttgttgatcagcagcaggttgagcgtcattttactatgaatgagcttactgaactt
tatacttttgagccagacttattagatgaccctaattcagaaaagaagaagaagagggat
actcccatgctaccaaaggacaccatactcgcagaacttcttcagatacataaagaacac
attgtaggatatcatgagcatgattctcttttggaccacaaagaagaagaagaattaact
gaagaagaaagaaaagcagcttgggcagagtatgaagctgagaagaagggcctgaccatg
cgtttcaacataccaactgggaccaatttaccccctgtcactttcagtgctcagactcct
tatattcctttcaatttggcagccttgtcagcaatgagtaatcaacagctggaggatctc
attaatcagggaagagaaaaagttgtggaagccacaaacagtgtgacagcagtgaggatt
cagcctcttgatgacataatttcagctatatggaaggaaaacatgaatctctcagaggcc
caagtacaggcattagcattaagtagacaagccagccaggagcttgatgttaaacgaaga
gaggcaatctacaatgacgttctgaccaaacaacagatgttaatcagctgtgttcagcga
atacttatgagccgaaggctccagcagcagtacaatcagcaacagcagcaacaaatgact
tatcagcaagcaacactgagtcacctcatgatgccaaagcctccaaatttaatcatgaat
ccttcaaactaccagcagattgatatgagaggaatgtatcagtcagtggctgctggtatg
cagccaccaccattacaacgtgcaccacccccaatgagaagcaaaaacccaggaccttct
tcccaagggaaatcaatgtga
DBGET
integrated database retrieval system
