Ochotona curzoniae (black-lipped pika): 121169072
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Entry
121169072 CDS
T11174
Name
(RefSeq) nuclear RNA export factor 2-like
KO
K14284
nuclear RNA export factor
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03008
Ribosome biogenesis in eukaryotes
ocz03013
Nucleocytoplasmic transport
ocz03015
mRNA surveillance pathway
ocz05014
Amyotrophic lateral sclerosis
ocz05164
Influenza A
ocz05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121169072
03015 mRNA surveillance pathway
121169072
03008 Ribosome biogenesis in eukaryotes
121169072
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
121169072
05168 Herpes simplex virus 1 infection
121169072
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121169072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121169072
03009 Ribosome biogenesis [BR:
ocz03009
]
121169072
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121169072
mRNA cycle factors
Stress granule specific factors
121169072
Ribosome biogenesis [BR:
ocz03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121169072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
Tap-RNA_bind
NXF_NTF2
TAP_C
LRR_8
UBA_8
LRR_4
UBA_4
SnoaL_4
Motif
Other DBs
NCBI-GeneID:
121169072
NCBI-ProteinID:
XP_040855474
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MRGKTQDGSASCWFKVTIPHARKCNKTKLMKSIQSYCTLPFVAVDFHYIRNQACFFIQDE
IAASALRDVSGKIRDDDNRKIAVFIHRSAAPYSVQNQLKPEEMQLLKRTLYKRYDANTKR
LDLQSLRLDPDLMHHHIDMILNQRQCMAATLQIIGTEFPELSALNLCNNKLHHLDGLSDI
LDKAPKVRSLNLCDNELWTILELEKVKELKLEELWLKGNPLRKIFPDHAAYDGKDLSPPV
AEMHGQKTTKPSEKRSREIEMIKNLILNFLHHYYFIYDYGDRHTLINVYHEKAYFSLSTV
FNSTDPVPTELCEYAKISRNIKNITEANLRRQLLKHTNHAIVDTLNTLPKTRHYFSSFSI
DTCFYTVSTCFLPLAGLKCLEDNEWNFTSAVQAFYTLQVRPGKQAGPGCHSKGGVQEKHL
KESQALLGMLAMTFSFAEYQVLFIIGFVDLGF
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaggggaaaaacacaggatggatcggcgtcatgctggtttaaggtcacaattccacat
gcacgaaagtgtaacaagacaaaactgatgaaatcaattcagagttactgcacgcttcct
ttcgttgctgtggacttccattacatcaggaaccaggcctgtttctttattcaagatgag
attgcagcatccgccctgagggatgtgagtggaaagattcgggatgatgacaacagaaag
atagctgtgttcatccatcgctctgctgcaccctactctgtgcagaatcaactgaaacca
gaagaaatgcaactgctgaagcgcactttgtacaaacggtatgatgccaacacaaagcgc
cttgacctacaaagtctacgccttgacccagacttgatgcaccatcatattgacatgata
ctgaatcaaagacaatgcatggctgcaaccctacagatcattggaacagaattccctgag
ctctcggctctgaatttgtgcaacaacaaactgcaccatctggatggcctgtctgacatt
ttagacaaggcccccaaagtcaggtccttgaacctgtgtgataacgagctttggactata
ctagaactggagaaggtaaaagagctgaagctggaagagctgtggctgaaagggaacccg
ctgcgcaagatcttccctgaccacgcagcctatgatggcaaagacttatccccaccagtt
gcagaaatgcatggacagaagacaacaaaaccaagtgagaaaaggtctcgagaaatcgaa
atgataaaaaatttgatcctcaatttccttcaccactattacttcatctatgactatgga
gatcgccatactcttattaatgtttaccacgagaaggcttatttctctctgagcactgtc
ttcaactccacagacccggtcccgaccgaattgtgtgaatatgccaagatcagcaggaat
atcaagaacatcacagaagcaaacctgaggaggcaactgctgaagcacacaaaccatgcc
atcgtggacaccctcaacacgttgcctaaaactcgacattacttcagctccttctcaata
gacacctgcttctacacagtgagcacctgcttcctccctctggcaggcttgaaatgcctt
gaggacaatgagtggaactttaccagtgcggtgcaggccttctacacgctccaggtgagg
cctgggaagcaagcgggaccagggtgtcattccaaaggaggcgttcaagaaaagcacctg
aaagaatctcaagctctgctcggcatgttagccatgactttctcttttgccgaatatcag
gtgttgttcattattgggtttgtagacctgggcttctga
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