Ochotona curzoniae (black-lipped pika): 121169196
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Entry
121169196 CDS
T11174
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121169196 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121169196 (CSTF2)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
121169196 (CSTF2)
U7-dependent histone pre-mRNA processing factors
121169196 (CSTF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121169196
NCBI-ProteinID:
XP_040855619
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MAGLAVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGETIS
PEDAPESISKAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTNIPTLITGNPQPVHAAGPGSAPGVPMNQQNPQAPQAQALGGMHVN
GAPPLMQASMQGGVPAPGQMPAAVTGPGPGPLAPGGGMQTQVGMPGGGPVPMERGQGTLQ
HSPVGPAGPASIERVQVPMQDPRAALQRGSLPANVPTPRGLLGDAPNDPRGGTLLSVTGD
VEPRGYLGPPHQGPPMHHVPGHESRGPPPHEMRGGPLAEPRPLMAEPRGPMLDQRGPPLD
GRGGRDPRGMDARSMEARAMEARGLDARAMEARAMEARAMEARAMEARAMEARAMEVRGM
EPRGMDPRGPVPGPRGPLPGGIQGPNPMNMAVGPQGGRQVPVMQGAGLQGGSLQGGSQPG
AFSPGQNQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttggctgttagagacccagcggtggatcgttctctacgttcagtatttgtg
ggaaacattccttacgaagctaccgaagaacagttaaaggacatcttttctgaggttggg
cctgttgttagtttcagattggtatatgatagggagacaggaaaaccaaagggatatggc
ttctgtgaatatcaagaccaagagacagcacttagtgccatgcggaacctgaatgggcgt
gagttcagtggaagagcacttcgagtggacaatgcggccagtgaaaagaacaaagaagag
ctgaagagccttggcactggtgccccagtcattgagtcaccttatggagagaccatcagt
cctgaggatgcccctgagtcaattagcaaagcagttgccagtcttccaccagagcaaatg
tttgaactgatgaaacaaatgaagctctgtgtccagaatagtcctcaggaagcacggaac
atgctacttcagaaccctcagctggcttatgctctgctgcaagcacaggtagtgatgaga
attgttgatccagagattgccctgaaaattctgcatcgccaaacaaatattccaacactg
attacaggcaacccccagccagtccatgctgctgggcctggctcagcacccggtgtgcca
atgaaccagcagaatcctcaggctcctcaggcccaggctttgggtggaatgcatgtcaat
ggtgcacctcctcttatgcaagcctctatgcaaggtggtgttccagcaccagggcagatg
ccggctgctgtcacaggacctggccctggtcccttagctcctggagggggaatgcagacc
caggttgggatgccaggaggtggaccggtgcccatggaacgaggacaaggaaccctacag
cactcgcccgtgggacccgccgggcctgcatcaattgagcgagttcaagtgccgatgcaa
gaccccagagcagctctgcagcgaggatctttgcctgccaatgttccaactcctcgaggt
cttttaggagatgccccgaatgacccacgaggaggcactttactttctgtcactggagac
gtagagcctagaggttacctgggaccacctcatcagggtccacccatgcaccatgtccct
ggccatgaaagccgtggaccacccccacatgagatgaggggagggcctctagctgagcct
agacctctaatggccgagccaagaggacctatgctagatcagaggggtccaccattggat
ggcagaggtggacgagatccacgaggaatggatgcacgaagtatggaggctcgagccatg
gaggcaagaggattagatgccagagcaatggaagcccgtgctatggaggctcgtgccatg
gaggctcgcgctatggaggcccgtgccatggaggcccgtgccatggaagtcagggggatg
gagcccagaggcatggatcccagaggcccagtgcctggtcctagaggacctctacctggt
ggaatccaaggtcccaatccaatgaatatggcagttggccctcagggaggtagacaggtc
ccagtcatgcagggagcagggttgcaaggaggaagtctgcagggtggaagccagcctggt
gcctttagtcctgggcagaaccaagtcactccacaggatcatgagaaggctgctttgatc
atgcaggttcttcagctgactgcagaccagattgccatgctgcctccggagcaaaggcag
agcatcctaattttgaaggaacaaatccagaaatccactggagcgccttaa
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