Ochotona curzoniae (black-lipped pika): 121169253
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Entry
121169253 CDS
T11174
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocz03021
]
121169253 (AFF2)
Transcription machinery [BR:
ocz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121169253 (AFF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
TMEM171
Motif
Other DBs
NCBI-GeneID:
121169253
NCBI-ProteinID:
XP_040855718
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MDLFDFFRDWDLEQQCHYEQDRSALKKKEWERRTQEVQQEDDLFSSGFDLFGEPYKTNKG
DALANRVQNTLGNYDEMKDLLTNHSNQNHLVGIPKNSVPQTSINKNEPSFFPEQKSRMMP
SQQDNTHSSASVPPPSVVILNSTLIQSNRKSKPEWPRDNNNPSTISASQASNQLNKMQTL
SQDQPQARLEDFFVYPAEAPQVGAIEESNAPAKEDINPVFSGEDAFKEIFQSDSVEESEF
TVQAPGSPLVASSLLAPSSGLSVQSFPPGLYCKTSMGQQKPTAYVRPMDGQEQAADISPT
LKPSIEFENNFGNLSFGSLLDGKPSAASSKTKLSKFTMLQTNEVNIPSDPSCVEEILREM
THSWPTPLTAMHTPGNAEQQAFSIPGQESQHLTPGFNLQKWSDPTSRASTKMLEDDLKLS
SDEDELEPVKTLTTQCTATELYQAVEKAKPKSNPVNPALATQPPVVAQAGGGSGSSSESE
SSSESDSDSESSTTDSESNDPPRVATPEPEPPSTNKWQLDKWLNKVTSQNKSFICGQNET
PMETISLTPPVIQPMEVQLKVKPNSNQILAEPKERPLLSLIREKARPRPTQRTPEAKALK
HKLSAPIEAASQRTMGKKQPRKVEKNTSIEEFNWPKPNISSSTPKDKESIELPDPPRGRN
KAATHKPVPRKEARPNIPLAAEKKKYRGPGKIVPKSREFIETDSSTSDSNTDQEETLQIK
VLPPCVVPGANTAKPKEACGASLTLSTLTSCSSSSSNLSINNEEPTFSPVPVTQTELLSP
LRDQENLKNLWVKIDLDLLSRVPGHNSLQIAVAKAEHKEIASKSKRHTSTIAVEKLGPKG
KRKHKPTEVSEKVPEKKQRMEEATTICLLPPCISPAPSHKPPNIREHNSSRRANRRKEEK
LFPPPLSPLPEDPPRRRNVSGNNGLFNQDKNISMTGQIISTKTKRSENKFCATFKGISVN
EGDTPKKIPSATIIVSNTAIATATVTATSIVTATVTATTTATATTTTTTTTISTITSTIT
TGLMDSSHLEMTSWAALPLLSSSSTNVRRPKLTFDDSVHNADYYMQEAKKLKHKADALFE
KFGKAVNYADAALSFTECGNAMERDPLEAKSPYTMYSETVELLRYAMRLKNFASPLASDG
DKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKQNASKVAQIPSPWVGNGKNTP
SPVSLNNVSPINTMGSCNNGPVTIPQRIHHMAASHVNITSNVLRGYEHWDMADKLTRENK
EFFGDLDTLMGPLTQHSSMTNLVRYVRQGLCWLRIDAHLL
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggatctattcgactttttcagggactgggacttggagcagcagtgtcactacgaacaa
gaccgtagtgctcttaaaaagaaggaatgggagcggaggactcaggaagtccagcaagaa
gatgatctcttttcttcaggctttgatctttttggggagccctacaagacaaacaaaggt
gatgccctcgccaaccgagtccagaacacgcttggaaactacgatgagatgaaggatttg
ctaactaaccattctaatcagaatcatctagtgggaatcccaaagaactctgtgccccag
acttccatcaacaaaaatgaaccaagctttttcccagagcaaaagagccgaatgatgcca
tctcagcaggataatacccactcctcagcatcagtgcctccaccttctgttgtgatactg
aattcaactctaatacagagcaacagaaagtcaaaaccggagtggccacgagataataat
aatcctagcaccatatcagcaagccaagcaagtaatcaactcaacaagatgcagactttg
tcacaggaccagcctcaagccagacttgaagatttctttgtctacccagctgaagcaccc
caagttggagccattgaggagtcaaacgcacctgcaaaggaagacattaatcctgtgttc
agtggagaagatgctttcaaagaaatctttcagtccgactcagtagaagaatctgaattt
acagtgcaagcacctgggtctcccttagttgcctcctctttgttagctcccagcagtggc
ctttcagttcaaagtttcccgccagggctttactgcaaaacaagcatggggcagcaaaag
ccaactgcctatgtaagacccatggatggccaagaacaggcagcagacatctcaccaaca
ctgaaaccttccattgaatttgagaacaactttgggaatctgtcatttggatcactcttg
gacggaaaacccagtgcagccagttcaaagactaaactgtcaaagttcacaatgctccaa
acaaatgaagtaaacattcccagtgatccaagctgtgttgaggaaatattacgggagatg
acccattcctggcccactcctctcactgccatgcacactcctggaaacgctgagcaacag
gcattttccatcccaggacaggaatctcaacatttgaccccgggattcaacttacaaaag
tggagtgatccaaccagcagagcatctacaaagatgcttgaggatgacctgaagctgagc
agtgatgaagatgagcttgagcctgtgaagaccttgaccactcagtgtactgctactgag
ctgtatcaggctgttgaaaaggcaaaacctaagagtaaccccgtgaaccccgccttggcc
acccagcctccagtggtagcacaagccggtggagggtctggcagctccagtgagtcagag
agcagctctgagtcagactcagacagcgaaagcagcaccacggacagcgaatccaatgac
ccacctcgtgtggctactccggagcctgaaccaccttcaaccaacaagtggcagctggat
aaatggctcaataaagtgacatcacaaaacaagtcatttatttgtggccaaaatgagaca
cccatggagaccatttccttgacgcctcctgtcatccagccaatggaagttcagctcaaa
gtgaagccaaactccaatcagattctggctgaacctaaggaacgccctctcctcagcctc
atcagggagaaagcccggccacggccgacccagagaactccagaagcaaaggctttgaag
cataagctatcggcacctatagaggcagcttctcaaaggactatggggaaaaagcagccc
aggaaagtggagaagaacaccagcattgaggagtttaactggcccaaaccgaacatttcc
agcagcactcccaaagacaaagaaagtatagagcttccggatccacccagaggccggaac
aaagctgcaacccacaaaccagtgcctaggaaagaagcaaggcctaatatccctttagct
gctgagaagaagaagtacagagggcctggcaagattgtgccaaagtctcgggaattcatt
gaaacagattcatctacttctgactccaacaccgatcaggaagagaccctgcagatcaaa
gtgctgcctccttgtgttgtacctggagctaacactgccaaacccaaggaagcctgtggt
gccagtctaaccctgagcaccttaaccagctgcagcagcagcagcagcaacttatccatc
aataatgaagagccaacattttcaccggttcctgtcacacaaactgagctgctgtccccg
ctacgagatcaggagaatctgaaaaacctctgggtgaagattgatttggacttgctctct
agggtacctggccacaactcactccaaatagcagtggccaaggcagaacacaaggagatt
gcctcaaaatccaagcgtcatacttctaccatagctgtggaaaaactgggccctaagggc
aagcgtaagcataagccaacagaagtttcagagaaagtccctgagaagaagcaacgcatg
gaggaggccacgactatctgcttgctccccccttgcatctcaccagccccgtcccataag
cctcccaacatcagagaacataattcatccaggagagcaaatagaagaaaggaagaaaaa
ctgttccctcctccactgtccccactgccagaggaccctccacgtcgcagaaatgtcagc
ggtaataatggccttttcaatcaagacaaaaacatctccatgactggacagatcatctct
actaaaactaagagaagtgaaaacaaattctgtgctaccttcaaaggaatatctgtaaat
gagggagacactccaaaaaagataccctctgccaccatcattgtcagcaacactgctatt
gctactgccactgtcactgctacttccattgtcactgccactgtcacagctaccaccact
gccacggccaccacaacaaccactaccactaccatttccaccatcacctctaccataact
actggcctcatggatagcagccacctggagatgacgtcctgggcagcactgccccttctg
tccagcagcagcactaatgtccggagacccaagctcacttttgatgactcggttcacaac
gctgattactacatgcaagaggcgaagaagctgaagcacaaggctgatgcactgtttgag
aaattcggcaaagctgtgaattatgctgacgctgccctctccttcaccgaatgtggcaat
gccatggaacgtgatcctctggaggccaagtccccatacaccatgtactctgagactgtg
gagctcctcaggtatgcaatgaggctgaagaactttgcaagccctttggcttcagatgga
gataaaaaactggcagtgttatgctatcgatgcttatcacttctctacttgaggatgttt
aagctgaagaaggaccatgctatgaagtactctagatccctgatggaatactttaagcaa
aatgcttcaaaagtcgctcagataccatctccgtgggtaggcaatggaaagaacactcct
tccccagtgtctctcaacaatgtctctcccatcaacaccatggggagctgtaacaacggc
cctgtcaccatcccccaacgcattcaccacatggctgccagccacgtcaacatcactagc
aatgttttacggggctacgaacactgggacatggctgacaaactgacaagagagaacaaa
gaattctttggtgacctggacacgttgatggggcctctgacccagcacagcagcatgacc
aatcttgtccgctacgttcgccaaggactatgttggctgcgcatcgatgcccatttgttg
tag
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