Ochotona curzoniae (black-lipped pika): 121169419
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Entry
121169419 CDS
T11174
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03013
Nucleocytoplasmic transport
ocz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121169419 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
121169419 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121169419 (THOC2)
03041 Spliceosome [BR:
ocz03041
]
121169419 (THOC2)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121169419 (THOC2)
Spliceosome [BR:
ocz03041
]
Complex C
Other components
EJC/TREX
121169419 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121169419 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
HetE-N
Motif
Other DBs
NCBI-GeneID:
121169419
NCBI-ProteinID:
XP_040855946
LinkDB
All DBs
Position
Unknown
AA seq
1600 aa
AA seq
DB search
MAAASVLLPAEWIKNWEKSGRSEFLHLCRLLSENKSDDSSTYRDFQQALYELSYHVVKGN
LKHEQASNVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNATSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPCSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSEKLDERDREKDKDDEKVDKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKKAPKQ
AETYEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISNWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVNKLKIQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKRADLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAVASV
QNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSATPKGNSTNGNSSS
NSSKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKEEKARETKER
TPKSDKEKEKFKKEEKAKDEKFKTAVPNVEAKSCQEREREKEPSRERDIAKEMKSKENVK
GGEKAPVSGSLKSPVPRSDLPEPEREQKRRKIDTHPSPSHSSAVKDSLIELKESSTKLYI
NHTPPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNSDREVPPDITKRR
KEENGTMGVSKRKSESPCDSPYPNEKDKEKNKSKSSGKEKSGDSFKSEKMDKISSGGKKE
SRHDKEKIEKKEKRDSSGGKEEKKQYPFHFVNAFRVVEKF
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcaagtgtgctgcttcccgcagagtggataaagaactgggagaaatcagga
agaagcgaatttttgcatttgtgccggctccttagtgaaaataaaagtgatgatagttcg
acttacagagatttccagcaagctctctatgagttgtcatatcatgtcgttaaaggaaat
ctaaagcatgaacaggcatctaatgttcttaatgatattagtgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatcttagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacagttggtattagcatgtttgtatttagtttcagac
acagttctaaaagaacgcctggacccagagacactggaatcattagggcttattaaacaa
tcacagcaattcaatcaaaaatcagttaaaatcaagacaaagctcttttataaacagcaa
aaattcaatttgctaagagaggagaatgaaggttatgccaagctgattgctgagttgggg
caagatttatctggaaatgctactagtgatttaatcttagaaaatatcaaatcgttaata
ggatgctttaacctggatcccaacagagttttggatgttattttagaagtatttgaatgc
agaccagaacacgatgacttctttatatctttattggaatcttatatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttggattcaaattcaagttttaccaggaaccaaatggt
gagactccgtgctctttatacagagtggcagcagtacttctgcagtttaatcttattgac
ttagatgatctctatgtacatcttcttccagctgataattgtattatggatgaacataaa
cgggagattgtggaagctaagcagattgttagaaaacttacaatggttgtattgtcttct
gaaaaattggatgaacgagatagagaaaaggacaaagacgacgagaaagtagataagcca
cctgacaaccaaaagcttggcttattggaagccttgttaaagattggtgattggcaacat
gcccagaacattatggatcagatgcctccctactatgcagcttcgcataagctaatagcc
cttgctatttgcaagctcattcacataacaatcgagcctctctaccgaagagttggtgtt
cctaaaggtgctaaaggctcacctgttaatgctttacaaaacaagaaagcacccaagcaa
gcggagacgtacgaggatttgaggagagacgtgttcaatatgttctgttatcttggtcct
cacctttctcatgatcccattttatttgccaaagttgtgcgcataggcaagtcgttcatg
aaggagtttcagtctgatggaagcaagcaagaagataaagaaaaaacggaagttatcctt
agctgtttgcttagcattactgaccaagtactacttccgtctctttctttgatggactgc
aatgcatgtatgtctgaagaactatggggaatgtttaaaacatttccttatcagcatagg
tatcgtctgtatggccagtggaagaatgaaacttataatagtcacccgctcttagtaaaa
gttaaagctcaaacaattgacagagccaaatatatcatgaagcggctaaccaaggaaaat
gtgaagccttctggaagacagattggaaagttgagccacagcaatccaacgattttgttt
gattatatcttgtcacaaatacagaagtatgataatttaataacacctgtagtagattca
ttgaaatacctcacttcattgaattatgacgtcttggcctattgtatcattgaagcttta
gccaacccagaaaaggagcgaatgaaacatgatgacacaaccatctcaaactggctgcag
agcctggctagtttttgtggcgcagtctttcgtaaatatccaattgatcttgctggcctt
cttcaatacgtggccaatcagctaaaggcaggcaaaagttttgacctgcttatattaaaa
gaagtggtacaaaaaatggccggaattgaaattacagaggaaatgacaatggagcaacta
gaggccatgactggtggagagcaactaaaagctgagggtggttattttggccagatcaga
aacactaaaaaatcttcgcaaaggttaaaggatgcactattggaccatgatcttgctctt
cctctatgtttgcttatggcccaacagaggaatggtgtaatctttcaagaaggtggagag
aaacatttgaaacttgttggaaagctctatgaccagtgccatgacactctggtacaattt
ggtgggtttttagcatctaacctaagcacagaagattatataaaacgagtgccttcaatt
gatgtgctgtgtaatgaatttcacacaccccacgatgcagcatttttcctgtctaggcca
atgtatgcacaccatatttcgtcgaagtatgatgaactgaaaaaatcagaaaagggaagt
aaacagcaacataaagtgcataagtacataacatcgtgtgagatggtgatggctcctgtc
cacgaagcagtggtctccttacatgtttccaaagtctgggatgatatcagccctcaattc
tatgctacgttctggtcgttgacgatgtatgaccttgcagttccacacaccagctatgaa
cgagaagttaataaacttaaaatccagatgaaagcaattgatgacaatcaggagatgcct
ccaaataaaaagaaaaaggagaaggaacgctgcactgcccttcaagacaagcttcttgaa
gaagagaaaaaacagatggaacatgtacagagagttctacagagactgaaactggaaaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgacataatttatacagttgcaagctgtactgaaaatgaagctagtcgatatggg
agatttctttgctgcatgttagaaaccgtgaccaggtggcacagtgatagagccacatat
gaaaaggaatgtggaaactacccaggattccttaccatattacgggcaactggattcgat
ggtggaaataaagctgaccaattagactatgaaaattttcgacatgttgtacacaaatgg
cattacaagctaaccaaggcatctgtacattgccttgaaacaggcgaatatactcacatc
aggaatatcttaattgtactcacgaaaatacttccttggtacccaaaagttttgaatctg
ggtcaagcgttggagagaagagtgcataaaatctgccaagaagagaaagagaagagggct
gatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatg
ataccagaaaatgagtttcatcacaaagatccccctccgaggaatgctgtcgccagtgta
caaaacgggcctggtggtgggccttcttcatcgtcgataggaagtgcatctaagtcggat
gaaagcagtaccgaggagactgataaatcaagggagagatctcaatgcggtgtgaaagct
gttaataaagcatctagtgccaccccaaaagggaattcaaccaacgggaacagtagctct
aacagcagcaaagctgttaaagaaaatgacaaagaaaaaggcaaagaaaaagaaaaagag
aaaaaagaaaaaactccagctacgactccagaggccagagtacttggtaaagatgggaaa
gaaaaaccaaaggaagagcggccaaataaggaagagaaagcaagagagaccaaggagaga
acacctaaatctgacaaagaaaaagaaaaattcaagaaggaagaaaaagctaaagatgag
aagtttaagaccgctgtccccaatgtagaagcaaagtcgtgtcaagagcgagaaagagag
aaggagccgtccagagagagagatatagcaaaggaaatgaagtcaaaggaaaacgttaaa
ggaggagaaaaagcaccagtgtctgggtcactgaagtcacctgttcccagatcagatctt
ccagagcctgaaagggaacaaaaacgccgcaaaattgatactcatccttctccatcacat
tcctcggcagtaaaggacagtctcatcgaactcaaggagtcttcaacaaagctctacatt
aatcatactcctccaccactatccaagagtaaggagagagaaatggacaagaaagatttg
gacaagtcaagggaaagatccagagaaagagagaaaaaagatgagaaggacaggaaagaa
cggaaaagggatcactcaaacagtgaccgcgaagtgccaccggacataaccaagaggcgt
aaagaggaaaatggaacaatgggggtatcaaaacgcaaaagtgaaagtccatgcgactct
ccttacccaaatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaa
agtggtgattcgtttaaatctgagaagatggacaaaatctcttctggtggcaaaaaggaa
tccagacatgataaagaaaagatagaaaagaaagagaaaagggacagttcagggggaaag
gaagagaagaaacaatatccttttcattttgttaatgctttcagggtagtggaaaagttt
tga
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integrated database retrieval system
