Ochotona curzoniae (black-lipped pika): 121169742
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Entry
121169742 CDS
T11174
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1 isoform X1
KO
K24318
scavenger receptor class F member 1
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121169742 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocz04131
]
121169742 (SCARF1)
Membrane trafficking [BR:
ocz04131
]
Endocytosis
Phagocytosis
Scavenger receptors
121169742 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_PEAR1L
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
121169742
NCBI-ProteinID:
XP_040856338
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MGLRLLLLLLVFQLWGSQGSPLDPSGQHVCVGSSPSELQCCPGWRQKDHECTIPICEGLD
ACKEGEVCVKPGLCRCKPGFFGAQCSSRCPKQYWGPDCRESCPCHMHGQCEPVTGKCQCQ
PDHWGTHCEFRCTCSSHGHCDPATGACRCDPGWWSSTCGRPCQCNPAAARCEQANGLCLC
EPGWWGRRCSFRCSCHGSPCVQDTGRCTCRPGWWGPECRQRCECLRGHCSATSGQCTCPP
GFRGTRCELLCPAGSYGLQCRNSCGHCKQKEPCSPDTGDCESCEPGWNGTRCHQPCPPGT
FGEGCRQQCPHCRLGEACQPDSGHCQHCDPGWAGPRCDKPCPTGTFGEGCSSACPPCVQG
TCDAVTGDCVCNAGYWGLSCNESCPSGFHGHNCSLPCECPEGPCHPVSGACQPGSHSQEA
ALLAGILVPLLLLLLGLACCACCCWAARLDPKDRPVGDGALLSRMKLQAWGALASLGALL
PCGSLSSHKLPWVTVSHHDPEIPFNHSFIEPPSTGWVSDDSFSSDPESAGEEEEGPAYCV
PPQEAVVPGTQLDSSELAGSTFPPPEDASTPFPIPRTSSLARAKRPSVSFAEGTKFTSQS
RQSSGELPSPLRKPKRLSRGAQPGLEGQEAEESPVSGPAEAGEAPSTAASARDPATSRRR
PPLGGRTVAERVEAIEGNIQENSGSVTTIYMLAGTPRGPESPVRSVLRRFGSFQKGQAEP
KVKSAIPKPPRRALSRNKGSPAPGPSTEHTGATESAGIRPEEAVRGLGDGIESSGRAQEA
PGAGPPEQDPLKQAAEVEQGESPYENVVPMAVPLGL
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggggctcaggctgctgctcctattgctagtgttccagctgtggggatcccagggctcc
ccgctggaccccagtgggcagcatgtctgtgtgggcagcagcccctccgagctccagtgt
tgcccaggctggaggcagaaggaccatgaatgcaccatccctatctgtgagggcctggac
gcctgcaaggaaggcgaagtgtgtgtgaagccaggcctgtgtcgctgcaaacccggattc
tttggggcccagtgcagctcccgctgccccaagcagtactggggccccgactgccgtgag
agctgcccctgccatatgcatggccaatgtgagccagtcaccggcaagtgccagtgccaa
cccgaccactgggggacccactgtgagtttcggtgtacctgcagctcccacgggcattgc
gaccccgccacaggcgcgtgccgctgcgaccctggctggtggtcctccacgtgtggccga
ccatgccagtgcaacccggcagcagcgcgctgtgagcaggctaatggcctctgtctgtgt
gagccgggctggtggggtcgccgctgcagcttccgctgctcctgtcacggctcgccctgc
gtgcaggacaccggccgctgcacctgccggccgggctggtggggtcccgagtgccggcag
cgatgcgagtgcctgcgcggccactgcagcgccacctcgggccagtgcacctgcccaccc
ggcttccgaggcacgcgctgtgagctgctctgtcccgccggcagctatggcctgcagtgt
cgtaacagctgcggccactgcaagcagaaggagccctgctctccagacacgggagactgt
gagtcgtgcgaacctggctggaacgggactcggtgccaccagccctgcccacctggcacc
tttggcgagggctgtaggcagcagtgtccccactgccggcttggggaggcctgtcagcca
gacagtggccactgccaacactgtgaccctggctgggcggggcccaggtgtgacaagccc
tgcccaactggcacctttggggagggctgcagttctgcctgtcctccctgtgtccaggga
acctgtgatgctgtaacaggggactgtgtctgcaatgctggctactggggtctcagctgc
aacgagtcctgcccatcgggcttccacggacacaactgttctcttccctgtgaatgccca
gaaggaccctgccaccctgtgtctggggcctgccagccaggctcgcacagtcaggaggca
gccctgctggcgggcatcctcgtgcccctgctgctgctgctcctgggccttgcctgctgc
gcctgctgctgctgggctgcccggctggaccccaaggacaggccagtgggtgacggagcg
ctgttgtccaggatgaagctgcaggcctggggggccctggccagcctgggagccctgctg
ccttgtggctccctcagcagtcacaagctgccctgggtgactgtctcgcaccacgacccg
gagatccccttcaaccacagcttcatcgagccgccctctactggctgggtctccgatgac
tccttttcttctgatcctgagtccgctggggaagaggaagagggtcctgcctactgcgtg
cctccacaagaagcagtggtcccagggacccaactggactcatcagagctggccggcagc
accttccctccccctgaggatgcctccacgccatttcccattccgcgcacctccagcctg
gcacgagccaagcggccatcggtctcctttgctgagggcaccaagtttacatctcagagt
cgccaaagctcaggggagctccccagcccacttcgaaagcccaagaggctgtcccggggt
gcccagcctggtcttgaaggtcaggaggcagaggagtccccagtttcagggccagcagaa
gcaggcgaggccccttccactgccgccagtgctagagacccggccaccagccgccgtcgc
cccccacttggtggccggacagtggctgaacgtgtggaagctattgagggcaacatccag
gagaactcgggctccgtgaccaccatctacatgctggcagggacaccccgcggaccagaa
agccctgtccggtctgtcctccgccgttttggtagtttccagaaaggccaggcagagccc
aaggtgaagagtgccatccctaagcctccacgtcgggccctgagtcgaaacaagggcagc
cctgcaccaggccccagtactgagcacactggggccacagagtctgcaggcatcaggcca
gaggaagcggttagagggctgggtgatggcattgagagttcagggagggcccaagaggcc
cctggggctgggcccccagagcaggatcccctgaagcaggctgcagaggttgagcagggg
gagtctccatatgagaatgttgtacccatggctgtgccgctggggctctga
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