Ochotona curzoniae (black-lipped pika): 121169878
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Entry
121169878 CDS
T11174
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121169878 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocz04121
]
121169878 (RNF43)
Enzymes [BR:
ocz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121169878 (RNF43)
Ubiquitin system [BR:
ocz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121169878 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
121169878
NCBI-ProteinID:
XP_040856607
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MSGGQQLQLVALWPWLLMATLQAGFGRTGLVLAAAVESERSAEQKAIIRVIPLKMDPTGK
LNLTLEGVFAGVAEITPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPRRAPRPCL
SLASKARMAGERGASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGRDAEKLMEFVYKNR
KAHVRIELKEPPAWPDYDVWILLTVVGTIFVVILASVLRIRCRPRHSRPDPLQQRTAWAI
SQLATRRYRASCRKARAEWPDSGSSCSSAPVCAVCLEEFSEGQELRVISCLHEFHRTCVD
PWLHQHRTCPLCMFNIVEGDSFSQSLGASRSYQEPGRRLHLIRQHPGHAHYHLPAAYLLG
PSRSPGARPPRPRSFLPSQEPGMGPRAQRLHRTTHPRAPGEQQCPAAVQRPYAQGWGPSR
LRCPTQHPAACPGPLRRTRPHDSSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVV
NCTDISLQGIHGSSSTFRSSLSSDFDPLVYCSPEGDAQREEPQPSATSRRRSLDSVAPIG
EIQVSSHVHYHRHRHHHYKKRFQWHSRKLGPDTGLPQSRPAASRTQVQPEPPSLEPHVTK
SDPAAPSGQLPNSQRSRAPMELAPGHAEASNPSPSLSSLCNLQKSSLPSRHPQRKRRGGP
AEPLLAPRPQDPTAHPACQAIPHFSTSLAYPWPPEAHPLVLRPPGLDRRLIPETPGPCYS
SSQPVWLCLTPRRPLGPHPPGEGPSGWSSDPPGSRPCPYSHCQVLPAQTGTEEELEELCE
QAV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggccagcagctgcagctggttgccctctggccctggctgctgatggctacc
ctgcaggcaggctttggacgtacaggactggtattggcagcagcggtggagtccgagaga
tctgcagagcagaaagctattatcagagtgatccccttgaaaatggaccccacgggaaag
ctgaatctcactttggaaggtgtgtttgctggtgttgccgaaataactccagccgaagga
aaactgatgcagtcgcaccccctgtacctatgcaatgccagtgacgacgacaatctggag
cctggattcatcagcattgtcaagctggagagcccccggcgggcgccccggccctgcctg
tcactggccagtaaggcccggatggcaggtgagcgaggagccagtgccgtgctctttgac
atcactgaagaccgagctgctgctgagcagctgcagcagcccctggggctgacctggcct
gtggtgctgatctggggtcgtgatgccgagaagctgatggagttcgtgtacaagaaccgc
aaggcccatgtgaggattgagctgaaggagcccccagcctggccagattatgatgtgtgg
atcctcctgacggtggtgggcaccatcttcgtggtcatcctggcctcagtgttgcgcatt
cggtgccgcccccgccacagcaggccggatcctcttcaacaacgaacggcctgggccatc
agccaactggccacccggaggtaccgggccagctgcaggaaggcccgggccgagtggcca
gactcaggcagcagctgcagttccgcccccgtgtgtgctgtctgcctggaggagttctct
gagggccaggagctacgggtcatctcctgcctgcatgaattccaccggacgtgtgtggac
ccctggctccatcagcaccggacctgtcccctctgcatgttcaacatcgtagagggagat
tcattttcccagtccttgggagcctctcgatcctaccaggaaccaggccggaggctccac
ctcatccgccagcatcccggccatgcccattaccacctccctgctgcttacctgctgggc
ccttcccgaagtccaggggctcggcccccgcgacctcgttccttccttccatcccaggaa
cctggcatgggccctcgagcccagcgcctccacagaaccacacacccccgggctccaggc
gagcagcagtgtcctgcagcagtccagcgcccctatgcacagggctggggaccaagccgc
ctccgatgtcccacacagcaccctgctgcttgcccagggcccctgcgcaggaccagacct
catgacagcagcggctccggagaaagctactgtaccgaacgtagtggctacctggcagat
ggaccagccagcgactccagctcagggccctgtcacggctcttccagtgactcagtggtc
aactgcacggacatcagcctgcagggcatccatggcagcagttctaccttccgcagctcc
ctaagcagtgactttgatcccttggtatactgtagccccgagggggatgcccagcgggag
gagccgcagcccagcgcaacctcccggcgccgttccttggactcggtggcacccataggg
gaaatccaagtttctagccatgtccactatcaccgccaccggcaccaccactacaagaag
cggttccagtggcatagcaggaagcttggcccagacactgggctgccccagtccaggcct
gctgcctctcggacccaggtgcagccagagccaccatcgcttgaaccacacgtcaccaag
tccgacccagctgccccttcagggcagctccccaactcacaacggtccagggctccaatg
gagctggcccccggccatgcagaagcctccaaccccagccccagcctcagcagtctttgc
aacctgcagaaatccagccttcccagccggcacccacagaggaaacgacggggtggccct
gcagagccgcttctggctcctcggccccaggacccaactgcacaccccgcctgccaggct
atcccccatttcagtaccagcctggcttacccttggcctccagaggcccacccgttggtc
ttaagacctccaggcctggacaggaggctaataccagaaaccccaggtccctgttactca
agttcacagccagtgtggttgtgcctgactccacgtcggcccctaggaccacacccacct
ggggaggggccttctggatggagttctgatccccctgggagcaggccatgcccttactca
cactgccaggtgctgccagcccagactggcacagaagaggagctggaggagctgtgtgaa
caggctgtgtga
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integrated database retrieval system
