Ochotona curzoniae (black-lipped pika): 121170214
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Entry
121170214 CDS
T11174
Symbol
SMG8
Name
(RefSeq) protein SMG8
KO
K18734
protein SMG8
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121170214 (SMG8)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
121170214 (SMG8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
121170214
NCBI-ProteinID:
XP_040857163
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MAGPVSLRELLMGASAWSGAESPGESAPEGGASGAGGPDPPWREDEICVVGIFGKTALRL
NSEKFSLVNTVCDRQVFPLFRHQDPGDPGPGIRTEPGSAGEAGGAGDAGAASGDPIRGGA
SAAEASRPDAGAQDYSLLQAYYNQESKVLYLLLTSICDNSQLLRACRALQSGEAGGGLSL
PHAETHEFWKHQEKLQCLSLLYLFSVCHILLLVHPTCSFDITYDRVFRALDGLRQKVLPL
LKTAIKDCPVGKDWKLNCRPCPPRLLFLFQLNGALKVEPPRNQDPAHPDKPKKHSPKRRL
QHALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYIVPGSQEEDPIGMLLDQLRSHCT
VKDPESLLVPATLSGPRRYQVMRQHNRQPLSFHTDSSSSSSSSGQLVDFTLREFLWQHVE
LVLSKKGFDDSVGRNPQPSHFELPTYQKWVSAAAKLYEVAIDGKEEDVSSPTGELTSKIL
SSIKVLEGFLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQHA
RGPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHSLPKSGEKPEADRNPPVL
YHNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPVFEPSTPD
PAPAKNESSPAPPDSDADKLKEKEPQTQGESTSLSLALSLGQSTDSLGTYPADPQAGGDN
PEVHGQGEVKTEKRPNLVDRQASTVEYLPGMLHSNCPKGLLPKFSSWSLVKLGPAKSYNF
HTGLDQQGFIPGTNYLMPWDIVIRTRAEEEGDLDTNSWPAPNKAIPGKRSAVVMGRGRRR
DDIARAFVGFEYEDSRGRRFMCSGPDKVMKVMGSGPKESALKALNSDMPLYILSSSQGRG
LKPHYAQLMRLFVVVPDAPLQIILMPQVQPGPPPCPVFYPEKQEITLPPDGLWVLRFPYA
YVTERGPCFPPKENVQLMSYKVLRGVLKAVTQ
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacctgtcagcttacgagagctccttatgggagcctcggcttggagcggcgca
gaaagtcccggagagtccgcgccagagggcggagcgagcggtgctggcggacccgatcct
ccgtggcgagaggatgagatctgcgtggtgggaatctttggaaagacggctctgcgcctg
aactcggagaagttctctttagtgaacaccgtgtgcgaccgacaggtctttcctctgttt
cgccaccaggatcccggggaccctggccctgggatccggaccgagcctggcagcgctggg
gaggctggcggagccggggatgctggggctgcctccggggaccccattcggggaggcgcg
tctgccgcggaggctagccgacctgatgcgggtgcgcaggattacagcctgctgcaggcc
tattacaaccaggagagcaaagtcctttatcttcttctcacttccatctgtgacaactcg
cagctgctgcgggcttgccgggctctgcagagcggggaagccggaggtggcctctcttta
cctcacgcggagacgcacgagttctggaagcaccaggagaagttgcagtgcctcagtctc
ctttaccttttctccgtctgtcacatcctgctcctggtccaccccacctgctcgttcgat
atcacctatgatcgcgtgttcagggccctggatggactaagacagaaagtcctgcccctc
ctcaaaacagccattaaagattgtcctgtgggcaaagactggaagctgaactgccgaccc
tgcccacccagactccttttcctcttccaactcaatggcgccctcaaggtcgaaccccct
cggaaccaagatccagctcacccagataaacccaaaaagcattctcccaaaaggagactg
cagcatgccctggaggaccaaatctacagaatcttccggaagagtcgtgtcttgactaac
cagagtatcaactgtctcttcaccgtgcctgccaaccaagcttttgtgtacatagtccct
ggcagccaggaggaagatcccataggcatgttgctggaccaactgaggagtcattgtact
gttaaggacccagagtctctgctggtacccgccactctctctgggcccaggcgatatcag
gtgatgcgacagcacaatcgccagcccctgtccttccacaccgacagcagcagcagttcc
agttcttcgggccaactggtggacttcacgctccgggagttcctgtggcagcacgtggag
ctagtcttgagcaagaaaggttttgatgacagcgtgggcaggaatcctcagccttctcat
tttgaactccccacgtatcagaagtgggtctctgcagctgccaagctgtatgaagtggct
atagacgggaaagaggaggacgtgagttcacccactggggagttaacatcgaagatttta
agcagtattaaagtcttggaagggtttttggatattgacacgaaattctcggaaaaccgc
tgccaaaaagctttacccatggctcacagcgcttaccagtcgaatctgcctcataactac
acaatgactgttcataagaatcagctggcacaggcgctgcgcgtgtacagccagcatgcc
agaggtccagcctttcacaaatacgccatgcaattacacgaggactgctacaaattttgg
agcaatggccatcagctctgtgaggagaggagtttaacggatcagcactgcgttcataaa
tttcactcattgcctaaatcaggagaaaagccagaggctgatcgaaaccctcctgtatta
tatcacaatagccgggctcgatccacaggtgcctgtaactgtggcaggaagcaggcgcct
cgagatgatccctttgatataaaggcagctaattatgacttctatcagcttctggaagaa
aaatgttgtggaaaattggatcatatcaatttcccagtatttgaaccaagtactccagat
cccgctcctgccaaaaatgaatcctctcctgcccctccagattcagatgctgataaacta
aaggaaaaagaacctcaaacccagggagagagcacaagcttaagtttagctttgagtctg
ggccagtctacagacagcttgggtacctatccagctgacccacaagcaggaggcgacaat
ccagaagttcatggtcaaggagaagtcaaaacagagaaaagaccaaacctggttgatcga
caggcatccacagttgaatacctcccaggcatgttacattcaaattgccctaaaggtctc
ctacccaaattctccagctggtctttggtcaaacttggccctgccaaatcttacaacttt
catacaggtttggaccaacagggcttcattccaggaacaaactatctgatgccttgggac
attgtcatcaggactagagctgaggaagaaggagacttagatacaaattcatggcccgct
ccaaataaagctatccctggaaagagaagtgcagttgtaatgggaagaggaagacggcgc
gatgacatagccagggcctttgtgggctttgagtatgaagattcccgaggtcggagattc
atgtgctcaggacctgacaaggtcatgaaagtgatgggaagtgggccaaaggagtcagcc
ttaaaagctctcaacagcgatatgcccttgtatattctgtcatcgtcccagggccgaggg
cttaaaccacattatgctcagctcatgaggctttttgtagtggttcctgatgctcctttg
cagataatactcatgcctcaggtccagccaggcccaccaccatgtccagtattttatcca
gaaaagcaggaaatcactctaccacctgatgggctttgggttctgaggtttccttatgca
tatgtgactgagaggggaccttgcttccctcccaaggaaaatgtacagttaatgagctac
aaggtgctccgtggggttcttaaagcagtaacacagtaa
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