Ochotona curzoniae (black-lipped pika): 121170767
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Entry
121170767 CDS
T11174
Symbol
SMO
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04340
Hedgehog signaling pathway
ocz04360
Axon guidance
ocz05200
Pathways in cancer
ocz05205
Proteoglycans in cancer
ocz05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
121170767 (SMO)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
121170767 (SMO)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
121170767 (SMO)
05205 Proteoglycans in cancer
121170767 (SMO)
09162 Cancer: specific types
05217 Basal cell carcinoma
121170767 (SMO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocz04030
]
121170767 (SMO)
G protein-coupled receptors [BR:
ocz04030
]
Frizzled / Smoothened family
121170767 (SMO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Fz
7tm_2
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
121170767
NCBI-ProteinID:
XP_040857975
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MAAGRSARGPELLLLAELLLLLGGPARGAASSGNATGPGPRGAGGAARRSEAATGPPPLL
SRCGRAAHCEPLRYNVCLGSALPYGATSTLLAGDSDSQEEAHGKLVLWSGLRNAPRCWAV
IQPLLCAVYMPKCENERVELPSRTLCQATRGPCAIVERERGWPDFLRCTPDHFPEGCPNE
VQNIKFNSSGQCEAPLVRTDNPKSWYEDVEGCGIQCENPLYTEAEHQDMHAYIAAFGAVT
GLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRADGTM
RIGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFRALGTTYQPLSGKTSYFH
LLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIR
GVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWE
RSFRDYVLCQANVTIGLPTKKPIPDCEIKNRPSLLVEKINLFAMFGTGISMSTWVWTKAT
LLIWRRAWCRLTGQSDDEPKRIKKSKMIAKAFSKRRELLQNPGQELSFSMHTVSHDGPVA
GLAFDLNEPSADVSSAWAQHVTKMVARRGAILPQDVSVTPVATPVPPEEHANRWLVEAEI
SPELEKRLGRKKKRRKRKKEVCPLGPPVEPRHPTPGPAQGPAPSSVPRLPQLPHHKCLVA
AGAWGAGESSRQGAWTLVSNPFCPEPSAPAAPTTWTQGRRQGLGPIHSRTNLMEAELLDA
DSDF
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggccgctggccgctctgcgcgggggccggagctgctgctcttggcggagctgctgctg
ctgctggggggcccggcccggggagcggcctcgagcgggaacgccacggggcctgggccg
cgcggcgccggcggggcggcgaggaggagcgaggcggccacgggccctccgcctctgctg
agccgctgcggccgggccgcgcactgcgagccgctgcgctacaacgtgtgcctgggctcg
gcgctgccctacggcgccacctccacgctgctggccggggactccgactcccaggaggaa
gcgcacggcaaactcgtgctgtggtcgggcctccggaatgccccccgctgctgggcagtg
atccagccgctgctgtgtgctgtgtacatgcccaagtgtgagaatgaacgagtggagttg
cccagccgcaccctgtgccaggccacccgcggcccctgtgccattgtggagcgggagcgg
ggttggcccgacttcctgcgctgcacgcctgaccacttccctgaaggctgcccgaatgag
gtgcagaacataaagttcaacagttcaggccagtgtgaggcgcccttggtgcgcactgac
aaccccaagagctggtacgaggatgtggaaggctgcgggatccagtgtgagaacccgctc
tacaccgaggccgagcaccaggacatgcatgcctacattgccgccttcggcgccgtcacg
ggcctctgcacgctcttcacgctggccacctttgtggctgactggcggaactccaatcgc
tacccagccgtcattctcttctatgtcaacgcgtgtttcttcgtgggcagcattggctgg
ctggcccagttcatggatggggcccgtcgggaaatcgtttgccgggcagatggcaccatg
aggattggggaacccacctccaatgagaccctgtcgtgcgtcatcatctttgtcatcgtg
tactatgccctgatggctggcgtggtttggtttgtggtcctcacatacgcctggcacacc
tccttcagagcgctgggcaccacctaccagcctctctcgggcaagacctcctacttccac
ctgctcacgtggtcactccctttcgtcctcaccgtggccatcctcgccgtggcccaggtg
gatggggactcggtgagcggcatctgttttgtgggctacaagaactaccgataccgggcc
ggcttcgtgctggcccccataggcctggtgcttattgtgggaggttacttcctcatcaga
ggggtcatgaccttgttctccatcaagagcaatcaccccgggctgctgagtgaaaaggct
gcgagcaagatcaacgagaccatgctgcgcctgggcatttttggcttcctggcttttggc
tttgtgctcattacctttagctgccacttctacgacttcttcaaccaggccgagtgggag
cgcagcttccgggactacgtgctgtgccaggccaacgtgaccatcgggctgcccaccaag
aagcccatccctgactgtgagatcaaaaatcgtcctagcctcctggtggaaaagatcaac
ctgtttgccatgtttgggactggcatctccatgagcacatgggtctggaccaaggccaca
ctgctcatctggaggcgcgcctggtgcaggctgacagggcagagtgatgacgagcccaag
aggatcaagaaaagcaagatgattgccaaggccttctccaagcgccgcgagctgctgcag
aacccgggccaggagctctccttcagcatgcacaccgtctcccacgacgggcccgtggct
ggcttggccttcgacctcaacgagccctcagcggacgtctcctccgcctgggcccagcac
gtcaccaagatggtggctcggagaggagccatcctgccccaggatgtgtctgtcacaccc
gtggccactccagtgccccccgaggaacatgccaaccgctggctggtggaggccgagatc
tcaccggaactggagaagcgtctgggccggaagaagaagcggaggaagcggaagaaggag
gtgtgcccactggggccgccagtggagcctcgccaccccacccccggtcccgcccagggc
ccggcgcccagctctgtgcctcggctgccgcagctgccccaccacaagtgtctggtggct
gccggtgcctggggcgctggcgagagctcccgacagggagcctggaccctggtctccaac
cctttctgcccagagcccagcgccccagcagcccccacgacctggactcaaggccgccgc
cagggcctggggcccattcactcgcgcaccaacctgatggaggctgagctcctggacgca
gactcggacttctga
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