Ochotona curzoniae (black-lipped pika): 121171650
Help
Entry
121171650 CDS
T11174
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocz04131
]
121171650 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocz04147
]
121171650 (COPA)
Membrane trafficking [BR:
ocz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
121171650 (COPA)
Exosome [BR:
ocz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121171650 (COPA)
Exosomal proteins of bladder cancer cells
121171650 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
121171650
NCBI-ProteinID:
XP_040859344
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHEHSYPLPLTAIVICNRKLDALCNIHENIRVK
SGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA
ESLKETFDPEKETIPEIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGAL
AADIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPE
LDIPPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQ
FGPYKQLFLQTFARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQ
LCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERK
KLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLEL
GPKPEVAQQTRKILSACEKNPTDACQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
YSPEFKGQICRVTTVTEIGKDVIGLRISPLQFR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaaattcgagaccaaaagcgcacgggtcaaagggctcagttttcaccccaaa
agaccctggattctgactagtttacacaatggggtcatccaattgtgggactatcgaatg
tgcacactcattgacaagtttgatgagcatgatggtccggtgcgaggcattgactttcat
aagcagcagcccctgtttgtctctggaggtgatgactataagatcaaggtttggaattac
aagcttcggcgctgcctttttacattgcttgggcacttagattatatccgcaccacattt
tttcatcatgaatatccttggattctgagtgcttccgacgatcagaccatccgagtgtgg
aactggcagtctagaacctgtgtctgtgtgttaacagggcataaccattatgtaatgtgt
gctcagttccatccctcggaagacctggttgtatcagccagcctggatcagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacttatcccctggtgcagtggaatcggat
gtgagaggaataactggggttgatctgttcggaaccacggatgcagtggtgaaacatgtg
ctagagggtcatgatcgtggagtgaactgggctgccttccaccccaccatgccccttatt
gtttcaggggcagatgaccgccaagtgaagatctggcgcatgaatgagtcaaaggcgtgg
gaggttgatacctgccggggccattacaacaacgtgtcctgtgctgtcttccaccctcgc
caagagctaatcctcagcaattctgaggataaaagtattcgagtctgggatatgtctaag
cggactggagttcagacgttccgcagggaccatgatcgtttctgggttctagctgctcac
cctaatcttaacctgtttgcagcaggccatgatggtggcatgattgtgtttaagctggaa
cgagagcgaccagcttacgctgttcatggcaatatgctgcattatgtcaaggaccgattc
ttacggcagttagatttcaacagttccaaagatgtggctgtgatgcagttgcgtagtggt
tccaagtttccagtattcaatatgtcctacaatccagcggaaaatgctgtcctactgtgt
acaagagccagcaatttagagaatagtacctatgacctgtacaccatccccaaggatgcg
gattcccagaatcctgatgcccctgaaggaaaacggtcctcaggcctgacagccgtttgg
gttgctcgtaatcgatttgctgtcctggatcggatgcattcgcttctgatcaagaatcta
aagaatgagatcaccaagaaagtacaggtgcccaactgtgatgagatcttctatgctggc
acaggcaatctcctgcttcgagatgcagactccatcacactctttgatgtacagcagaaa
cggactctggcatctgtgaagatttccaaggtgaaatatgtgatttggtcagcagatatg
tcccatgtagcactactggccaaacatgagcactcataccctttgcctcttacagccatt
gtgatctgtaaccgcaaactggatgctctgtgtaacatccatgagaacattcgtgtcaag
agtggggcatgggatgagagtggggtgtttatctataccacaagcaaccacatcaagtat
gctgtcaccactggggaccacgggatcatccgaactttggatttacccatctatgtcacc
agggtgaaaggcaacaatgtatattgcctagacagagaatgtcgtcctcgggtactcacc
attgatcccactgagttcaaattcaagctggctctgatcaacagaaaatatgatgaggtc
ctgcacatggtgaggaatgccaaactggtaggccagtctatcattgcctacctccagaag
aagggctatcctgaagtagccctgcatttcgtcaaggatgagaaaactcgcttcagtctg
gcattggaatgtggaaatattgagattgctctggaagcagccaaggctctggatgacaag
aactgctgggagaagctgggtgaagtcgccctgctgcaggggaaccaccagattgtggaa
atgtgctaccagcgcaccaaaaacttcgacaaactttccttcctgtaccttatcactggc
aacttggagaaacttcgcaagatgatgaagattgctgagatccggaaggacatgagtggc
cattatcagaatgccctatacctgggtgatgtgtcagaacgagtgagaatcctgaagaac
tgcgggcagaagtccctggcctatctcacagctgctacccatggcttggatgaagaagct
gagagcctgaaggagacatttgacccagagaaggagacaatcccagaaattgaccctaat
gccaagctgcttcagccacctgcacctatcatgccactggataccaactggcccttattg
actgtgtccaaggggttctttgaaggctccattgccagcaaggggaagggaggagcactg
gctgccgacattgacatcgatactgtgggcactgaaggctggggagaagatgcagagctg
cagctggatgaagatggatttgtggaggccacagaaggtttgggagatgatgctcttggc
aagggacaggaagaaggaggtggctgggatgtagaagaggacctggagctcccgcctgag
ctggatatacccccaggggcagctggtggggctgaagatggattcttcgtgcccccaaca
aagggaacaagtcctactcagatctggtgcaataactcccagcttccagttgatcacatt
ctggcaggttcttttgaaacagccatgcggctccttcacgaccaggtaggggtgatccag
tttggcccctacaagcaactgttcctgcaaacatttgcccgaggccgtactacttaccag
gctctgccctgcctaccctccatgtatggctaccctaatcgcaattggaaggatgcagga
ctgaagaatggtgtgccagcggtgggcctgaagcttaacgacctcattcaacggttgcag
ctgtgctatcagctcaccacagttggcaagtttgaggaggctgtggaaaaattccgttct
atcctcctcagtgtcccacttcttgttgtggacaataagcaggagattgcagaggcccag
cagctcattaccatttgccgtgaatacattgtgggcttgtcaatggagatagaaagaaag
aagcttcccaaagagaccctagagcagcagaagcgcatctgtgagatggcagcctatttc
acccactcaaacctgcagcctgtgcacatgattttggtcctgcgtacagctctcaacctc
ttcttcaagctcaagaactttaagacagctgccacctttgctcggcgcctgctggaactt
gggcccaagcctgaggtggctcagcagacccgaaaaatcctgtctgcctgtgaaaagaat
cccacagatgcctgccagctcaattatgacatgcacaacccttttgacatttgtgctgcc
tcttaccggcccatctaccgagggaaaccagtggagaagtgtcctctcagtggggcctgc
tattccccagagttcaagggtcagatctgcagagtcaccaccgtgacagagatcggcaaa
gatgtgattggtctgaggatcagtccgctgcagtttcgctaa
DBGET
integrated database retrieval system
