Ochotona curzoniae (black-lipped pika): 121171855
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Entry
121171855 CDS
T11174
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2
KO
K04646
clathrin heavy chain
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04142
Lysosome
ocz04144
Endocytosis
ocz04721
Synaptic vesicle cycle
ocz04961
Endocrine and other factor-regulated calcium reabsorption
ocz05016
Huntington disease
ocz05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121171855 (CLTCL1)
04142 Lysosome
121171855 (CLTCL1)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
121171855 (CLTCL1)
09156 Nervous system
04721 Synaptic vesicle cycle
121171855 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121171855 (CLTCL1)
09164 Neurodegenerative disease
05016 Huntington disease
121171855 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocz04131
]
121171855 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocz04147
]
121171855 (CLTCL1)
Membrane trafficking [BR:
ocz04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
121171855 (CLTCL1)
Exosome [BR:
ocz04147
]
Exosomal proteins
Proteins found in most exosomes
121171855 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Gp18_dom_I
TPR_Vps41
B-prop_COPA_B_2nd
TPR_PEP5_VPS11
TPR_IF140-IFT172
Motif
Other DBs
NCBI-GeneID:
121171855
NCBI-ProteinID:
XP_040859504
LinkDB
All DBs
Position
Unknown
AA seq
1709 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIRDKVGEQAQVVIIDMQDPTA
LIRRPISADSAIMNPASKVIALKAEKTLQIINIEMKSKMKAHTMTEKVVFWKWISVNTVA
LVTETAVYHWSMEGDCQPTKMFDRHASLAGCQVIHYRTDTHQKWLLLVGISAQQNRVIGA
MQLYSVDRKVSQPIEGHAAAFAEFKMEGNAKPATLFCFAVRSPAGGKLHIIEVGQPAAGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGAKHGVIYLITKSGYLHMYDLESGACIYMNRISA
DTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEENIVNYATSVLQNPDLGLRLAVRNNLAGA
EDLFMRKFSALFAQGNYTEAARVAATAPKGILRTNDTISKFRSIPTQPGQPSPLFQYFGV
LLDHGQLNKLESLEICHPVLQQGRKHLLEKWLKEDKLECSEELGDLVKTTDATLALSVYL
RASVPSKVVQCFAETGQFQKIVLYAKKVGYSPDWVFLLRSVMRVSPEQGQQFSHMLVQDM
EPLVNVNQIVDIFMENSLIQQCTSFLLDVLKNNHPAEGHLQTRLLEMNLVHAPQVADAIL
GNQMFSHYDRAHIGQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLINFFGSLSV
EDSLECLRTMLSANIRQNLQLCVQVASKYHEQLGAQALVELFESFKSYEGLFYFLGSIVN
FSQDPDVHLKYIQAACKTGQIKEVERICRESSCYNPERVKNFLKEAKLADQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRLQEGCEEPATHNALAKIYIDSNNNPECFLRENAYY
DSSVVGRYCEKRDPHLACVAYERGQCSLEFIKVCNENSLFKSEARYLVRRKDPELWGHVL
EETNPSRRQLIDQVVQTALSDTQDPEELSVTVKAFMTADLPHELIELLEKIVLDNSIFSE
HRNLQNLLILTAIKVDHTRVMDYISRLDNYDAPDIASIAISSALYEEAFAIFRKFDVNAS
AIQVLIEHIGNLDRAYEFAEKCNEPAVWSQLARAQLQKDLVKEAIDSFIRAEDPSSHLDV
VQAASRSCNWEDLVKFLQMARKKSHESYIETELIFALAKTSRLSELEECISGPNNANIQQ
VGDRCYEEGMYEAAKLLYSSISNFARLASTLVRLGEYQAAVDSSRKANSTGTWKEVCFAC
VDGQEFRLAQLCGLHIVIHADELEDLIRCYQDRGYFEELIFLLEAALGLERAHMGMFTEL
AILYSKFKPQKMPEHLELFWSRVNMPKVSHTSSQIPAAEGDPGSVSLSSPVTSPQVLRAA
EQAHLWAELVFLYDKYEEYDNAVLTVISHPTEAWKEGQFKDIIAKVANVELYYKALQFYL
DYKPLLINDLLLVLSPRMDHTRTVGFFSKVGHLPLVKPYLQSVQSHNNKSVNEALNHLLT
EEEDYQGLRASIDAYDNFDNIGLAQRLEKHQLIEFRRIAAYLYKGSNRWVQSVELCKKDH
LYKDAIQYAAESRDTELATKLLQWFLEEGKRECFAASLFTCYDLLHPDVVLELAWRHNFM
DLAMPYFIQVVREYVSKMDRLDARVSLCKQEEYMVEPAPLVLGRGGAGEEAAGCQALEGQ
PLLLTTGPGPASFSRGFATFAFFQPPTFD
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagatactccccatccgctttcaggagcacttccagctccaaaacctgggaatc
aatcctgccaacattggatttagcacactgaccatggagtctgacaagttcatctgtatc
cgagacaaagttggggagcaggcccaggtggtgataatcgacatgcaggacccaacggcg
ctgatccgacggcccatctctgcggacagtgccatcatgaacccagcctccaaggtgatt
gctctgaaagctgagaagacacttcagattatcaatattgagatgaagagtaagatgaag
gctcacaccatgacagaaaaggtggttttctggaaatggatctcggtgaacacggtcgcc
ttagtgactgagaccgcggtctaccactggagcatggaaggtgactgccagcccaccaag
atgtttgacaggcacgccagcctggcagggtgccaggtgatccactaccgcaccgacacg
catcagaagtggctgctgctcgtcggtatctcggcccagcaaaaccgtgtgattggggca
atgcagctctattctgtggacaggaaggtttctcagcccatagaaggccacgccgctgct
tttgcagagttcaagatggagggcaatgccaagcccgctaccttgttctgctttgctgtt
cgcagccctgcaggaggcaagttgcatataattgaagtgggacagccagcggcaggaaac
cagccttttgtcaagaaagccgtggacgtgttcttccctcctgaagcccagactgatttc
ccggtggctatgcagattggagccaaacatggtgttatctacctgattacaaagtctggt
tatcttcacatgtatgacttggagtctggcgcgtgcatctacatgaaccgcatcagtgcc
gacaccatctttgtcactgctcctcatgagccgacctctggaatcatcggtgtcaataaa
aagggacaggtgctgtcagtatgtgtggaggaagagaacatcgtgaattatgccaccagt
gtgctacagaatccagacctgggtctgcgtctggcagtccgcaataacctggcgggggca
gaggacctgtttatgagaaagttcagcgccctctttgctcagggaaactataccgaagcc
gcccgagttgcagcgactgcaccaaagggaattctgcggaccaatgacacgatcagcaag
ttccggagtattcccacccaacctgggcagccctctcctctgttccagtattttggcgtc
ctacttgaccatggtcagctcaacaagctggaatccttagaaatctgccatccagttctt
cagcaaggacgcaagcatctcttggagaagtggctgaaagaagataagttggagtgttca
gaagagcttggggatttggtcaaaaccactgatgccacacttgctctaagtgtgtacctt
cgggccagcgtgccaagcaaagttgtccagtgctttgcagaaacaggccagttccagaaa
attgtactctatgccaaaaaggtcggatacagcccagactgggtatttttgctgaggagt
gtgatgagggtcagcccagagcaggggcaacagttttcccatatgcttgtacaggacatg
gagccattggtcaacgtgaaccagattgtggacattttcatggagaacagtttaattcag
cagtgtacttccttcttgttggatgtcttgaagaacaatcacccggccgaggggcatctg
cagactcggctgttggagatgaacctggttcatgcaccccaggttgcagatgccatcctt
ggaaatcagatgttttcacattacgatcgggcccacatcggccagctctgtgagaaggcg
ggcctcctgcagcgggcgctggagcactacaccgacctctatgacatcaagagggctgtg
gtccacactcacctcctcaatcctgagtggcttatcaacttcttcggctccttgtctgtg
gaggattccttggagtgtctgcggactatgctgtctgcaaacatcaggcagaacctgcag
ctgtgcgtgcaggtggcctccaagtaccacgagcagctgggcgcgcaggccctagtggaa
ctttttgaatccttcaagagctatgaaggcctcttctacttcctgggctccatcgtgaac
ttcagccaagacccagacgtgcacctcaagtacatccaggccgcctgtaagacagggcag
atcaaggaggtggagaggatctgccgagagagcagctgctacaacccggagcgggtgaag
aacttcctgaaggaggccaagctggcagaccagcttcccctcatcatcgtgtgtgatcgc
tttgactttgtccatgacctggtcctctacttgtaccgcaacaacctgcagaagtacata
gagatctacgttcagaaggtcaatcctagccggatcccagctgtggttggagggctgctt
gatgtggactgttctgaggacgtaattaagaacttaatcatggtagtgagaggacagttc
tctactgatgagctggtggctgaagtagaaaagagaaacaggctcaagttgctgcttcca
tggctggagtctcggctccaggagggatgtgaggagcccgccactcacaatgctctggcc
aaaatctacatcgacagcaacaacaacccggagtgcttcctgcgagaaaatgcctactac
gacagcagtgtggtgggccgctactgcgagaagcgtgacccccacctggcctgcgtggct
tacgaacgcgggcagtgtagccttgaattcatcaaggtttgcaacgagaattctctattc
aaaagcgaggctcgctacctggtgcgtaggaaagatccagagctctggggtcatgttctg
gaagagaccaacccatcccggagacagctgattgaccaggtggtacaaacagcattgtca
gacacacaggatcccgaagagctgtcagtcaccgtcaaagcctttatgacagctgacctg
ccccacgagctgattgagctgctggagaagattgttctggacaactccatcttcagcgag
cacaggaacctccagaacctgttgattctgacggccatcaaggtggaccacacacgggtc
atggattacatcagccgcctggacaactacgatgctcctgacatcgccagcattgccatc
agcagcgcgctctacgaggaggcctttgccatcttccgcaagttcgatgtaaacgcctct
gccatccaggtcctgattgagcacattggaaacctggaccgagcctatgagtttgcagag
aagtgcaatgagcctgctgtgtggagtcagctggcccgggcccagctccagaaagacctg
gtgaaggaagccattgactcctttatcagagctgaggacccttcttcccatctggatgtt
gtccaggcagccagcaggagctgcaactgggaagatctagttaaattcctgcagatggcg
aggaaaaagagccacgagtcctacatagaaactgaactcatttttgccttagctaaaacc
agccgtctctctgagttagaggaatgtattagtggacccaacaatgccaacatccagcag
gttggagaccgctgttatgaggaggggatgtatgaggctgccaagctgttgtacagcagc
atctctaattttgcacgcctggcttctaccttggtccgccttggtgaatatcaggcagca
gtggacagcagccgcaaggccaacagcactggaacatggaaagaggtgtgcttcgcctgt
gtagatggccaggagttccgcctggcacagctgtgtggcctgcacatcgtcatccatgca
gatgagctggaggacctgattcgctgttaccaggatcgcggctactttgaggagctcatc
ttcctgctggaggcagctctgggcctggagcgggcccacatgggcatgttcacagagctg
gccatcctctactccaaattcaagccgcagaagatgccagagcacctggagctcttctgg
tcgcgtgtcaacatgccaaaggtatcccacacctcttcccagatcccagctgctgagggg
gaccctggctcagtcagcctgagctcgcctgtgacctccccacaggtgctgagggctgca
gagcaggcacacctgtgggcagagctggtgttcctatatgacaagtacgaagagtatgac
aacgccgtcctcactgtgatcagccatcccaccgaggcctggaaagaaggtcagttcaag
gacatcattgccaaggtcgccaacgtggagctgtactacaaagccctgcagttctatctg
gattacaagcccctgctcatcaatgacctgctgctggtgctgtcaccccggatggaccac
acgcgcaccgtgggcttcttctccaaggtgggccatttgcccctggtgaagccatatctg
cagtcggtccagagccacaacaacaagagtgtgaacgaagcgctcaaccacctgctgaca
gaagaggaggactaccagggcctgcgggcgtccatagatgcctatgacaactttgacaac
atcggcctggctcagcggctggagaagcaccagctgattgagttccggcgcatcgcagcc
tatctgtataagggcagcaaccgctgggtccagagcgtcgagctctgcaagaaggaccat
ctgtacaaggatgccatccagtacgctgccgagtcacgtgacactgagctggccacgaag
ctgctacagtggttcctggaggagggcaagcgggaatgcttcgcagcctccctcttcacc
tgctatgacctgctgcaccccgatgtggtgcttgagctggcctggaggcacaacttcatg
gacttggccatgccctacttcatccaggtggtgagggagtacgtgagcaagatggacaga
ttggatgcccgggtcagtctgtgcaagcaagaagaatacatggtggagcccgccccactc
gtcttgggcaggggcggggcaggggaagaggctgctggctgccaggcattggaaggccag
ccgctgctgctgaccacaggccctggccctgccagcttctcccgtggattcgcgaccttc
gccttctttcagcctcccacatttgactag
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integrated database retrieval system
