Ochotona curzoniae (black-lipped pika): 121171915
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Entry
121171915 CDS
T11174
Symbol
DEPDC5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121171915 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocz04131
]
121171915 (DEPDC5)
Membrane trafficking [BR:
ocz04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
121171915 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Las1
Motif
Other DBs
NCBI-GeneID:
121171915
NCBI-ProteinID:
XP_040859563
LinkDB
All DBs
Position
Unknown
AA seq
1595 aa
AA seq
DB search
MRTAKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVTQVFRLRAYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYITQKVEFAGIRAQAGELWVKNEKVMCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYDAKSTDEFPEVNRA
SIRQDHKGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPQGDNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRSAPCDSRLGDDYNIPHWINHSFYTSKSQLFCNSFT
PRIKLAGKKSASEKAKNGRDTSLRTPKESENALPIQVDYDAYDAQVFRLPGPSRAQRLAT
CRAVRERESHSRKSASSCDVSSSPSLPSRALPTEEVRSQASDDSSLGKSANILMIPHPHL
HQYEVSSSLGYTSTRDVLENMIEPPQRDSSAPGRFHVGSVESMLHVRPGGYTPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMVELQGSGQRDPAHSSAELLE
LAYHEAAGRHSTSRQPGESLSFLSFSGTEELPASLLSNSGSGINPRTQNKDSLENSVSTS
ADPMPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQALQNDYTEGCYDLLPEADIDRRDEE
GVQMTAQQVFEEFICQRLMQGYQIIVQPKAQKPSPAVPPPLSSSPLYSRGLVSRSRPEEE
DQYWLSMGRTFHKVTLRDKMITVTRYLPKYPYESAQIHYTYSLCPSHSDSEFVSCWVEFS
HERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACVTATKRITEGEVHCDIY
GDRPRADEDEWQLLDGFIRFVEGLNRIRRRHRSDRMMRKGAAMKGLQMTGPITTHSLEAT
GPPVGKKGTSALSALLEMEASQKCLGEQQVAVLGGKSTAQPAESSSVAMTPTYVDSPRKD
GAFFMEFVRSPRTASSAFYPQVSLDQTAPPVLDGSGLGISMGQSVDRSNSQTFGNSQNVG
EQGFSSTNSSDNSSLQQQAASSLTSSSTLAEILEAMKHPSTGVQLLSEQKGLSPCCFISA
EVVHWLVNNVEGVQTQAMAIDIMQKMLEEQLITHASGEAWRTFIYGFYFYKIVMDKEPDR
VAMQQPAPTWHTAGVDDFASFQRKWFEVAFVAEELLHSEIPAFLLPWLPSRPASYASRHS
SFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNAAFEIKL
HWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPLNISCL
LKEGSEHLFDSFEPETYWDRMHLFQEAIAHRFGFVQDKYSASAFNFPAENKPQYIHVTGT
VFLQLPYSKRKFSGQQRRRRNSTSSTNQNMFCEERVGYNWAYNTMLTKTWRSSATGDEKF
ADRLLKDFTDFCVNRDNRLVTFWTSCLEKMHASAP
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgagaacagccaaagtgtacaagctggtcatccacaagaagggctttgggggcagcgat
gatgagctggttgtgaaccccaaggtgtttcctcacatcaaacttggagacatcgtagag
attgctcaccctaatgacgaatacagccctctgcttctgcaggttaaatcgctcaaggaa
gatttacagaaagaaactatcagtgtggaccagactgtgactcaagtgttccggctaaga
gcttatcaggatgtttatgtgaatgtagtagaccctaaggatgtgacccttgacctcgtg
gaattaacttttaaggatcagtatattggccgtggagatatgtggcgactaaagaaaagt
ttggtcagcacatgcgcctatattacccagaaggtagaatttgccggcatcagggcacag
gctggtgagctgtgggtcaagaatgagaaggtcatgtgtggttacatcagcgaagatacc
cgggtggtgttccgttctacatcagctatggtttacatatttattcagatgagctgtgaa
atgtgggattttgatatttatggggatctgtattttgagaaagctgtgaacggtttcctt
gccgatctatttaccaagtggaaggagaagaactgcagtcatgaagtgacagtggtcctg
ttttccagaactttctatgacgcaaaatctactgatgaatttcctgaagtaaaccgagcc
tccatcagacaggatcataaggggcgattttatgaagacttttacaaagtggtggtccag
aatgagagaagagaagagtggacttcactcctggtgaccattaaaaagctcttcatccag
tatccagtgttggtgcgactggaacaggcagagggctttcctcaaggagacaattctacc
tcagcacaaggaaactacctagaggccatcaacctgtcatttaatgtgtttgacaaacac
tacatcaaccgcaactttgaccgaactgggcagatgtcagtggtgatcacacccggggtg
ggcgtctttgaagtggaccgtctgctcatgatcttgaccaagcagcggatgatagataac
ggaattggtgtggacttggtgtgcatgggagagcaaccattacacgctgtgccattgttc
aagctgcataatcggagcgccccttgtgattctcgtctgggtgatgactataatattcct
cactggataaaccacagtttctacacctccaaaagccagcttttctgcaacagtttcacc
ccacgaataaaattggcaggaaagaagtctgcctccgagaaagcaaaaaatggccgtgat
acatctctcaggacaccaaaggaatctgagaacgcccttcctatccaagtagactacgac
gcctatgacgcacaagtgttcaggctgcccggcccgtcacgggctcagcgcctcgccacc
tgcagggccgtgcgggagcgcgagagtcacagtcgaaagagtgccagctcctgtgacgtc
tcctccagcccctccctgccaagtcgggcactgcccaccgaggaagtgaggagccaggct
tctgacgacagctccctgggcaagagcgccaacatcctgatgatcccacacccccacctg
caccaatatgaagtcagcagctcactgggctacaccagcactcgagacgttctggaaaac
atgatagagccgccgcagcgagactccagcgcccctgggaggttccacgtgggcagtgtg
gaatccatgctccatgtgcgacctggtggatacacgccgcagcgagccctgattaatcca
tttgccccctctcgaatgcccatgaaactcacctccaaccgaaggcgctggatgcacact
ttccctgtgggaccatcgggggaagccatccagatccatcaccagacccgacagaatatg
gtggagctgcaaggcagcgggcagagggacccagctcactcctccgcagagctgctagaa
ttggcatatcatgaagctgctggaaggcacagcacgtcccgccagcctggtgagagcctg
tccttcctgagcttcagtggaacagaagagcttcccgctagcctgcttagcaacagtggc
tcaggtataaatcctaggacccagaataaggattctttagagaacagtgtctctacctct
gcagacccaatgccaggcttctgttgcacagttggagtggactggaagtctctcactact
ccggcgtgcctccccctcaccaccgactacttccctgaccgccaggccctgcagaacgac
tacacagagggctgttatgatcttctcccagaggcagacattgacaggagggatgaggaa
ggtgtgcagatgacggcccagcaggtgtttgaagaattcatttgccagcgcctcatgcaa
ggctaccaaatcatagtgcagcccaaagcacagaagcccagccctgctgtcccaccccca
ctgagcagcagccccctctatagccgaggcctggtgtctcgaagccgccctgaggaggag
gatcagtactggctgagtatgggcagaactttccacaaagtgacgctgagggacaagatg
atcacggtgacacggtacctccccaagtacccttacgaatccgcccagatccactatacc
tacagcctctgcccttcacactcagattccgagtttgtctcctgttgggtggagttctcc
catgagcggctcgaggagtacaagtggaactacctggatcagtacatctgctccgctggc
tccgaggacttcagcttaattgagtctctgaagttctggaggacccgcttcctactgctg
ccagcctgcgtgactgccaccaaacggatcacagagggggaggtccactgcgacatctat
ggggacaggccccgggcagacgaggacgagtggcagctcctggatggcttcatccgcttt
gtggagggcttgaaccggatccgcaggcggcatcgctcggatcgcatgatgcggaaaggg
gccgccatgaagggcttacagatgactgggcccattactacccattccctcgaggcgacg
gggcctccggtcggaaagaagggaacctcagctctgtcagccctgctggagatggaggcc
agtcaaaagtgcctgggagaacagcaggtggccgtgcttggtgggaagagtaccgcccag
ccagctgagagcagcagcgttgccatgacgcccacctacgtggacagcccacgaaaggac
ggggccttctttatggagtttgtccgcagcccacgcacagcgtcatctgccttctaccct
caggtatctctggaccaaacagcccctccagtgttggatggcagcggtttggggataagc
atgggccagtctgtagacagaagcaacagccagacctttgggaactcccagaatgtggga
gaacagggtttctcctctacaaactccagtgacaacagcagcttgcagcagcaggcagcc
agctccttgacctcgtcctccaccctggcagagatcctggaagccatgaagcacccctcg
acaggagtccagctgctctctgagcagaagggcctctcgccgtgctgcttcatcagtgcc
gaggtggtgcactggctggtgaacaacgtggagggcgtccagacgcaggccatggccatc
gacatcatgcagaaaatgctggaagagcagctgatcacacacgcgtctggcgaagcctgg
cggaccttcatctacggcttctacttctacaagatcgtcatggacaaagagcccgaccga
gtggccatgcagcagcccgctcccacttggcatacggcaggggtggatgatttcgccagc
ttccagcgcaagtggtttgaggtggccttcgtggcagaagagctcctgcactcagagatt
cctgccttcctcctgccctggctgcccagccggccggcctcctacgcgagcagacacagc
tcctttagccgcagtttcggaggacggagccaggcagctgcgctcttagccgccaccgtc
ccggagcagaggaccgtgaccctggatgtggatgtaaacaaccgcacggaccgcctggag
tggtgcagctgctactaccatggcaacttctccctgaacgctgccttcgagatcaagctg
cactggatggccgtgaccgccgctgtgctcttcgagatggtccaaggctggcatcggaag
gccacctcctgcggcttcctcttggtcccagttttggagggtccttttgcactgcccagt
tacctgtacggcgacccccttcgagcccagctgttcatcccgctcaacatcagctgcttg
ctcaaggaaggcagcgagcacctgtttgacagctttgaacctgaaacctactgggatcgg
atgcatctgttccaagaagccattgcacacaggtttgggtttgtacaagataagtattcc
gcctctgctttcaacttccctgctgagaacaagccccagtatatccacgtcacaggaacc
gtattcctccagctgccctactccaagcgcaagttctcgggccagcagcggcgccggcgc
aactccaccagctccactaatcagaacatgttctgcgaggagcgtgttggctacaactgg
gcctacaacactatgctgaccaagacatggcgctccagcgccacaggcgacgagaagttt
gccgaccggttactgaaggacttcactgacttctgcgtcaaccgcgacaatcggctggtc
acgttctggacgagctgtctggagaagatgcacgctagcgccccgtga
DBGET
integrated database retrieval system
