Ochotona curzoniae (black-lipped pika): 121171931
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Entry
121171931 CDS
T11174
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121171931 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121171931 (THOC5)
03041 Spliceosome [BR:
ocz03041
]
121171931 (THOC5)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
121171931 (THOC5)
Spliceosome [BR:
ocz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121171931 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
121171931
NCBI-ProteinID:
XP_040859587
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MSSESSKKRKPKVIRSEGAPTEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKEAAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYQEAPPDISKAEVTM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSSQPPRQDKTLSV
AIEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSV
MLDVKCKDDSVLHLTFYYLMNLNIMTVKAKVTTATELITPISAGDLLSPDSVLSCLYPGD
HGKKTPNPANQYQFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFPKEQPQHTVVADHSLS
ASHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVSSDCQYLFPAKVVSRLVKWVMIPHE
DYMELHFTKDIVEAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKG
EKTNSNDDNIRAMESEVNVCYKELCGPRPSHQLLTNQLQRLCVLLDVYLETESHDDSVEG
PKEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatcaagtaaaaagcggaagcccaaagtcatccggagtgagggtgccccc
accgaaggaaagcggaaccgatccgacaccgagcaggaagggaaatattacagcgaggag
gcggaggtggacctgcgggaccctggcagagactacgagctgtacaagtacacatgtcag
gagctgcagaggctcatggccgagatccaggacctgaagagccggggtggcaaggaggcg
gcgattgagattgaagaacggaggatccagagctgtgtgcattttatgaccctgaagaag
cttaatcggttagcccacatcaggttaaagaaaggaagagaccaaacccatgaggctaaa
cagaaagtagacgcctatcacctacagctgcagaacctgctgtatgaggtgatgcaccta
cagaaggagatcaccaagtgtctggagtttaagtcaaagcatgaagaaattgatctggtc
agtttagaagagttctatcaggaggctccgccagatatcagcaaggctgaagtcacgatg
ggagaccctcaccagcaaactctggcgcgtctggactgggagctggagcagcggaaaagg
ctggcagagaagtaccgagagtgcctgtccaacaaggaaaagatcctcaaggagatcgag
gtgaagaaggagtacctgagcagcctgcagcctcgcctcaacagcatcatgcaggcatcc
ctcccagtgcaggaatacctgttcatgccgtttgaccaggctcacaagcagtacgagaca
gccaggcacctgccacctccgctctatgtgctctttgttcaggctactgcttatgggcag
gcctgtgctcatatgaaatcctcctcccagccccctagacaggataagacgttgtctgtg
gcgattgaaggcagtgtggatgaagccaaggctctgttcaaaccccccgaggactctcaa
gatgatgagagcgactcggacgccgaggaggagcagaccacgaaacgccggcggcccaca
ctgggggttcagttggacgacaagcgcaaggagatgctcaagcggcacccgctgtctgtc
atgctggatgtgaagtgcaaagatgacagcgtgcttcacctgaccttctactacctcatg
aatctcaacattatgacagtgaaagccaaagtgacaaccgccacggagctgatcaccccc
attagtgcaggggacttgctgtctcctgactcagtactgagctgtttgtatccaggggat
cacggaaagaaaactccgaatccagccaatcagtatcagtttgataaagttggcatcctg
actttgagagactacgtgcttgacctcggtcacccctatttgtgggtacaaaagctgggt
ggcctccacttccccaaagagcagccgcagcacaccgtcgttgctgaccactcactgagc
gccagccacatggagaccaccatgaagctgctgaagaccagggtgcagtcccgcctggcc
cttcacaaacagtttgcgtccctggaacatggcattgtaccagttagcagtgattgccag
tacctcttccctgccaaggttgtctctcgcctggtgaagtgggtgatgattccgcacgag
gattacatggagctgcatttcaccaaagacattgtggaggcaggactagcaggggacacc
aatctctactacatggcgctcatcgaaaggggcacagccaaactccaggccgctgtggta
ctgaaccctggctactcctccatccctcctgttttccagctgtgtctgaactggaagggc
gagaaaaccaacagcaatgacgacaacattcgggccatggagagtgaggtcaacgtgtgc
tacaaggagctgtgcggcccccggcccagccaccagctcttgaccaaccagctgcagcgg
ttgtgcgtgctgctggacgtctacctggagactgagagccatgatgacagtgtggagggg
cccaaggaatttccccaggagaagatgtgtctgcggcttttcaggggtcccagcaggatg
aaaccgtttaaatataaccatcctcagggattcttcagccatcgctga
DBGET
integrated database retrieval system
