Ochotona curzoniae (black-lipped pika): 121172410
Help
Entry
121172410 CDS
T11174
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04137
Mitophagy - animal
ocz04141
Protein processing in endoplasmic reticulum
ocz05014
Amyotrophic lateral sclerosis
ocz05022
Pathways of neurodegeneration - multiple diseases
ocz05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121172410
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121172410
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
121172410
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121172410
05022 Pathways of neurodegeneration - multiple diseases
121172410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121172410
03009 Ribosome biogenesis [BR:
ocz03009
]
121172410
04131 Membrane trafficking [BR:
ocz04131
]
121172410
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocz04147
]
121172410
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
121172410
Ribosome biogenesis [BR:
ocz03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
121172410
Membrane trafficking [BR:
ocz04131
]
SNARE
SNARE associated proteins
Others
121172410
Autophagy
Aggrephagy
Other aggrephagy associated proteins
121172410
Exosome [BR:
ocz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121172410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
121172410
NCBI-ProteinID:
XP_040860216
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGTGGSVYTEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggagccgattcaaagggtgatgacttatcaacagccattctcaagcagaag
aaccgtcctaatcggttaattgttgatgaagccattaatgaggacaacagcgtggtgtcc
ttatcccagcccaagatggatgaactgcagttgttccgaggtgacacagtgttgctgaaa
ggaaagaagaggcgggaagctgtgtgcattgtgctttctgatgacacatgttctgatgag
aagattcgaatgaatagagtggttcggaataacctgcgcgtacgcctaggggatgtcatc
agcatccagccatgccctgatgtgaaatatggcaaacgcatccatgtgctgcccattgat
gacacagtggaaggcatcactggcaatctgtttgaggtataccttaaaccatacttcctg
gaagcttatcgacccatccggaaaggagatattttccttgtccgtggtgggatgcgtgct
gtggagttcaaagtagtagagacggatcccagcccttactgcattgttgctccagacaca
gtgatccactgtgaaggggagcctatcaaacgagaggatgaggaggaatccttgaatgaa
gtgggctatgatgacattggtggctgcaggaagcagctagctcagataaaggagatggtg
gagctgcccttgagacatcctgccctcttcaaggcaattggtgtgaagccaccgcgggga
atcctgctgtatggacctcctggaacagggaagaccctgattgcccgagctgtggcaaat
gagactggggccttctttttcttgatcaatggtcctgagatcatgagcaagttggctggc
gagtcagagagcaaccttcgtaaagcctttgaggaagctgagaagaatgctcctgccatt
attttcattgatgaactggatgccattgctcccaaaagagagaaaactcatggggaggta
gagcggcgtattgtgtcacagttgttgacccttatggatggcctgaagcagagagcacat
gtaatagttatggcagcaactaacagacccaacagcattgatccggccctgcggcgattt
ggtcgctttgacagggaggtagatattggaatccctgatgctacaggacgcttggaaatt
cttcagatccataccaagaacatgaagctcgcagacgatgtggacctggaacaggtagcc
aatgagactcatgggcacgtgggtgctgacttagcagccctgtgttccgaggctgctctg
caggccatccgcaagaagatggatctcattgacctggaggatgagaccatcgacgctgag
gtcatgaactccctggcagttactatggatgatttccggtgggccttaagtcagagcaac
ccatcagcactgcgggaaactgtggtagaagtaccacaagtaacctgggaagacatcggg
ggcctggaagatgtcaaacgtgaacttcaggagttggtccagtatcctgtggagcatcct
gacaaattcctcaagtttggcatgacaccctccaagggagtcctcttctatgggcctcct
ggatgtggtaaaaccttgctggccaaggccattgcaaatgaatgtcaggccaacttcatc
tccatcaagggtcctgagctgctcaccatgtggtttggggaatctgaagccaacgttagg
gaaatctttgacaaggcccgccaagctgctccctgtgtactgttctttgatgagcttgat
tcaattgccaaggctcgtggtggtaacattggagatggtggtggggctgctgaccgagtc
atcaaccagatcctgacagagatggatggcatgtccacgaaaaagaatgtgttcatcatt
ggcgctaccaacaggcctgatatcattgatcctgccatcttgagacctggccgccttgat
cagcttatctacatcccacttcctgatgagaagtcccgtgttgctatcctcaaggccaac
ctgcgcaagtctcctgttgccaaggatgtggatttggaattcctggctaagatgactaat
ggcttctctggagctgatttaacagagatttgccaacgtgcttgtaaactggccatccgt
gaatccatcgagagtgaaattaggcgagaacgggagaggcagacaaacccatcagccatg
gaagtagaagaggatgatccagtgccagagattcgccgtgaccactttgaggaagccatg
cgttttgcccgccgttccgtcagtgacaatgacattcggaaatacgagatgtttgcccag
accctgcagcagagtcgaggctttggcagcttcagattcccttcagggaaccagggtgga
gctggccccagtcagggcagtggaggcggcacaggcggcagtgtgtatacagaagacaat
gatgatgacctgtatggttaa
DBGET
integrated database retrieval system
