Ochotona curzoniae (black-lipped pika): 121172498
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Entry
121172498 CDS
T11174
Symbol
STAG1
Name
(RefSeq) cohesin subunit SA-1 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121172498 (STAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocz03036
]
121172498 (STAG1)
Chromosome and associated proteins [BR:
ocz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
121172498 (STAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
RFX5_DNA_bdg
Cnd3
Motif
Other DBs
NCBI-GeneID:
121172498
NCBI-ProteinID:
XP_040860472
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MITSELPVLQDSTNETTAHSDAGSELEETEIKGKRKRGRPGRPPSTNKKPRKSPGEKSRI
EAGVRGPGRGRANGHAQQNGEGEPVTLFEVVKLGKSAMQSVVDDWIESYKQDRDIALLDL
INFFIQCSGCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFRSNFCE
FIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNL
SIHQDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHRY
RDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTN
RELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCENVYHLV
YSAHRPVAVAAGEFLHKKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEH
AAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEAMSDRQESALIELMVCTIRQAAEAH
PPVGRGTGKRVLTAKERKTQIDDRNKLTEHFIITLPMLLSKYSADAEKVANLLQIPQYFD
LEIYSTGRMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCSEEYTIQNRVDIARSQ
LIDEFVDRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFGNCYRLL
KTGIEHGAMPEQIVVQALQCSHYSILWQLVKITDGSPSKDVLIHAHKAKCVSQEDLLVLR
KTVKSFLAVCQQCLSNVNTPVKEQAFMLLCDLLMIFSHQLMTGGREGLQPLVFNPDPGLQ
SELLSFVMDHVFIDQDEENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMHAA
ADIFKHYMKYYNDYGDIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPNLDRTS
AHVSGIKELARRFALTFGLDQIKTREAVATLHKDGIEFAFKYQNQKGQEYPPPNLAFLEV
LSEFSSKLLRQDKKTVHSYLEKFLTEQMMERREDVWLPLISYRNSLVTGGEDDRMSVNSG
SSSSKTSSVRNKKGRPPLHKKRVEDETLESTWLNRTDTMIQTPGPLPAPQLTSTVLRENN
RPMAEQIQEPESEHGSEPDFLHNPQMQISWLGQPKLEDLNRKDRTGMNYMKVRTGVRHAV
RGLMEEDAEPIFEDVMMSSRSQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAI
IEDDSGFGMPMF
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgattacctcagagttgccagtgttacaggattcaactaacgaaactactgcccattct
gatgctggtagcgaacttgaagaaacagagatcaaaggaaaaaggaaaaggggtcgtcct
ggccggcctccatctacaaataagaaacctcgaaagtctccaggagagaagagcagaatt
gaagctggagttcgagggccgggccggggaagagctaatgggcatgcgcagcagaacggc
gaaggggagcctgtcacactgtttgaggtggtcaaactggggaaaagtgcgatgcagtcc
gtggtggatgactggattgaatcatataaacaagacagggacatcgcacttctggattta
atcaacttttttatccagtgttcaggatgtcgaggtactgtgagaatagagatgtttcga
aatatgcagaatgcagaaatcatcagaaaaatgactgaagaatttgatgaggacagtggt
gattaccctcttaccatgcctggaccgcagtggaaaaaattccgttccaatttttgtgag
tttattggagtcctgattcgacagtgtcagtacagcataatttacgatgagtacatgatg
gacacggtcatctccctcttgactggtttgtcagactcccaggtcagagcctttaggcac
acaagcacgcttgctgccatgaaactcatgactgccctggtgaatgtcgccttaaacctc
agtattcatcaggacaacacacagcggcagtatgaagccgagaggaataaaatgattggg
aagagagccaatgaacgactggagctgctgctgcagaaacgcaaagagctgcaagaaaat
caggatgaaattgaaaatatgatgaactctatttttaagggtatatttgttcatagatac
cgtgacgctattgctgagattagagccatttgtattgaagaaatcggagtgtggatgaag
atgtacagtgatgccttcctgaacgacagttatctgaaatatgttggctggactcttcac
gacaggcaaggggaagtcaggctcaagtgcttgaaagctctccagagtctgtacaccaac
agagagttattccccaaattggaactgttcaccaaccgattcaaggatcgcattgtatca
atgacacttgataaagaatatgatgttgctgtggaagctattcgattggttactctgata
cttcatggcagtgaagaagccctttctaatgaggactgcgaaaatgtttaccacttggtg
tactcagcacatcgccctgtcgcagtggcagccggagagttccttcacaaaaaattgttt
agcagacatgatccacaagctgaagaagcattagcaaaaagaaggggaaggaacagtccg
aatgggaacctcataaggatgctcgttctgttctttctggaaagtgagttacatgagcat
gcggcctacttggtggacagcttgtgggagagctctcaagaattgttgaaagactgggag
tgtatgacggagttgctgttagaggaacctgttcaaggagaggaagcaatgtctgatcgc
caagagagtgctcttatagagctaatggtttgtacaattcgccaagctgctgaggcacat
cctccagtgggaaggggtaccggcaagagagtgctaactgccaaagaaagaaaaactcaa
attgatgatagaaacaagttgactgagcattttatcatcacgctgcccatgcttctgtcg
aagtattctgcggatgcagagaaggtagcaaacttactacaaattccacagtattttgat
ctggaaatctatagcacaggcagaatggaaaagcatttggatgctttattaaaacagatt
aaatttgttgtggagaaacacgtagaatcagatgttctggaagcctgcagtaagacgtac
agcatcctgtgcagtgaggagtacaccatccagaacagggtggacatcgctcgcagccag
ctgattgacgagtttgtggatcgattcaatcactctgtggaggacctgctgcaggaggga
gaagaagctgatgacgacgacatttacaacgtgctttccactttgaagcggctaacttcc
tttcacaatgctcatgatctcacaaaatgggatctgtttggtaattgctacagattgttg
aagactggaattgaacatggagctatgccagaacagatagtcgtacaggcactgcagtgt
tcccattactccattctgtggcagttggtgaaaattactgatggctctccttccaaagat
gttctgattcatgctcacaaagctaaatgtgtctcacaggaggatttgttggtgttgagg
aaaacggtcaaatcctttctggctgtgtgccagcagtgcctgtcaaatgttaacacgcca
gtgaaggagcaggctttcatgttgctctgtgatctgttgatgatttttagccaccagtta
atgacgggtggcagagagggccttcagccgttggtgttcaatccagaccctgggcttcag
tcagagctcctcagcttcgtgatggaccacgtgttcattgaccaggatgaagagaaccag
agcatggagggtgatgaagaagatgaagctaataaaattgaggccttacataagagaagg
aacctgctggctgccttcagcaagctcatcatctacgacatagtggacatgcacgcggcc
gcggacatcttcaagcactacatgaagtattacaatgattatggtgatatcattaaggaa
acactgagtaaaaccagacagattgacaaaattcagtgtgccaaaacccttattctcagt
ttgcagcagttgtttaatgaacttgtccaagagcaaggccccaaccttgacaggacctct
gcccatgtcagtggcattaaggaactggcccgtcgatttgctctgacatttggacttgac
cagatcaagacaagagaagcagttgcgacacttcacaaggatggcatcgaatttgccttt
aaatatcagaatcagaaaggacaagagtacccacctcctaacctggcttttctcgaagta
ctgagtgaattttcttcaaaacttcttcggcaagacaaaaagactgttcactcgtacctg
gagaagttcctgaccgagcagatgatggaaaggagagaagatgtttggcttccactcatc
tcctacagaaattcactggtcactggtggtgaggacgacagaatgtcggtcaacagcgga
agcagcagcagcaaaacttcctcagtaaggaacaagaaaggacgacccccacttcacaaa
aagcgagtggaagatgagactctggagagcacgtggctaaacaggactgacaccatgatt
cagacgcccggccccctgccagcaccccagctcacgtccaccgtgctgcgggagaacaac
aggccgatggcagagcagatccaggagcccgagtcggagcatggctcggagcccgacttc
ttacacaatcctcagatgcagatctcttggttaggccagccgaaattagaagacttaaat
cggaaggacagaacaggaatgaactacatgaaagtgagaactggagtaaggcatgctgtc
cggggtctcatggaggaggacgccgagcccatcttcgaagacgtgatgatgtcatcccgg
agccagttagaagatatgaatgaagaatttgaagataccatggtcattgatctgccccca
tcaagaaaccggcgagagcgagcggagctgaggccagacttctttgactctgcagctatc
atagaagacgattcaggatttggaatgcctatgttctga
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