Ochotona curzoniae (black-lipped pika): 121172509
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Entry
121172509 CDS
T11174
Symbol
SEC16A
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec16A
KO
K20353
COPII coat assembly protein SEC16
Organism
ocz Ochotona curzoniae (black-lipped pika)
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocz04131
]
121172509 (SEC16A)
Membrane trafficking [BR:
ocz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121172509 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
121172509
NCBI-ProteinID:
XP_040860499
LinkDB
All DBs
Position
Unknown
AA seq
2222 aa
AA seq
DB search
MQPPPQAVPPSVAGPPPAGTPRGLLWVSSPYRKRTAGSAPTAPLPGPLQPVTDPFAFSRQ
TLQGPLPGNTPKNSLPAFQGPVPTGLSQCPGLPMPHASTGDGSQGPCEPAPGPASQSRAD
AGQLASGSPAVVLPGPLTDRAAEVGPGLQPDSWAPPHPPHYIPAVTPDKVSSGQPPASLP
RPDHELRASVPVPTAAPFPQPRPQVPEQWGPPPPSQRHSTYSEGSFQSAAPQIPPAPRQH
LGPGFDQQISAPAAGDGGGEVAFLQSRHLASSPFAPGQAFGQSCRTVNAWASPELRPHPG
MNREPVPGPALGSALLQENSPEGRLPHVAGSVASWALPEADSAARSRFFQRGERENQENL
PPEPAESAGASDRGGLSSSPGLGHLPLPALGGVGGTYQAEAAPPPWAETQPYLLQPGGVQ
RGAEVEGAGGVWGNARVAEGPGAGGARYDDENSEFAQNQEVLPREPPGPEPCVGDQFYGS
VPGYTVPRPSTADLAGAGGTNLEAPDAVSPTVCPDGVPGGYCAQGPRRLSGPARPQEPVG
TFIQQEVGKPEDDRPGSFFKQIDCSPVGGEVEDVGPGSRGYAPSRSQPSTPSPPKPVGVF
QTSANSSFEPVKSHLRPVEADRASMAGEVRESQSRLQRVLPDASPGNLEQPPDNMETLCP
PLGTPVEAGHGHPHPGAEKRPSARVQGIVKCESPVTTLWAQSELPDFSGSVLLAPAAPAV
SVPARPQPPAVMQPPEEGPPEVQSRPQLSRDGLGASGNLENPPELGAEEVLVRAGSAYAS
LLSWLPTESLQNQPVLIAQPDQSHDLAQPLNFSVSSSGPRDKSQGWGDAAAGETSVPGRD
SGDSTSGRGVPAGSAASPARGPQGPAAPEVPSSQPVASLAQLPSHPAPRNVAPESRKSDR
AGSVSSEPGGAGGTSGPENSKASRCRRPEGQRPGLPARWGCRVDRPPGAESPTAXPPQAS
RPGQLGPGVCDPAVCIDRWRQXQPGLEGAQQTPAAPQQQTSMPHAPTAAFSEGLPAQAQS
QQVPPASPAPADAGPQLLPRPPPSSSASALPAGSSQAAVRAEQPWLHPSTFGPPPQVLAP
YYYYRPLYEAYPPPYASPYAADPGPAALYYQDMYGYEPRYRPYDSAASAYAEAYRYAEPE
RPSSRASHCSDRPAARPSYPEAYLDAKSGWSSQTDYYGQYYSGQYDYGDRWERYHYGSRF
RDGQASERRYWHDSEYEPYGKESSAYGDRSDKCDDHWRYDPRITGSFDDDPEPPRDAYGE
DADRRSVHSEHSARSLRSVRSLQSRRSSLSAHSHQSQVYRNHMVSADAYEAPAPGSFHGG
YSDGAYSGNVNSGHGFPDYGYSADPSWHPGEQVLSRSTTPEKFSAPHLCARFGPGGQLLR
VVPNMPSDGQPALVEIHSMEILLQHTAEQEELRLFPGPLGKDDTHKVDVINFAQNKATKC
LQNENLVDKESAALLWDLVTLLCRQNGTVVGTDTAELLLRDHGTAWLPGKSPNEANLIDF
TNEVVEQAEEEPGEAQLSFLTDTPTAASALDKETERFRELLLYGRKKDALESAMKNGLWG
HALLLASKMDSRTHARVMTRFANSLPINDPLQTIYQLMSGRMPAASTCCGDEKWGDWRPH
LAMVLSNLNNNVDVESRTMVTMGDTLASKGLLDAAHFCYLMAQVGFGAYTKKTAKLVLIG
SSHSLPFFKFATNEAIQRTEAYEYAQSLGAHACTLPSFQVFKFIYSCRLAEMGLAAQALQ
YCEVIARTILLQPHWYSLVLVSQLAQVASQLRFFDPQLKEKPEEELFVEPLWLAQLRQVE
GQMKEGTLLWSHERAGPQPCPSTPGSGGEPSDSPGFNNPLLAPPPVPSAEHPGHGVRLLP
SAPQVLPDGPLAEPARVPMFSVLPAPGLLEPGPSYGSPGSVLGFPEPPKPEPTAPCPGPG
MSGTSTLQEPRNQDPGVLPLQGSAAGDALAEHPEEEFAENVPGLSSPRSVTDGETPGSWD
RADVASTQPPSPVPVVKKAKEEKKSESWFSRWLPGKRRVEAYLPDDKNKSIVWDEKKNQW
VNLNEPEEEKKAPPPPPTAFPRAPPAAPAASVNVFSRKAGGTRARYVDILNPGGAQRREP
APAPADFFAPLAPLPIPANLFVPNPDAEEAQPVDGAGREGQAPAEHLSNPEPALSPKASG
GVLPPGPDVPLSRPDGLQGGEAPADPGAPVPLYSPARLAPAPAVSGSTRLGRIGQRRYAP
LN
NT seq
6669 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgccgccccaggcagtcccacccagtgtggctggccctcctccggcggggacc
cctcgcgggctgctctgggtcagcagcccctacaggaagcggactgctggttcggccccg
acagccccgctgcccggccccctgcagcctgtgaccgatccatttgccttcagcagacag
acactgcaaggccccctgcctggcaacacccccaagaacagcctgcctgcttttcagggc
ccagtgccaacagggctctcccagtgcccgggcttgcctatgccccacgccagcactgga
gacggctcccagggaccctgtgaacctgcgccggggcctgcatcgcagtccagagccgat
gctggtcagcttgctagtggatcgcccgccgtggtgttgccggggcctctgacggacagg
gctgcagaggtcggccccggcctgcagccagacagttgggcccccccgcatccacctcac
tacattccagccgtgactcctgacaaggtttccagcggccagccgcctgccagcctgcct
cggcctgaccatgagctgcgtgccagcgtgccggtacccacagcggcccccttccctcag
cctcgcccgcaggtgccagaacagtggggcccaccgcccccaagccagcggcattccacc
tactccgaaggctcatttcagagcgcagcaccccagatcccccctgcaccccgccagcat
ctggggccaggtttcgaccagcagatctcagcacctgcggcgggagatggagggggcgag
gtggccttcttgcagagccgccacctcgcgtccagcccctttgctcctggacaggcattc
gggcagagctgcaggacggtgaacgcatgggccagcccagagttgcggccacatccaggg
atgaacagggaacctgtgccagggccggccctggggagtgcccttctgcaggagaatagc
cccgaaggccgtttgccgcacgtcgcgggctctgtggccagctgggccctgccggaggcc
gactccgcggcgcgctcgaggtttttccagaggggggagagagagaaccaggagaatctc
ccaccggagccggcggagtctgctggcgcctcagaccgcggtggtctgtcctccagcccg
ggcctgggccatctgcccctgcctgccctcggaggagtgggaggcacgtaccaagccgag
gccgcgccaccgccgtgggcagagacacagccgtacctccttcagcccggaggcgtccag
cgcggcgcggaggtggagggtgctggcggtgtgtggggcaacgctcgggtcgccgagggg
cccggagctgggggcgcccggtacgatgatgagaactcagagtttgctcagaaccaggag
gtcctgcctcgtgagcccccgggcccagaaccctgtgtgggcgaccagttctacgggtcc
gttccaggttacaccgtccccaggcccagcactgcggaccttgctggagcggggggcacg
aaccttgaggcccccgacgccgtctcccccactgtgtgccctgacggcgtgcctggtggc
tactgtgcccagggccccaggaggctgtccggtccagccaggccgcaggagccggtcggc
accttcatccagcaggaggtcgggaagcccgaggacgaccgcccggggagtttctttaag
cagattgattgctctcctgtcgggggagaggtggaggacgtgggtcccgggagccgcggc
tacgcccccagccggtctcagccctcgactcccagcccccctaaacctgtgggcgtgttc
cagacgagcgccaacagctcttttgagccggtcaagtcccacttaagaccagttgaggcg
gatcgtgccagcatggcgggtgaagtgagagagtcccaaagccggctgcagcgcgtgctg
cccgacgcctcccctgggaacctggaacagccgccagacaacatggagacgctctgcccg
cctctaggcacccctgtggaagccgggcatgggcacccacatccaggggctgagaagagg
ccctcggctagggtgcagggcatcgtgaagtgtgagagcccagtgaccacgctgtgggcc
cagagtgagcttccggactttagtggaagtgtcctgctggcgcccgccgcccccgccgtg
tccgtgcccgcacggcctcagccacctgcggtcatgcagcccccagaggaggggccgcca
gaggtgcagtcccggccacagctgagccgagacggcctgggtgcctcggggaacctggag
aaccctcccgagctgggggccgaggaggtgcttgtgcgggcaggctctgcctatgccagc
ctgctgtcttggctgcccacggagtccctgcagaatcagcctgtcttgatcgcccaaccc
gatcagagccatgacttggctcagccccttaatttttctgtgtcctcgtcaggcccccgt
gacaagagccagggctggggggatgctgcggcaggagagacatcagtgcctggcagggac
tccggggacagtacatctgggcgcggggtcccagctggctctgccgccagcccggcccgg
ggtccccaaggccctgctgctcctgaggtgccctccagccagcccgttgcttcgctggct
cagctgccatcccacccggctcccaggaacgtggccccagaaagccgcaagagtgaccgt
gcaggcagtgtctcctccgagcccggcggggcaggcggcacctcggggcctgagaacagt
aaggcaagtcgctgtcggcgcccggaggggcagaggcctgggcttcccgcccggtggggc
tgccgagtggacaggccgcccggtgcagagagcccaactgcttagcccccgcaggccagt
cggcctggccagctcgggcctggggtatgtgacccggctgtttgcattgacaggtggcga
cagnagcagcctggcttagaaggagcccagcaaaccccagccgccccccagcagcagacc
tccatgccacatgcacccacagcagcgttctctgagggcctgcctgcccaggcacagtcc
cagcaggtgccaccggccagtcccgctccagctgacgcgggcccacagttactaccacgg
ccacctccgtcttccagcgcctcggcgctgcctgctggctcgagtcaggcagccgtgcgg
gcggagcagccgtggctgcaccccagtacgtttggcccaccgcctcaggttctggcccct
tactactattacaggcccttgtacgaggcctacccgccgccgtacgcctcgccctacgcg
gcagaccctggccctgctgccctctattaccaggacatgtacgggtacgagcctcgttac
aggccctacgacagcgcagcatctgcgtacgccgaggcctaccgctacgcggagcccgag
agacccagctcgcgagcaagtcactgctcagaccggcctgctgccaggccgagctacccg
gaagcttacttggacgccaagagcggctggagcagccagactgactactacggccagtac
tactcgggccagtatgactacggagaccgctgggagcgctaccactacggctctaggttc
cgggacggccaggccagcgagcggaggtactggcacgacagcgagtacgagccgtacggg
aaggagagctcggcttacggcgacaggtctgacaagtgcgatgaccactggaggtatgac
ccccgcatcacgggcagcttcgacgacgaccccgagccgccccgcgatgcctacggggag
gacgcggaccggcgcagcgtgcacagtgagcactcggcccggagcctgcgcagcgtgcgg
agcctgcagagccgacgcagcagcctcagcgcccactcgcaccagagtcaggtttacagg
aaccacatggtgtcggccgatgcctacgaggccccggcgccgggctcctttcacggtggt
tactcggatggcgcctacagcggcaacgtcaacagtggccacggcttcccagactacggt
tactccgccgaccccagctggcaccctggggagcaagttctgtctagatccacgacaccc
gagaagttctcggcgcctcatctctgcgccaggttcggtcctggtggtcagctccttcga
gtggttccaaacatgccctcggacgggcagccagcgctggtggagatccacagcatggag
atcctgctgcagcacacggccgagcaggaggagctacgtttgttcccaggccctcttggc
aaagatgacacccataaagtggatgttattaattttgcgcagaacaaagctacaaagtgt
ttgcagaatgaaaatttagttgacaaagaatctgcagctctcctgtgggacttggtcacc
ctgctgtgcagacagaacgggaccgtggtgggaacggacactgcagagctgctgttacga
gaccacgggaccgcgtggcttcctgggaagtcgcccaacgaggcgaacctgatcgacttc
acgaacgaggtcgtggagcaggcggaggaggagcccggggaggcgcagctctcgttcctc
accgacacgccgacggccgccagcgcgctggacaaggagacggagcgcttccgagagctg
ctgctctacggccgcaagaaggatgcgttagagtctgcaatgaaaaacggcctgtggggg
cacgcgctgttgcttgcgagcaagatggacagccggacacacgcccgcgtcatgaccagg
tttgccaacagcctgcccatcaacgaccctctgcagaccatctatcagctcatgtctggg
cgcatgcctgccgcgtccacgtgctgtggagacgagaaatggggagactggagaccccat
ctggctatggttttgtccaacttgaacaacaatgtggatgttgagtccaggacgatggtg
acaatgggcgacactctagcctccaagggcttgctggacgccgcgcacttctgctacctc
atggcccaggtgggattcggggcgtacacgaagaaaacggccaagttggtgctgatcgga
tccagtcacagtttgccgtttttcaagtttgccaccaatgaagccattcagaggaccgaa
gcttacgagtatgcccagtccctgggcgcccacgcctgtaccctgcccagcttccaggtg
ttcaagttcatctactcctgccgcctggcggagatggggctcgccgcccaggccctgcag
tactgcgaggtgatcgccaggaccatcctgctgcagccacactggtactccctggtgctg
gtcagccagctagctcaggtggcctcccagttacggttcttcgaccctcagctgaaggag
aagccggaggaggagctgtttgtggagcctctgtggctggcccagctgcgacaggtggag
gggcagatgaaggagggcacattgctgtggagccacgagagggccggccctcagccgtgt
cccagcacgccaggctctgggggagagccatccgacagcccggggttcaacaaccccttg
ctggcaccaccgccagtgccaagtgccgagcacccaggccatggagtgcggctgctgcct
tcagctccccaggtgctccctgacggcccgctggccgaacccgccagggtgcccatgttc
tcagtgctgccagccccggggctgctggagccaggccccagctatggatctccgggctct
gtgcttggcttccctgagccccccaagcctgagcccacagctccatgcccaggacctggc
atgtcaggcacctcaacactgcaggagccccggaaccaggacccaggggttctgccgctg
cagggctcagctgctggagacgcgctggccgagcaccccgaggaggagttcgccgagaac
gtcccgggcctgagctccccgagatccgtgacagacggagagacccccgggagctgggac
cgtgctgacgtggcgtccacgcagccgccctctcctgtgcccgtggtcaagaaggccaaa
gaggaaaagaagagtgagtcgtggttctcgcgctggctacctgggaagagaagggtggaa
gcctacctgccagatgacaagaacaagtcgattgtttgggatgaaaagaaaaaccagtgg
gtgaatctaaacgagccagaagaggagaagaaggccccgcccccgccgcccacggccttc
cccagggctccgccagcagcccccgcagcctctgtgaacgtgttttctagaaaagcaggt
ggaacccgagcccgctacgtggacatcctcaaccctggcggggcccagcggcgggaacca
gctccggctcccgccgacttcttcgccccgcttgcgccactcccgattcctgctaacctg
tttgtaccaaatccagatgcagaagaagcacagcctgtggatggggctggcagggagggc
caggcaccagccgagcacctgagcaacccagagcctgctctgtcacccaaggcgtctggt
ggtgtgctgccccctgggcctgacgtccccctttccagaccagacggcttgcagggagga
gaggcccctgcagaccccggagctcctgtgcccttgtacagccctgcacgcttggctccg
gcccctgccgtctccgggagcacgaggctggggcggatcggccagaggagatatgcccct
ttgaactag
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