Ochotona curzoniae (black-lipped pika): 121172528
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Entry
121172528 CDS
T11174
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ocz Ochotona curzoniae (black-lipped pika)
Pathway
ocz03013
Nucleocytoplasmic transport
ocz03015
mRNA surveillance pathway
ocz03040
Spliceosome
ocz05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ocz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121172528 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
121172528 (NCBP1)
03015 mRNA surveillance pathway
121172528 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
121172528 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocz03019
]
121172528 (NCBP1)
03041 Spliceosome [BR:
ocz03041
]
121172528 (NCBP1)
Messenger RNA biogenesis [BR:
ocz03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
121172528 (NCBP1)
Spliceosome [BR:
ocz03041
]
Common components
Common spliceosomal components
Cap binding complex
121172528 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Cob_adeno_trans
DUF1690
Motif
Other DBs
NCBI-GeneID:
121172528
NCBI-ProteinID:
XP_040860513
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKASDANKTEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSTYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDLESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPAN
PTCVYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFIRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRGSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgagaacgacggtggacaacctcacaaaaggagaaag
gcctctgatgcaaacaaaactgaagatcatttggaatctttaatatgcaaagtgggagaa
aagagtgcctgctctttggagagcaatctggaaggtttggctggtgttttagaagctgat
cttcctaactacaagagcaagatcttaaggcttctttgtacagttgcacgtctgctgccg
gagaagttgaccatatatacaactttggttggcctgctgaatgccaggaattacaacttc
ggtggagaatttgtagaagccatgatccgtcaactgaaagaatcgctgaaagcaaacaat
tacaatgaagctgtatatttggtgcgttttttgtctgatcttgtgaattgtcatgtgatc
gctgccccgtcaatggttgctatgtttgaaaattttgtaagcgtaactcaggaagaagat
gtgcctcaggtgcggcgggattggtatgtgtatgcatttctgtcatctttgccttgggtt
ggaaaggagttgtacgaaaagaaggatgcagagatggaccgcatctttgccaacactgaa
agctatcttaaaagacgccagaagactcatgtgcccatgttacaagtatggactgctgat
aaaccacatccacaagaagagtatttagattgcctgtgggcccagattcagaaattgaaa
aaggatcgctggcaggaacggcacatcctaagaccctatcttgcctttgacagcatcctg
tgtgaagcactgcagcacaacctgcctcctttcacaccacctccacacacggaagactcc
acgtaccccatgccaagggtcatcttcaggatgtttgactatacggatgaccctgagggt
cctgttatgccagggagtcattcggtggaaagatttgtaatagaagagaatcttcactgt
atcattaagtcccattggaaggaaaggaagacttgtgctgcacagctagtgagctatcca
gggaagaacaagatccctttgaattaccacatagttgaggtgatctttgcagagctgttc
cagcttccagcaccccctcatattgatgtgatgtacacaacactgctcattgaactgtgc
aaacttcagcctggctctctgcctcaagttctggcacaagcaactgaaatgttatatatg
cgtttggacactatgaatactacatgtgtagacaggtttattaattggttttctcaccat
ctaagtaactttcagttccgttggagctgggaagattggtcagattgtcttacacaagat
cttgaaagtcccaaaccaaagtttgtacgagaagttctagaaaaatgtatgaggttgtct
taccatcagcgtatattagatattgttcctcctaccttctcagctctgtgtcctgcaaat
ccaacctgcgtttacaagtatggagatgaaagcagcaattctctgcctggacattctgtg
gccctctgtttggctgttgcctttaaaagtaaagcaaccaatgatgaaatattcagcatt
ctaaaagatgtaccaaaccccaaccaggatgatgatgatgatgaaggattcagttttaat
ccattaaaaatagaagtgtttgtacagactctgctccacttggcagccaaatcattcagc
cactccttcagtgctcttgccaagtttcatgaagtcttcaaaacgctagcagaaagtgat
gaaggaaagttgcatgtgctgagagttatgtttgaggtttggaggaaccatccacagatg
attgctgtactggtagataagatgattcgtacacagattgttgactgtgctgcagtagca
aattggatcttctcttcagaactctctcgtgattttatcagattgtttgtttgggaaatc
ttgcattccacaattcgaaaaatgaataaacacgttctaaagatccagaaggagctagaa
gaagctaaagagaaactcgcaaggcaacataaacgccgaagtgatgatgatgacagaggc
agtgataggaaagatggggcgctggaggagcaaatagagagactgcaggagaaggtagaa
tctgctcagagtgagcagaagaacctcttcctcgtcatatttcagcgctttatcatgatc
ttgactgaacatctggtgaggtgcgagactgacgggaccagtgtactgacaccatggtat
aagaactgcatagaaaggctccagcagatcttccttcagcaccaccagatcatccagcag
tacatggtgaccctggagaacctgctcttcaccgctgagctagaccctcatatccttgcc
gtgttccagcagttctgtgccctgcaggcctaa
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