Oryx dammah (scimitar-horned oryx): 120851557
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Entry
120851557 CDS
T07255
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120851557 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oda04121
]
120851557 (TRIM54)
Ubiquitin system [BR:
oda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120851557 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-B_box
zf-RING_5
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_6
TRIM_CC
PHP
Sina_RING
CoiA_N
DUF349
Mod_r
DUF1421
FlgN
Zn_ribbon_FGT1_2
DD_DDX21-DDX50
COG2_C
MIF4G_like_2
DUF5799
GH123_cat
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
120851557
NCBI-ProteinID:
XP_040080328
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRSSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEENSRRQKQLLNQRFEGLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELAG
RPEPGYERMDQFTVSVEHVAEMLRTIDFQPGTSGEEEDEEVAVEGEEGNAGPEEERTDGR
ESTGQH
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacggtgggtttcaagccgctgctaggggatgcacacagcatggacaacctg
gagaagcagcttatttgccccatctgcctggagatgttctccaaaccggtggtgatcctc
ccctgccagcacaacctgtgtcgcaagtgcgccaacgacgtcttccaggcctcgaaccct
ctgtggcagtcccgaagctccaccactgtgtcttcggggggccgtttccgctgcccatct
tgcaggcacgaggtagtcctggaccgacatggtgtctacggcctgcagcggaacctgctc
gtggagaatattatcgacatttacaagcaggagtcctcccggccactgcattccaaggct
gagcagcacctcatgtgtgaggagcatgaagacgagaagatcaacatctactgtctgagc
tgtgaagtgcccacctgctctctctgcaaggtctttggtgcccacaaggactgtgaggtg
gccccactgcccaccatttacaaacgccagaagagtgagctcagtgatggcatcgcgatg
ctggtggccggcaatgaccgtgtgcaagcagtgatcacacagatggaggaggtgtgccag
accatcgaggaaaacagccggaggcagaagcagttgctgaaccagagatttgagggcctg
tgtgcagtgctggaggagcggaagggcgagctgctgcaggcgctggcccgggagcaggag
gagaagctgcagcgagtcaggggcctcatccgccagtatggagaccacctggaggcctcc
tctaagctggtggagtctgccatccagtccatggaggagccgcagatggcgctctacctg
cagcaggccaaggagttgatcaataaggtcgggacgatgtcgaaggtggagctggccggc
cggccggagccgggctatgaaagaatggatcaattcaccgtgagcgtggagcatgtggcg
gaaatgctgaggaccattgacttccagccaggcacttctggggaggaagaggatgaggag
gtcgcggtagaaggggaagagggcaacgcaggaccagaggaagagcggacggatgggcgg
gaaagcacaggccagcactga
DBGET
integrated database retrieval system
