KEGG   Oryx dammah (scimitar-horned oryx): 120851730
Entry
120851730         CDS       T07255                                 
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
oda  Oryx dammah (scimitar-horned oryx)
Pathway
oda01524  Platinum drug resistance
oda03430  Mismatch repair
oda05200  Pathways in cancer
oda05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:oda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    120851730 (MSH2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    120851730 (MSH2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    120851730 (MSH2)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    120851730 (MSH2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oda03400]
    120851730 (MSH2)
DNA repair and recombination proteins [BR:oda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     120851730 (MSH2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV MutS_I AAA_27
Other DBs
NCBI-GeneID: 120851730
NCBI-ProteinID: XP_040080671
LinkDB
Position
Unknown
AA seq 934 aa
MAVQPKDTLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHQEDALLAAREVFKT
QGVVKYMGPAGAKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDATQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVIPGGETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQD
LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKYEGKHQALLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTFNDVLA
QLDAVVSFAHVSNAAPVPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGKPQGCDEMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMS
EESITRKLKQLKAEVIAKNNSFVNEIISRIKVTA
NT seq 2805 nt   +upstreamnt  +downstreamnt
atggcggtgcagccgaaggacacgttgcagctggagagcgcggccgaggtcggctttgtg
cgcttcttccaaggcatgccggagaaaccgaccaccacagtgcgcctttttgaccgaggt
gacttctacaccgcgcaccaggaggacgctctgctggccgcccgcgaagtgttcaagacc
cagggggtggtcaagtatatgggcccggcaggagcaaagactctggagagtgttgtgctc
agtaaaatgaattttgagtcttttgtaaaagatcttcttctagttcgtcagtacagagtt
gaagtttataagaacagagctggaaataaggcctccaaggagaatgattggtatttggca
tttaaggcttctccaggtaatctttctcagtttgaagatattctctttggtaacaacgat
atgtctgcttccattggtgttgtgggtgttaaaatgtctacagtcgatggtcaaagacag
gtcggagttgggtatgttgacgccacacagaggaagctgggactgtgtgagttccccgat
aatgatcagttctccaatctggaggctctcctgattcagattggaccaaaggagtgtgtt
ataccaggaggggagactgctggagacatgggaaaactgaggcaggttattcagagagga
ggaattttgattacagaaagaaaaagagctgacttttccacgaaagatatttatcaggac
ctcaaccggttgttgaaaggcaagaagggagaacagatgaatagtgctgtcttgccagaa
atggagaaccaggttgcagtttcttccttgtctgcagtaatcaaatttttagaactctta
tcagatgactcaaactttggacagtttgaactgactacttttgacttcagccagtacatg
aaattggatattgcagcagtgagagcccttaaccttttccagggttctgttgaagatact
tctggctctcagtctctggccgcattgctgaataaatgtaaaacccctcaaggacaaagg
ctggttaaccagtggattaagcagcctcttatggacaagaacagaatagaagagagatta
aatttggtcgaagcttttgtagaagatgcagaattgaggcagagtttacaagaagattta
cttcgtcgatttccagatcttaaccgacttgccaagaaatttcaaagacaagcggcaaat
ttacaagattgttaccgactgtatcagggtataaatcaactccctaatgttattcaggct
ttggaaaaatacgaaggaaaacatcaggcattgttgctggcagtttttgtgactcctctt
attgatcttcgttctgacttctccaagtttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcctaacttgagtgaa
ttaagagaaataatggatgacttagaaaagaagatgcagtcaacattagtaagtgcagct
agagatctaggcttagatcctggcaaacagattaaactggattccagcacacagtttggc
tattatttccgagtaacgtgcaaggaagaaaaagtccttcgtaataataaaaatttcagt
acagtagatatccagaagaatggtgttaaatttacaaacagtaaactgacttctctcaat
gaagagtataccaaaaataaaactgaatatgaggaagcccagaatgccattgttaaagaa
attgtcaatatttcttcaggctatgtagaaccgatgcagactttcaacgacgtgttagct
cagctggatgctgttgtcagctttgctcatgtgtccaatgcagcacctgttccatatgta
cggccagtcattttggaaaaaggacgagggagaattacactgaaagcatccagacatgct
tgtgtggaagttcaagatgaagtcgcatttattcctaatgatgttcactttgaaaaagat
aaacaaatgttccacatcattactggtcccaacatgggagggaaatcaacatatattcgc
cagactggggtggtagttctcatggcccagattgggtgttttgtgccatgtgagtgggca
gaagtgtccattgtggactgcatcttggcccgggtaggggctggtgacagtcagttgaaa
ggagtctccacgtttatggctgaaatgttagaaactgcttctattctcaggtctgcaacc
aaagattccttaataatcatagatgaattgggaagaggaacctctacctatgatggattt
ggattagcgtgggctatatcagagtacattgcaacgaagatcggtgctttttgcatgttt
gcaacccattttcatgaacttacagccttggccaatcagataccaactgttaataatctg
catgtcacagcactaactactgaagagactctaactatgctttatcaggtgaagaaagga
gtctgtgatcaaagttttgggattcatgttgctgagcttgctaatttccccaggcatgta
atagagtgtgccaaacagaaagccctggagttggaggagtttcagaatattgggaaacca
cagggatgtgatgaaatggaaccagcagcaaagaggtgctatctggaaagagagcaaggt
gaaaaaattattcaagaatttctgtccaaggtaaagcaagtgccctttactgaaatgtca
gaagaaagcatcacaagaaagttaaaacagctaaaagctgaggtgatcgcaaagaataat
agttttgtaaatgaaatcatttcccgaataaaagtaactgcgtga

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