Oryx dammah (scimitar-horned oryx): 120851730
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Entry
120851730 CDS
T07255
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda01524
Platinum drug resistance
oda03430
Mismatch repair
oda05200
Pathways in cancer
oda05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120851730 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
120851730 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
120851730 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
120851730 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oda03400
]
120851730 (MSH2)
DNA repair and recombination proteins [BR:
oda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
120851730 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
120851730
NCBI-ProteinID:
XP_040080671
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MAVQPKDTLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHQEDALLAAREVFKT
QGVVKYMGPAGAKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDATQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVIPGGETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQD
LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKYEGKHQALLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTFNDVLA
QLDAVVSFAHVSNAAPVPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGKPQGCDEMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMS
EESITRKLKQLKAEVIAKNNSFVNEIISRIKVTA
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggacacgttgcagctggagagcgcggccgaggtcggctttgtg
cgcttcttccaaggcatgccggagaaaccgaccaccacagtgcgcctttttgaccgaggt
gacttctacaccgcgcaccaggaggacgctctgctggccgcccgcgaagtgttcaagacc
cagggggtggtcaagtatatgggcccggcaggagcaaagactctggagagtgttgtgctc
agtaaaatgaattttgagtcttttgtaaaagatcttcttctagttcgtcagtacagagtt
gaagtttataagaacagagctggaaataaggcctccaaggagaatgattggtatttggca
tttaaggcttctccaggtaatctttctcagtttgaagatattctctttggtaacaacgat
atgtctgcttccattggtgttgtgggtgttaaaatgtctacagtcgatggtcaaagacag
gtcggagttgggtatgttgacgccacacagaggaagctgggactgtgtgagttccccgat
aatgatcagttctccaatctggaggctctcctgattcagattggaccaaaggagtgtgtt
ataccaggaggggagactgctggagacatgggaaaactgaggcaggttattcagagagga
ggaattttgattacagaaagaaaaagagctgacttttccacgaaagatatttatcaggac
ctcaaccggttgttgaaaggcaagaagggagaacagatgaatagtgctgtcttgccagaa
atggagaaccaggttgcagtttcttccttgtctgcagtaatcaaatttttagaactctta
tcagatgactcaaactttggacagtttgaactgactacttttgacttcagccagtacatg
aaattggatattgcagcagtgagagcccttaaccttttccagggttctgttgaagatact
tctggctctcagtctctggccgcattgctgaataaatgtaaaacccctcaaggacaaagg
ctggttaaccagtggattaagcagcctcttatggacaagaacagaatagaagagagatta
aatttggtcgaagcttttgtagaagatgcagaattgaggcagagtttacaagaagattta
cttcgtcgatttccagatcttaaccgacttgccaagaaatttcaaagacaagcggcaaat
ttacaagattgttaccgactgtatcagggtataaatcaactccctaatgttattcaggct
ttggaaaaatacgaaggaaaacatcaggcattgttgctggcagtttttgtgactcctctt
attgatcttcgttctgacttctccaagtttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcctaacttgagtgaa
ttaagagaaataatggatgacttagaaaagaagatgcagtcaacattagtaagtgcagct
agagatctaggcttagatcctggcaaacagattaaactggattccagcacacagtttggc
tattatttccgagtaacgtgcaaggaagaaaaagtccttcgtaataataaaaatttcagt
acagtagatatccagaagaatggtgttaaatttacaaacagtaaactgacttctctcaat
gaagagtataccaaaaataaaactgaatatgaggaagcccagaatgccattgttaaagaa
attgtcaatatttcttcaggctatgtagaaccgatgcagactttcaacgacgtgttagct
cagctggatgctgttgtcagctttgctcatgtgtccaatgcagcacctgttccatatgta
cggccagtcattttggaaaaaggacgagggagaattacactgaaagcatccagacatgct
tgtgtggaagttcaagatgaagtcgcatttattcctaatgatgttcactttgaaaaagat
aaacaaatgttccacatcattactggtcccaacatgggagggaaatcaacatatattcgc
cagactggggtggtagttctcatggcccagattgggtgttttgtgccatgtgagtgggca
gaagtgtccattgtggactgcatcttggcccgggtaggggctggtgacagtcagttgaaa
ggagtctccacgtttatggctgaaatgttagaaactgcttctattctcaggtctgcaacc
aaagattccttaataatcatagatgaattgggaagaggaacctctacctatgatggattt
ggattagcgtgggctatatcagagtacattgcaacgaagatcggtgctttttgcatgttt
gcaacccattttcatgaacttacagccttggccaatcagataccaactgttaataatctg
catgtcacagcactaactactgaagagactctaactatgctttatcaggtgaagaaagga
gtctgtgatcaaagttttgggattcatgttgctgagcttgctaatttccccaggcatgta
atagagtgtgccaaacagaaagccctggagttggaggagtttcagaatattgggaaacca
cagggatgtgatgaaatggaaccagcagcaaagaggtgctatctggaaagagagcaaggt
gaaaaaattattcaagaatttctgtccaaggtaaagcaagtgccctttactgaaatgtca
gaagaaagcatcacaagaaagttaaaacagctaaaagctgaggtgatcgcaaagaataat
agttttgtaaatgaaatcatttcccgaataaaagtaactgcgtga
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