Oryx dammah (scimitar-horned oryx): 120852067 Help Entry 120852067         CDS       T07255                                  Symbol NUP188 Name (RefSeq) nucleoporin NUP188   KO K14311   nuclear pore complex protein Nup188 Organism oda  Oryx dammah (scimitar-horned oryx) Pathway oda03013   Nucleocytoplasmic transport oda05014   Amyotrophic lateral sclerosis Brite KEGG Orthology (KO) [BR:oda00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     120852067 (NUP188)  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     120852067 (NUP188)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oda03019]     120852067 (NUP188) Messenger RNA biogenesis [BR:oda03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      120852067 (NUP188) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Nup188_N-subdom_III Nup188_N Nup188_SH3-like HEAT_SCC3-SA DUF4912 Gar1 Motif Other DBs NCBI-GeneID:  120852067 NCBI-ProteinID:  XP_040081270 LinkDB All DBs Position Unknown AA seq 1751 aa AA seqDB search MAAAAGGPCVRSSRELWTILLGRSALRELNQIEAELNKHWQRLLEGLSYYKPPSPSSAEK VKASKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQA LILKIADYYYDERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVTKYRQQFEEL YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKMFK EQGFGTRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG LICQDMDRLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR LLRSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDVIDTACEVLADPSLPELF WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH KPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT LFTCEVEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRVYMLLQRL TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLLHTGFLPFVAHQVSNMSQMISAEGMNA GGYGNLLMNSEQPQGEYGVTVAFLRLITTLVKGQLGSTQNQGLVPCVMFVLKEMLPSYHK WRYNSHGVREQIGCLILELIHSILNLCHETDLHSSHTPSLQSLCICSLAYTEAGQTVINI MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA LTQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDA FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGVWSCLH AVLELIGSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT LSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSSEKRFAYWSGYVK SLAVHMADTEGSSCTSLVEYQMLVSAWRMFLIIATSHAEITHLTDSAVRRQLFLDVLEGT KALLLVPASVNCLRLGSMTCTLLLILLRQWKRELGSVDEILGPLTEILEGVLQADQQLME KTKAKVFSAFITVLQMKEMRVNDIPQYSQLVLNVCETLQEEVIALFDQTRHSLAAGSATE DKDSMETDDCSRLRHKDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLFTTL EVSLRMKQNLHFTEAALHLLLTLARTQQGAMAVAGAGITQSICLPLLSVYQLSTNGTVQT PGTSRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERTLQCLNAVRTV QSLACLEEADHTVGFLLQLSSFRKEWHFHLPQLMRDVQVNLGYLCQACTSLLHSRKVLQH YLQNKNGEGIPSAVTPRAQRPPAAAPAASSCSSSKQPTPDTEASEQRALRTVQYGLLRIL SRTLAALRRFTPDVCQVLLDQSLDLAEYSFLFALSFTTPTFDSEGAPSFGTLLATVNVAL NMLGELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAMRYLRDPAVHPR DKQRMKQELSSELSTLLSSLSRYFRRGAPSSPAAGVLPSPQGKSTSLSKVSPESQEPLIQ LVQAFVRHMQR NT seq 5256 nt NT seq  +upstreamnt  +downstreamnt atggcggctgccgccggcggtccgtgtgtgaggagcagtagagaactgtggacaattctg ctaggaaggtcagctctgagagaactgaatcagattgaggcagagctgaataaacattgg cagcggctgttagaaggactttcttactataaacctcccagtccaagttcagctgaaaaa gtgaaagctagtaaagatgtagcttcaccactgaaggaactgggtttaagaatcagcaag tttttgggtcttgatgaagaacagagtgtgcagttactccagtgttaccttcaagaggat tacagaggtactcgggactcactaaagacggtgctgcaagatgagaggcagagccaggcc ttaatcctgaagattgcagattattactatgatgaaagaacctgtattcttcgttgtgtc ttacaccttctcacttatttccaagatgaaagacacccctacagggttgaatatgccgac tgtgtggataaattggaaaaggagttagttacaaaatatagacagcagtttgaagagctt tataaaactgaagcaccaacatgggagacacatggaaatctcatgactgagcgccaggtg tctcgctggtttgttcagtgccttcgggagcagtccatgctgctagaaattattttcctg tattatgcatactttgagatggcacctagtgacctattggtgttaaccaagatgtttaaa gagcaaggatttggtactaggcagactaacaggcacctggtagatgagaccatggatcct tttgtggatcggattggctacttcagtgcccttatcctggtggaaggcatggatattgaa tccttgcataagtgtgctttggatgacagaagagaactgcaccagtttgcccaggatgga cttatttgtcaggatatggaccgtttgatgttgacctttggggacattccgcatcatgcc ccagtgctcttggcatgggccctcctccgtcacactctgaatccagaagagacgagcagt gtggtccggaagataggggggacagccatccaactgaatgtctttcagtacttgacccga ctgctccgctcgctggccagtgggggaaatgactgtaccaccagtactgcgtgcatgtgt gtctatggactcctttcttttgtcctgacctccctggagctgcacaccctgggcaaccag caggatgtaattgacacagcatgtgaagtcctggcagacccttctctcccagaactgttc tggggaacagaaccaacctctggtcttgggatcattctggacagtgtatgtggaatgttt ccccatctcctctctccactcctgcagttgcttcgagcccttgtatcagggaagtctact gctaagaaggtgtatagtttcttggataagatgtctttctacaatgaactctataagcac aagccccatgatgtgatctcccatgaagatggaaccctttggcggaggcaaacacccaaa ctcctttaccctctagggggtcagaccaaccttcgcatacctcaaggcactgtgggccag gtgatgctggacgatagggcctacctggtgcgctgggaatactcgtatagcagctggacc ctcttcacctgtgaggttgagatgctgctgcatgtcgtttccactgcagatgtgattcag cactgccagcgggtcaaacccatcatcgacctggtccataaggtcatcagcacagacctg tcgatagcggactgcctcctgcccatcacgtcccgtgtctacatgctgctgcaacggtta acgacagttatctccccgcctgtggatgtcattgcttcttgcgtcaattgcttgactgtt ttggcggcccggaacccagcaaaggtctggactgatcttcttcacacaggcttcttgcct ttcgtggcccaccaggtctccaacatgagtcagatgatcagtgctgaggggatgaatgct ggtgggtatggaaacctcttgatgaatagtgaacagccccagggcgagtatggggtcact gttgcctttctgcgcttgatcaccactcttgtcaaggggcagcttggtagtacccagaac caagggctggtgccttgtgtcatgtttgtgctgaaggagatgctgccaagttaccacaag tggcgctacaactcccatggtgtgagggagcagattggttgcctgatcctggagctgatt cattcaatactgaacctgtgccatgagacagacctgcacagcagtcacacccccagcctg cagtctctctgcatctgcagcctggcctacacggaagcaggacagacagtaatcaatatc atgggcatcggcgtcgacactatcgacatggtcatggctgctcagccccgcagcgatggg gcagagggccagggccagggccagctgctgattaagacagtgaaactggcattctccgtc accaacaatgtcattcggctgaaaccgccttctaatgtggtgtcccctctggaacaggct ctcacacagcatggtgcccatgggaacaaccttattgctgttcttgccaaatacatctac cacaaacacgacccagctctgcctcgtcttgccatccagctgctaaaacgtctggccacg gtggcccccatgtcagtgtatgcctgcctgggcagtgatgcagctgccatccgagacgcc ttcctgacccgactgcagagcaagattgaggatatgcgcatcaaagtcatgattctggaa ttcctcacggttgctgtagagacgcagccaggcctcattgaactgtttctgaatctggag gtgaaggatggcagcgatggctccaaggaattcagccttggggtgtggagctgtctccac gcagtactggagctgatcggttcccagcagcaggaccgctactggtgccccccactgctg caccgggcggccattgcctttttgcacgccctgtggcaggaccggcgggacagtgccatg ctggtcctcagaaccaaacccaagttttgggagaatctaacgagtccgctatttggtacg ctttctcctccctcggaaacatccgagcccagcatcctggaaacctgtgccctaatcatg aagataatttgcttggagatatactatgtagttaagggctcattagaccagtcattaaaa gatacactcaagaaattttccagcgagaagcgctttgcctactggtcggggtatgtcaag tccttggcggttcacatggccgacacagagggcagcagctgcacctccctggtagagtat cagatgctggtctccgcctggaggatgtttctcatcattgccaccagtcatgcggagata acgcacctgacggactctgcagtgcgtcgccagctctttcttgacgtgctcgaggggacc aaggcgttactcctcgtccccgcctccgtgaactgcctccgcctcggctccatgacgtgc accctgctgcttattctcctccggcagtggaaaagagagttagggtctgtggatgaaatc ctcgggcccctgacggagatcctggagggagtgctgcaggcagaccagcagctaatggag aagaccaaggccaaggtgttctcggcgttcatcacggtgctgcagatgaaggagatgaga gtgaatgacatcccccagtactcccagctggtgctgaacgtctgtgagacccttcaggaa gaggtgatcgcacttttcgaccagacccgccacagcctggcggcgggcagtgccaccgag gacaaggacagcatggagactgatgactgctcccggctccggcacaaggaccagcgggat ggggtctgtgtcctgggcctgcacctggccaaggagctgtgtgaggtggatgaggacggg gactcgtggctgcaggtgacccgccggctccccatcctgccgaccctcttcaccaccttg gaggtgagccttcgcatgaagcagaacctgcacttcaccgaggcggcgctgcacctgctc ctcacgctggcccgcacccagcagggggccatggctgtggccggagccggcatcacccag agcatttgtttgcctctcctgagtgtgtaccagctcagtaccaacgggacagtgcagacg cccggcacctctcggaagtccctggacgccccctcttggcccggcgtctaccgtctctcc atgtccttgatggagcggctcctcaaaaccctgcgctacaacttcctgaccgaggccctg gacttcgtgggggttcaccaggagcggaccttacagtgcctcaacgcagtgaggacggtg cagagtctggcgtgcctggaggaggccgaccacaccgtgggcttcctcctgcagctctcc agcttcaggaaggagtggcatttccacctgcctcagctcatgcgggatgtccaggtgaac ctcggctacctgtgccaggcctgcacctccctcctgcacagccgcaaggtgctgcagcac tacctgcagaacaaaaatggggagggcatcccctcagccgtcaccccccgagctcagcgg ccacccgcagctgccccggctgcctcctcctgctcctcctccaagcagcccactcctgac acggaggcctcggagcagcgggccttgcgcaccgtccagtatggcctcctgaggatcctc agcaggaccctggccgccctgcgccgcttcacccccgacgtctgccaggtcctgctggat cagtccctggaccttgctgagtacagcttcctgtttgccctgagcttcaccactcccact tttgactccgaaggggccccctccttcgggacccttctggccaccgtgaatgtggccctg aacatgcttggagagctggacaagaagaaggagcctctcacccaggctgtggggctcagc acacaagcggaagggaccagaactctgaagtcgctcctgatgttcaccatggagaactgc ttctacctgctcatctcccaggcgatgcgttaccttcgggacccggctgtgcacccccgg gacaagcagcggatgaagcaggagctcagctcagagttgagcactctcctctccagcctc tcccgctacttccgccggggagcccccagctcccctgctgctggcgtccttccctcgcct cagggcaagtccacctctctctccaaggtcagccccgagagtcaggagcctcttatccag ctggtgcaggcctttgtccgacacatgcaaagatag

DBGET integrated database retrieval system