Oryx dammah (scimitar-horned oryx): 120852316 Help Entry 120852316         CDS       T07255                                  Symbol SETX Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism oda  Oryx dammah (scimitar-horned oryx) Pathway oda05014   Amyotrophic lateral sclerosis Brite KEGG Orthology (KO) [BR:oda00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     120852316 (SETX)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:oda03021]     120852316 (SETX) Enzymes [BR:oda01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      120852316 (SETX)     5.6.2.5  RNA 5'-3' helicase      120852316 (SETX) Transcription machinery [BR:oda03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      120852316 (SETX) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_12 AAA_11 AAA_19 AAA_30 SLFN-g3_helicase ResIII nSTAND3 AAA_16 AAA_22 UvrD_C_2 Motif Other DBs NCBI-GeneID:  120852316 NCBI-ProteinID:  XP_040081667 LinkDB All DBs Position Unknown AA seq 2544 aa AA seqDB search MSTCCWCTPGGTSTTDFLQRYASKTRSSEFQTADEDLCYCLECVAEYHKARDELPFLHEV LWELETLRLINHFERSMKAEIGDDDELYIVDNNGEAQLFDFTGQDFENKLRVPLLEILKY PYLLLHEHVSELCVEALCRMEQANCSFQVFDKHPGIYLFLVHPNEMVRRWAILTARNLGK VDRDDYYDLQEVLTCLFKVIELGLLENPDIYTSSVLEKGKLVLLPSHMYDTANYKNYWLG ICMLLTILEEQAMDSLLLGSDKQNDFMQSILHTMERQSNDDSMDPFWPALHCFMVILDRL GSKVWGQLIDPIEAFQTIINNVSYNREIQNIRNSSMRTKLEPESYLDDMVTCSQIVYNYN PEKTKKDSGWRSAICPDYCPNMYEEMETLANVLQSDIGQDMRVHNSTFLWFIPFVQSLMD LKDLGVAYIVEVIHHLYSEVKDVLNQTDAVCDKVTEFFLLILVSVIELHRNKKCLHLLWV SSQQWVEAVVKCAKLPTTAFARSSEKSSGNCSKGTAMISSLSLHSMPSNSVQLACVQLIR SLLKEGYQLGQQTLCKRFRDKLNLFLRGNLSLGWQLTSQETHELQTCLKQIIRNIKFKVP QCSTSVDLNPACKTPPASFKEESEQIGKKSEKDVHCLENSSPTSSKEPMKADAYQVQESV LSKANNAIEESKEPYYIKDLKLEGHLSAESCLKLSSKNLACERVQNQVKISTGKYNSVKE NSSCTPQNGTLRNGSEKVFDRGIIISRRLLTVSSTDSMEKVSASNEDFSLKGDGLGKSSK AKSKTRKDGVSAKLSHVIKKQRRRSISLEENLTVSSIESFYSKKDIGGQKGGGNICNPSL VPNGILDDKNGEQKSQSCLLLRKKEVKKEKLDIFSTPENSCQIQECHVDTKDLVSLTERT NTFMTKASPFKEPVTGHELRDRKISRSTDQFSSNLREQDLSSSPQSDTLTDSQVDRDLHK LSLIAQASVTKFPSDSTQKSLSQIQRKVKDEKRCFTANQNIRETCRGQVIIISDSDDEEE GERILGLKKQTKEIKACIEKECPEQHTSIANTNVEQKVLIKEENPMSLLQFEESDSQFFE FETPCEVFSVWHDQKPDENSAQENEKNPGSTHVGDTANDLGYETDYVSEEVIKKVAENFE ERTKPRSSSTSVEEFCEIEVKKPKRRRYEKPVAEDPLRPPSSSVKNEDQSGIPNKGNLSK NDSKGVDPRSTVPSSSVQRNAAVSPKKSLPKPRTYSRPVRKVQVVKASKKSHSDTKKGQS KSSHYISCRTTPAIVPPKKFRQCPEPTSTVEKLGLKKAPRRAFELSQPSLECLGQLRDHG RTVGVVDTRKKTKLISPQTLSVRNNKKLLTSQDLQLHRQMRSKSQHNRQGRFDCRSTDKT RAGPRAAQSSAVPESSKSDYSHHGGAEVTANNKGKQSLTCQSSETEPVEANQCDPVVVNG RVAATEVVGPTSEDLLGRGDLAVHHLEVATLKEGEPEFSSDIEEEDIFLTQRDPEDMDLC SQIERENDKLIEVIHGKDTVQGEEECVRQPQLESLSSTKCKYKDCVETLKNPGEYCSKHS KTKATDEDVFRKPGLPLSASKRSRPTTKVFSSSSTSRIAGLSKSLESSTSLPSSLKNKST GAQSVLRGPQPPPMVSLKPVAEVKGLCSVFPAQTPNNSNRQVLRVPFGESRSFLISSPVN ILTSSQSISDTFVKEVLKWRYEMFVNFDQCGPPSSLCQSIARRVPIRFQDCGDYFNVFFP LMVLNTFETVAQEWISSPNKEKFHQLHLRKFPGDYKKYWEFVVYLEESELAKQLHPREND VVFLVPERLNEEKKDLEWSHLEDACEYYCGYVHKFRRTSVMHNGKSECSVSIQTQDNLPV NLNELVKCFVISSLVTTQRKLKAMSLLSGRNQLARAILNPNPMDFCTKDLLTTTSERIVA YLKDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGILYRLLTEQSNFFQ RQELDGKIARVSKERQELASKIKEVQGRPQKTQSIIILESHIICCTLSTSGGLLLEAAFR GQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQS MMARFHKLLEESVEHNTIGRLPVLQLTIQYRMHPDICLFPSSYIYDGALKTNRGIETSRC SSDWPFQPYLVFDVGDGLERRDNDSYVNVQEIKLVMELIKLIKDKKRDINFRNIGIITHY KAQKTMIQKDLDKEFDRKGAAEVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASLQRL NVTITRAKYSLFILGHLRTLVENRHWYHLIQDAQKRGAIIKTCDKNYRHDAMKILKLKPL LQRSLTHPPAVAPEASRPQGGLPSSKQDGELSKTSFASSLYHSPSDSKEATVTEAAKDPE RPPIQDWLRDPRLLRRMGLAFDAQGISLREPQPLSPQHSGAAPPSGAPGCPGSPQEPCTV GQQGVTLNNHTPHMQCDSPAAGSDTSTSRKKGDQEEGVLGHRRETRALSEGDQEWWASSH TKRNSDWDERGLEEDSHSKKRRVL NT seq 7635 nt NT seq  +upstreamnt  +downstreamnt atgagtacatgttgttggtgtaccccagggggtacttccaccactgacttcctgcaacgc tatgcatccaagacccgctccagtgaatttcagacagctgatgaagacctctgctactgc ttggagtgtgtggctgaataccacaaagcaagggatgaattgccattcttacatgaggtt ttatgggaattagaaaccttacgtctcataaatcactttgaaagatccatgaaggcagaa attggagatgatgatgagttatatatagtagacaacaacggagaggcacagctgttcgac ttcactggccaagactttgaaaataagcttcgagttcctcttcttgaaatactgaaatat ccatatctgcttttacatgagcatgtcagtgaattatgtgttgaagcactttgccggatg gaacaagctaattgctcctttcaagtttttgacaaacatccagggatctatttatttttg gttcatcccaatgaaatggttcggcgttgggctatcctgactgcaagaaacttggggaaa gtggatagagatgattactatgacttacaggaggttttgacttgcctttttaaagttatt gagttgggacttttagaaaacccagacatttatacttcttctgtccttgagaagggtaaa ttggttcttctgccttcacacatgtatgatactgccaactacaaaaactattggttaggt atttgcatgctgctcaccattcttgaggagcaagccatggattcactgttgttgggctca gataaacagaatgattttatgcagtcaatacttcataccatggagaggcaatcaaatgat gatagtatggatcctttctggccagcgttacactgtttcatggtgattctggatcgcctt ggatctaaggtctggggtcaacttattgatcctattgaagcatttcaaaccattattaac aacgtgagctacaatagagagatccagaacatacggaacagctctatgaggaccaagtta gaaccggagtcgtatttggatgatatggtgacttgcagccagattgtatacaattataat cctgaaaagaccaaaaaggattcggggtggagatcagccatttgccccgattattgtcct aacatgtatgaagaaatggaaacattagctaacgtgctccagtcagatattggtcaggac atgcgtgttcataacagcacatttctgtggttcatccctttcgtgcaatccctcatggac ctgaaggatctgggtgtggcttacatagtggaggttattcaccatctgtactctgaagtc aaagatgttctcaaccagacagacgctgtgtgtgacaaagtcactgagtttttccttctg attttggtgtccgtgattgaactgcatagaaataaaaaatgtctacatttgctgtgggtt agttcccagcagtgggtggaggctgtggtgaagtgtgccaagctaccgaccacagcgttt gcacggagttccgagaagtcatctggaaactgttccaaaggcacagcaatgatatcatcc ctgtcattgcattcaatgccctccaactctgtgcagctggcttgtgtgcagctgattaga agtctcctgaaagaaggctatcagcttgggcagcagactctctgtaaacgattccgggat aaactcaacttattcctgcgagggaatttatctttaggttggcagttgactagtcaggaa acccatgaactacaaacttgtttaaagcaaattattaggaacataaaattcaaagtacct cagtgtagcacttctgtggatctgaatcctgcatgtaagacgcctcctgcatcttttaaa gaagaaagtgaacaaatagggaagaaatctgaaaaagatgtgcattgtctggaaaattcc agcccaacatcttctaaagaaccaatgaaagctgatgcatatcaagtgcaagagagtgtt ttgagcaaagcaaataatgccatagaagagagtaaagagccatattatataaaagatttg aaactagaaggtcacctctcagctgagtcatgtttgaagctgagtagtaaaaaccttgcc tgtgaaagagttcaaaatcaagttaaaataagtacagggaaatataactctgtaaaagag aattcctcatgtaccccacagaatggtactttaagaaatggttcagaaaaagtatttgac agaggaataataatatcaaggcgcttattgactgtttctagcacggattctatggaaaaa gtgtctgcctccaatgaggacttctctttaaagggtgatggtcttggcaaaagctcaaaa gcaaaatctaagacacgtaaagatggagtctctgctaagttgtcacatgtaataaaaaag caacgaaggagaagtatcagtttagaggaaaacctgactgtatctagcattgagagtttc tattcaaagaaagatataggaggtcagaaaggaggtggaaacatatgcaatccttcttta gtccctaatggtattctggatgataaaaatggagaacaaaaatctcaaagctgtttattg ctgaggaagaaagaagtaaagaaagaaaagttagatattttctctacccctgaaaacagt tgtcaaatacaggaatgtcatgttgataccaaagatttggtctcactcacagaaaggacc aatacgttcatgacaaaagcatctccctttaaagagcctgtgactggacatgaattgaga gataggaaaatcagtaggagcactgatcagttttcttctaatttaagagaacaggacctt agcagcagtccccagtctgacaccttaacagattctcaggtagatagagacctccacaaa ttatctttaatagctcaagccagtgttactaagttcccatcagattcaactcaaaaaagt ttatcccaaatacaaagaaaagtaaaagatgagaaaagatgtttcacagcaaaccaaaat atcagggaaacctgccgtggacaggttattattatttcagattccgatgatgaggaggag ggggaaagaatcctgggtttgaagaaacaaacaaaagagatcaaagcatgcattgagaaa gaatgtccagagcaacatacttcaatagctaacacaaatgtggaacagaaggtattaata aaggaagaaaatccaatgtcccttttgcagtttgaggaatctgattctcagttttttgag tttgagactccgtgtgaagtgttttcagtttggcatgatcagaaaccagacgagaattca gctcaagagaatgagaaaaatccaggctcgactcatgtgggtgatactgcaaatgatttg ggttatgagacagattatgtatctgaagaggtcattaaaaaagtagcagagaactttgaa gagcgcacaaaaccacgtagtagtagtacttctgttgaggaattttgtgaaattgaagta aaaaaacccaagagaagacggtatgaaaaacctgtagctgaagatcctctaaggccgcct tcatcttctgtcaaaaatgaggaccagtctggtattcctaacaagggaaatctgagtaaa aatgattctaaaggtgtagacccaagatctacagttcccagttcaagtgttcagagaaac gctgcggtttccccaaagaagtctcttccaaagcctcgcacgtattccagacctgtcagg aaagttcaagtggttaaagcttctaagaaatcccattcagataccaagaaaggacagagt aaaagttcccattacataagctgtagaacaactcctgctattgtgccgccaaagaaattt cgccagtgtcccgaaccaacttcaacggttgagaaacttggcctgaaaaaggctcctcgt agggcgtttgaattgtcccagccatctttagagtgtctaggtcagctacgtgaccatggc agaactgttggagtagtggatacccggaaaaagacgaaattaatttctcctcagacgctc tctgtcagaaataataagaaactgctgacgagtcaagaccttcagttgcataggcagatg agatccaaatcacagcacaacagacaaggacgttttgattgtcgaagtacagataagaca cgagcagggccacgtgctgcacagagctctgctgtgccagaatcaagtaagtcggattac agtcatcacggaggagccgaggtgactgctaacaataagggaaaacagtcactaacgtgt cagtcttctgaaacagagcctgtggaagcaaaccagtgtgatcctgtcgtggtgaatgga agagtagcagcgactgaagtcgtcggtcctacctcagaggacctgttaggcagaggtgac ctagcagttcatcatttagaggtggcgactttgaaagagggagagcctgagttcagcagt gacatagaggaggaggatatattcttaacacagcgtgaccctgaagacatggatttatgt tcacaaatcgagagagagaatgataaactcattgaagtcattcatggaaaagatacagtg cagggagaggaagagtgtgtgaggcagcctcagttggaatctttgagtagcacaaaatgt aagtacaaagattgtgttgaaactctgaaaaacccgggtgaatactgctcaaaacactca aagactaaagccacagatgaagatgtatttcgtaaacctggcttgcctctgtctgcatca aaacgttcgagacccacgaccaaggtttttagttcaagcagtacttcacggattgctggt ctctccaagtctttggaaagtagcacatccctcccatcatctctgaaaaataagtcaact ggggcacagtctgttctgagaggaccacagccaccccctatggtgtctctgaagccagtg gctgaagtgaaaggtctgtgcagtgttttccctgctcagactccaaataactccaacagg caagttttgagagttccatttggggaaagcagatcttttttgatttcctctccagtaaac attctcacatcgtcacagtccatctctgatacctttgtaaaagaggtcttgaaatggaga tacgagatgtttgtgaactttgatcagtgtgggcccccatcgagtctgtgtcagtccatc gcaagacgggtgcctatcaggtttcaagactgtggagattattttaatgtgtttttccct ttgatggtactgaatacttttgaaacagtagcacaggaatggatcagctctccaaacaaa gagaaattccatcagttgcatttacgaaaatttcctggtgattataaaaaatactgggag tttgtggtttatcttgaggaaagtgaactagctaaacagcttcatccaagggaaaatgat gtggtgtttttggttcctgaaagactcaatgaggagaagaaagatttagagtggagtcac ctggaggatgcctgtgaatattactgtggctatgttcataaattccgccgtacttcagtc atgcataatgggaaatctgagtgttcggtttccatccagactcaagataatttaccagtc aatttaaatgaactcgtgaaatgctttgtaatcagctctctggtgactacacaaaggaag ttgaaagccatgtctttgctgagtggtcggaaccaactggccagagccattctgaatcca aaccccatggacttctgtacaaaagatttactaactacaacatctgagagaattgttgcc tacttaaaagatttcaatgaagaccagaagaaagcaatagaaactgcatatgccatggta aaacactccccatcagttgccaagatctgtctgattcatggaccacctggaacaggaaaa tcaaaaaccattgttggcatcctgtaccgcctgctgactgagcagtctaattttttccag aggcaagaattagatggaaaaattgccagagtttcaaaagaaaggcaggaacttgcttct aaaattaaagaggttcaagggcgcccacagaagacacagagcatcatcatcttagagtcg cacatcatttgctgcacgctgagcacgagcggtggcttgctgctcgaggctgctttccgt gggcaaggaggcgtccccttcagctgtgtcatcgttgatgaggctggacagtcctgtgaa gttgaaactcttactccgctcatccatcgttgcaacaagcttgtcctcgtaggagaccct aagcagctccctcccacagtcatttccgtgaaggcacaggactatggctatgaccagtca atgatggcccgcttccacaagctcctggaggagagtgtggagcacaacacgattggcagg ctgcccgtcctacagctcaccatccagtacaggatgcacccggacatatgcctctttcct tctagttacatttatgacggagccttgaaaacaaatagagggatagagaccagtcggtgc tcatctgactggccatttcaaccctacctcgtgtttgatgttggagacggcttagaaaga cgggataatgactcatatgtaaatgttcaagagataaaactggtaatggaactaattaaa cttattaaagacaaaaaaagggacattaatttccgaaacattggcataataacccattac aaggctcagaagacgatgattcagaaggatttggacaaagagtttgatagaaaaggggca gcagaagtagataccgtggatgccttccagggtcgtcagaaagactgtgttattgttaca tgcgtcagagcaaatgccacacaaggctcaattggatttctggcaagtttgcagagattg aatgtcaccatcacacgagccaagtacagcctcttcatcctgggacacttgagaacccta gtggaaaataggcattggtatcacctgattcaagatgcacagaaacgcggcgccattatt aagacttgcgacaagaactacagacacgatgcaatgaagatcctgaagctcaagccattg cttcagaggagccttactcaccctcctgctgtcgctccagaggcatccagaccccagggt ggcctacccagcagcaagcaagatggtgaactcagcaagacatcctttgcttcttccctg taccactcaccctctgattccaaagaagccacagtcaccgaggctgcaaaggatcctgaa aggccacccattcaggactggcttcgggacccaagactgctgcggaggatgggcttagcc tttgatgcccaaggaataagcctcagggagccgcagcccttgagcccccagcattccgga gcagcgcctccttcaggcgcgccaggctgccctgggagtccccaggagccatgcaccgtc gggcagcagggagtcaccctgaacaaccacacgcctcacatgcagtgcgactctccagct gctggtagtgacacttccacaagcagaaagaagggtgaccaggaagagggggtgctcggt cacaggagagagaccagggccttgagtgaaggggatcaggagtggtgggcgagctcccac acaaagaggaactcagactgggatgagaggggcctggaggaggacagccactcaaagaag agacgggttttatag

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