Oryx dammah (scimitar-horned oryx): 120853518
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Entry
120853518 CDS
T07255
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120853518
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oda04990
]
120853518
Domain-containing proteins not elsewhere classified [BR:
oda04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
120853518
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
TSP1_CCN
ADAMTS_CR_3
TSP1_spondin
PLAC
Motif
Other DBs
NCBI-GeneID:
120853518
NCBI-ProteinID:
XP_040083360
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MVSCFMESFSVLGSLLLLGLQLVCPQPSTEHRKVPQRMAVAEGAPEDGGGGAPGVWGSWG
PWSACSRSCSGGVMEQTRPCLPSSYRARGGPRPGAPARAFTGHVVSAVRTSVPLHRSREE
TRAPAGLNSSRQGPALRGSRHPQARGREPTAERRSRTRGPIGPGKYGYGKAPYILPLQTD
SAQPPQRLRRQKPSSRNSRSQGASGSSHGYHPSAHQPPQHGPLYQSDSGPRSGLQASEGS
VYQLPLTHDQGFPAASSLFHSPEASSSPGLGAPRAAQSFSQPTRSTAISCIGAYRQYKLC
NTNVCPESSRSIWEVQCASYNNKPFMGRFYEWEPFAEVKGNRKCELNCQAMGYRFYVRQA
EKVIDGTPCDQNGTAICVSGQCKSIGCDDYLGSDKVVDKCGVCGGDNTGCQVVSGVFKHA
LTSLGYHRVVEIPQGATKINITEMYKSNNYLALRSRSGRSIINGNWAIDRPGKYEGGGTM
FTYKRPNEISSTAGESFLAEGPTNEILDVYMIHQQPNPGVHYEYIIMGNNAISPQVPPHR
RPGEPFNGQLVPEGRSQQEGKEKEGDQEKADTRSGTPEMFTLESAQTFPVRQPDRFSLHR
PDSVVPPAPQPPRQSRDHNWKQLGTTECSTTCGKGSQYPIFRCVHRNTHEEVPESYCDLA
MKPTPEEEPCNIFPCPAFWDIGEWSECSKTCGLGMQHRQVLCRQVYANRSLTVQPYRCQH
LEKPETTSTCQLKICSEWQIRTDWTSCSVPCGVGQRTRDVKCVSNIGDVVDDEECNMKLR
PNDIENCDMGPCAKSWFLTEWSERCSAECGAGVRTRSVVCMTNHVSSLPLEGCGSNRPAE
ATPCDNGPCTGKVEWFAGSWSQCSIECGSGTQQREVICVRKNTDTFEVLDPYECSFLEKP
PSQQPCHLKPCGAKWFHTEWSMCSKSCQGGFRVREVRCLADDMTLSNLCDPQLKPEEKES
CNPQDCVPEVDENCKDRYYNCNVVVQARLCVYNYYKTACCASCTRVANRHSGFPGSR
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggtttcctgtttcatggagtccttcagtgtcctgggttccctcctgctgcttggactc
cagctcgtctgcccgcagccctccacggaacacagaaaggtcccgcagcggatggctgtg
gccgagggtgcccccgaggatggcggtggcggcgccccgggcgtgtggggctcctggggc
ccctggtccgcctgctcgcgcagctgcagcggcggcgtgatggagcagacgcggccttgc
ctgcccagctcgtaccgcgcacgcgggggaccaaggcccggagcccccgcgcgcgccttc
acgggccacgtggtgtcagccgttcgcacatcggtgccgctgcaccggagccgcgaggag
acacgcgcccctgccggcctcaactccagtcgccagggcccggcgctgcgaggcagccga
cacccgcaggcccggggccgcgaacccacggcggagagaaggagcaggacccgaggtccc
atcggccctggcaagtatggttatgggaaagccccgtacatcttaccattgcagacagac
tctgcacagccaccccagaggcttcggcggcagaagccctcatcccggaattccaggtcc
cagggggcatctggctctagccatggctaccacccttcagctcaccagcccccccagcat
ggacctctgtaccagagtgacagtggcccgcgttctggactgcaagcctcagagggctct
gtctaccagctgcctttgacccatgaccaaggcttccctgcagcctccagtctcttccac
agcccagaagcaagcagcagccctgggctgggggcccccagggcagctcagagcttctcg
cagcccaccagatctacagccatctcctgcatcggggcctaccggcagtacaagctgtgc
aacacgaatgtgtgtccagaaagcagtagaagtatctgggaggtacagtgtgcatcctac
aacaacaagccgttcatgggccggttttatgaatgggaaccatttgcagaagtcaagggc
aatcggaagtgtgagctgaactgccaggcaatgggctaccggttctatgttcggcaagct
gagaaggtcattgatggtaccccctgtgaccagaatgggacggccatctgcgtgtccggg
cagtgcaagagcattggctgtgatgactacctaggctcggacaaagttgtggacaaatgc
ggggtgtgcggaggcgataacacaggctgccaggttgtgtcgggtgtgtttaagcatgcg
ctcaccagcctgggctaccaccgagttgtggagattccccaaggagccacaaaaatcaac
atcaccgagatgtacaagagcaacaactatttggccttgcgaagtcgttctggccgctcc
atcatcaatgggaactgggcaattgaccggcctggaaaatatgagggcggagggaccatg
ttcacatacaagcgtccaaatgagatttcgagcactgctggagagtcctttttggccgaa
ggtcccactaatgagatcttggatgtctatatgatacaccagcagcctaacccaggagtc
cactacgagtacattataatggggaacaacgccatcagcccacaggtgccacctcacagg
agaccaggggagcccttcaatggccagctggtaccagaagggaggagccagcaggaggga
aaagagaaagagggggaccaggagaaggcagacacgcgcagcgggacacctgaaatgttc
acattggaatcagcacagaccttcccggtcaggcagccagacagattctctctccaccgg
ccggacagtgtggtgccaccagctccgcagccccctcggcagagccgggatcacaactgg
aagcagctggggaccacagagtgctcgacaacctgcgggaaaggatcacagtaccctatt
tttcgctgtgtgcacagaaacactcacgaagaggttcctgagagctactgtgacttggcc
atgaagccgacccccgaggaggagccctgcaacatcttcccttgcccagccttctgggac
atcggggagtggtccgagtgcagcaagacctgcggcctgggcatgcagcaccgccaggtc
ctgtgtcgccaggtgtacgccaaccgcagcctgacggtgcagccctaccgctgccagcac
ctggagaagcccgagaccaccagcacctgccagctcaagatctgcagcgagtggcagatc
cggaccgactggacctcgtgttcggtgccttgtggagtgggacagaggacccgggacgtg
aagtgtgtgagcaacatcggggacgtggtcgacgacgaggaatgcaacatgaagctccgg
cccaatgacattgagaactgcgacatgggaccctgtgccaaaagctggttcctgactgag
tggagcgagcggtgctcagcggagtgcggggctggagtgcggacacgctcagtggtgtgc
atgaccaaccacgtcagcagcctgcccctggagggctgcgggagcaaccggccagcggag
gctaccccatgtgacaatgggccctgcacaggcaaggtggagtggtttgcaggaagctgg
agtcagtgttccatcgagtgtgggagtgggacccagcagagggaggtgatctgtgttagg
aagaacacagacacctttgaagtgctggacccctatgaatgttcctttctggagaaaccc
cccagccagcaaccctgccacctcaagccctgcggggccaaatggtttcacacagaatgg
agcatgtgttccaagagctgtcagggcggcttccgcgtccgggaagtgcgttgtctggca
gatgacatgaccctaagtaatctctgtgaccctcagttgaaaccagaagaaaaagaatct
tgtaaccctcaggactgtgtccctgaagttgatgaaaactgcaaggaccggtactacaac
tgcaatgtggtggtccaggccaggctctgcgtctacaactactacaagacggcttgctgc
gcctcctgcacgcgcgtggccaacaggcactcgggcttcccagggagcagataa
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