KEGG   Oryx dammah (scimitar-horned oryx): 120853540
Entry
120853540         CDS       T07255                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
oda  Oryx dammah (scimitar-horned oryx)
Pathway
oda03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:oda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    120853540 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oda03400]
    120853540 (TDP1)
DNA repair and recombination proteins [BR:oda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     120853540 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 120853540
NCBI-ProteinID: XP_040083411
LinkDB
Position
Unknown
AA seq 611 aa
MSQEGSYGKWTISSSDESEEEKPQLDKPPASPLPDAGQGAAGQPRYTCSEARKAAHRRKL
EPMKFSSTDSASEASPCKRQKSGSQEDLGWCLSSSEDELPRERQQEQAEDSRVKEEKGPP
SPRDRSARGAGPHGRPASCGLPEEEGEQEVSGEGQDVWDLLDKGNPFQFYLTRVSGIKPK
YNTGALHIKDILSPLFGTLVSSAQFNYCFDVNWLVRQYPPEFRKKPVLLVHGDKREAKAH
LLAEAKPYGNVTLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIREDWHQKTQGIW
LSPLYPRIVHGTHRSGESATHFKADLISYLAAYDAAPLKEWIDTIQEHDLSETNVYLIAS
TPGRFQGNQKDNWGHFRLRKLLKEHAAPIPKAESWPVIGQFSSIGSLGADESKWLCSEFK
ETLVTLGKESRTLGSAVPLHLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYFH
KWSADTSGRTNAMPHIKTYLRSSPDFSQIAWFLVTSANLSKAAWGALEKGGTQLMIRSYE
LGVLFLPSVFDLDSFKVKQKFFSGSSQEPTASFPVPYDLPPELYGNRDRPWIWNIPYVKA
PDTHGNMWVPS
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgtcccaggaaggcagttatgggaagtggacgatatccagtagtgatgaaagtgaggag
gagaagccgcagctggacaagccacctgcctctcccctccccgacgccgggcagggggct
gccgggcagccgaggtacacctgctccgaggctcggaaagccgcccacaggaggaagctg
gagcccatgaaattcagcagcacagactcagcttcagaagcttcaccttgcaaaagacag
aagagcgggtcccaggaggacctgggctggtgtctgtccagcagtgaggacgagctgcct
cgagagcggcagcaggagcaggcagaggactcgcgggtcaaagaggagaaaggcccccct
tctcccagggaccgctcggctcggggagctgggcctcacggccgccccgccagctgtggg
cttccggaggaggagggtgagcaggaagtgtcaggggaaggccaggacgtctgggacttg
ctggataaagggaaccccttccagttctacctcacgagagtctccgggattaagcccaag
tataacacgggagccctccacatcaaggatattttatctcctctctttgggacacttgtt
tcttcagctcagtttaactactgctttgatgtgaactggctcgtgagacagtatccacca
gagttcaggaagaaaccagtcctgcttgtgcatggcgacaaacgggaagcaaaggctcac
ctcctggccgaggcgaagccttacgggaatgtcaccctctgccaggcaaagttggatatt
gcatttggaacacaccacacgaaaatgatgcttctgctgtacgaggaaggcctccgggtt
gtcatacacacctccaacctcatccgcgaggactggcaccagaaaacacagggaatatgg
ttgagccccttgtacccccgaatcgtccacgggacccacagatctggagagtcggccaca
cacttcaaagctgacctcatcagctacctggcagcttatgacgccgcccctctcaaggag
tggatagacaccatccaggagcacgacctctcagaaacaaatgtttaccttattgcctca
accccgggacgctttcaaggaaatcagaaagataattggggacatttcaggcttaggaag
cttctgaaagagcacgccgcacccatccctaaagcagaatcttggccggtcataggtcag
ttctccagcattggctccttgggggcagatgaatcaaaatggttgtgttctgagtttaaa
gagaccctggtgaccctgggcaaggagagcaggaccctaggaagtgctgttcctctccat
ctgatctatccttcagtggaaaatgtacggaccagcttagaaggatatccagctgggggc
tctcttccctatagcatccagacggcagagaaacagaattggcttcattcctattttcac
aagtggtcagctgacacgtcaggccgcaccaacgccatgccacatattaagacttacctg
agatcctctccagacttcagtcagatcgcttggttccttgtcacgagcgccaacctgtcc
aaggccgcctggggcgcgctggagaagggcggcacccagctaatgatccgctcctacgag
ctcggcgtcctctttctgccctcagtgtttgacctggacagtttcaaagtgaaacagaaa
ttcttctccgggagcagccaggagcccacagcctccttccctgtgccgtacgacctgcct
ccagaactgtacggaaacagagatcgaccatggatttggaacatcccttatgtcaaagca
cctgatacacacgggaacatgtgggttccctcctga

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