Oryx dammah (scimitar-horned oryx): 120854519
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Entry
120854519 CDS
T07255
Symbol
FN1
Name
(RefSeq) fibronectin isoform X1
KO
K05717
fibronectin 1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04151
PI3K-Akt signaling pathway
oda04510
Focal adhesion
oda04512
ECM-receptor interaction
oda04810
Regulation of actin cytoskeleton
oda04820
Cytoskeleton in muscle cells
oda04933
AGE-RAGE signaling pathway in diabetic complications
oda05100
Bacterial invasion of epithelial cells
oda05135
Yersinia infection
oda05146
Amoebiasis
oda05165
Human papillomavirus infection
oda05200
Pathways in cancer
oda05205
Proteoglycans in cancer
oda05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
120854519 (FN1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120854519 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120854519 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120854519 (FN1)
04810 Regulation of actin cytoskeleton
120854519 (FN1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
120854519 (FN1)
05205 Proteoglycans in cancer
120854519 (FN1)
09162 Cancer: specific types
05222 Small cell lung cancer
120854519 (FN1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
120854519 (FN1)
09171 Infectious disease: bacterial
05135 Yersinia infection
120854519 (FN1)
05100 Bacterial invasion of epithelial cells
120854519 (FN1)
09174 Infectious disease: parasitic
05146 Amoebiasis
120854519 (FN1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
120854519 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oda04131
]
120854519 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oda04147
]
120854519 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
oda00536
]
120854519 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
oda04990
]
120854519 (FN1)
Membrane trafficking [BR:
oda04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
120854519 (FN1)
Exosome [BR:
oda04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
120854519 (FN1)
Glycosaminoglycan binding proteins [BR:
oda00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120854519 (FN1)
Domain-containing proteins not elsewhere classified [BR:
oda04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
120854519 (FN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
fn2
NDNF
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
120854519
NCBI-ProteinID:
XP_040084488
LinkDB
All DBs
Position
Unknown
AA seq
2478 aa
AA seq
DB search
MLGGPGPGLLLLLAVLSLGTAVPSAGASKSRRQAQQIVQPQSPLTVSQSKPGCYDNGKHY
QINQQWERTYLGSALICTCYGGSRGFNCESKPEPEETCFDKYTGNTYRVGDTYERPKDSM
IWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTC
KPIAEKCFDQAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTRTS
YRIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHTSLQTTSAGSGSFTDIRPAIYQPQPH
PQPPPYGHCVTDSGVVYSVGMQWLKTQGNKQMLCTCLGNGVSCQETAITQTYGGNSNGEP
CVLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGNSNGAL
CHFPFLYNNHNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFCPMAAHEEICTTNEGVMYR
IGDQWDKQHDMGHMMRCTCVGNGRGEWTCVAYSQLRDQCIVDGITYNVNDTFHKRHEEGH
MLNCTCFGQGRGRWKCDPVDQCQDSETRTFYQIGDSWEKYLQGVRYQCYCYGRGIGEWAC
QPLQTYPDASGPVQVIITETPSQPNSHPIQWSAPESSHISKYILRWKPKNSPNRWKEATI
PGHLNSYTIKGLRPGVVYEGQLISVQHYGQREVTRFDFTTTSTSPAVTSNTVTGETTPLT
PVVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPD
LLPGRKYTVNVYEISEEGEQNLILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRPRAPIT
GYRIVYSPSVEGSSTELNLPETANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETT
GVPRSDKVPPPRDLQFVEVTDVKITIMWTPPESPVTGYRVDVIPVNLPGEHGQRLPVSRN
TFAEVTGLSPGVTYHFKVFAVNQGRESKPLTAQQATKLDAPTNLQFINETDTTVIVTWTP
PRARIVGYRLTVGLTRGGQPKQYNVGPAASQYPLRNLQPGSEYAVSLVAVKGNQQSPRVT
GVFTTLQPLGSIPPYNTEVTETTIVITWTPAPRIGFKLGVRPSQGGEAPREVTSESGSIV
VSGLTPGVEYVYTISVLRDGQERDAPIVKKVVTPLSPPTNLHLEANPDTGVLTVSWERST
TPDITGYRITTTPTNGQQGYSLEEVVHADQSSCTFENLSPGLEYNVSVYTVKDDKESVPI
SDTIIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSS
VGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNVGPDTMRVTWA
PPSSIELTNLLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYLVSVSSVYEQHESI
PLRGRQKTALDSPSGIDFSDITANSFTVHWIAPRATITGYKIRHHPEHMSGRPREDRVPP
SRNSITLTNLNPGTEYVVSIVALNSKEESQPLVGQQSTVSDVPRDLEVIAATPTSLLISW
DAPAVTVRYYRITYGETGGSSPVQDFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSP
ASSKPVSISYRTEIDKPSQMQVTDVQDNSISVRWLPSSSPVTGYRVTTAPKNGPGPSKTK
TVGPDQTEMTIEGLQPTVEYVVSVYAQNQNGESQPLVQTAVTNIDRPKGLAFTDVDVDSI
KIAWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEEETAELQGLRPGSEYTVSVVALHDD
MESQPLIGTQSTAIPAPTNLKFTQVTPTSLTAQWTAPNVQLTGYRVRVTPKEKTGPMKEI
NLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVITTLENISPPRRARVTDATET
TITISWRTKTETITGFQVDAIPANGQTPIQRTIRPDVRSYTITGLQPGTDYKIHLYTLND
NARSSPVVIDASTAIDAPSNLRFLATTPNSLLVSWQPPRARITGYIIKYEKPGSPPREVV
PRPRPGVTEATITGLEPGTEYTIQVIALKNNQKSEPLIGRKKTDELPQLVTLPHPNLHGP
EILDVPSTVQKTPFITNPGYDTGNGIQLPGTSGQQPSLGQQMIFEEHGFRRTTPPTTATP
VRHRPRPYPPNVNEEIQIGHVPRGDVDHHLYPHAVGLNPNASTGQEALSQTTISWTPFQE
SSEYIISCHPVGIDEEPLQFRVPGTSASATLTGLTRGATYNIIVEAVKDQQRQKVREEVV
TVGNSVDQGLSQPTDDSCFDPYTVSHYAVGEEWERLSDSGFKLSCQCLGFGSGHFRCDSS
KWCHDNGVNYKIGEKWDRQGENGQMMSCTCLGNGKGEFKCDPHEATCYDDGKTYHVGEQW
QKEYLGAICSCTCFGGQRGWRCDNCRRPGAEPGNEGSTAHSYNQYSQRYHQRTNTNVNCP
IECFMPLDVQADTEDSRE
NT seq
7437 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggggtccggggcccgggctgctgctgctgctggccgtcctgtccctggggaca
gcggtaccctccgcgggagcctcgaagagcaggagacaggcgcagcagatcgttcagccc
cagtccccgctgactgtcagtcagagcaaacctggttgttatgacaatggaaagcactat
cagataaaccaacagtgggagcgcacctacctgggcagtgccttgatctgtacctgttac
ggagggagccggggctttaattgtgagagcaagcctgaacctgaagagacttgctttgac
aagtacaccgggaacacttaccgggtgggcgacacttacgagcgccctaaggactccatg
atctgggactgtacctgcatcggggctgggcgagggagaatcagctgcaccattgcaaac
cgctgccatgaagggggccagtcctacaagattggtgacacctggaggagaccacacgag
actggtggttacatgttagagtgtgtgtgtctgggtaatgggaaaggagaatggacctgc
aagcccatagctgagaaatgttttgatcaggctgctggtacttcctatgttgtcggggag
acctgggaaaagccttatcagggctggatgatggtggactgtacttgcctgggagaaggc
agtggacgtatcacttgcacctccagaaacagatgcaacgatcaggacacgaggacatcg
tatagaattggggatacctggagcaagaaggacaaccgggggaacctgctccagtgcatc
tgcacgggcaacggccgcggcgagtggaagtgtgagaggcatacatccctgcagaccaca
tctgcaggatctggctccttcactgatatccgaccggccatctatcagccccagcctcat
cctcagccccctccgtatggtcactgtgtcacagacagcggtgtggtttactctgtgggg
atgcagtggctgaagacacaagggaataagcaaatgctgtgcacttgcctgggcaacgga
gtcagctgccaagagacagctataacccagacttatggtggcaattccaacggagagccc
tgcgtcctcccgttcacctacaatggcaggactttctactcctgcacgaccgaagggcgg
caggatggacacctctggtgcagcacaacttccaattatgagcaagaccagaaatattct
ttctgtacagaccatactgttttggttcagactcgaggtggaaattccaatggtgccttg
tgccactttcccttcctgtacaacaaccacaactacacggactgtacttctgagggcagg
agggacaacatgaaatggtgtggaaccacacagaactatgacgctgaccagaagtttgga
ttctgccccatggctgcccacgaggaaatctgtacaaccaatgaaggggtcatgtatcgc
attggagatcagtgggacaaacagcatgatatgggccacatgatgagatgcacatgtgtt
ggaaatggtcggggagaatggacgtgtgtcgcctactctcagctccgagatcagtgcatc
gtcgatggcatcacttacaatgtgaatgacacattccacaaacgtcacgaagagggacac
atgctgaattgtacctgcttcggtcagggccggggtcggtggaagtgtgatcctgttgat
caatgtcaggattcagaaacccgcaccttttatcaaattggagactcgtgggagaagtat
ttgcagggggtcaggtaccagtgctactgctatggccgtggcattggggagtgggcctgc
cagcccttacagacctatccagatgcaagtggtcctgtccaagtaatcatcactgagacc
ccaagtcaacccaactctcaccccatccaatggagtgccccagaatcatctcacatttcc
aagtacattcttagatggaaacctaaaaattctccaaaccgctggaaggaagctaccatt
cctggccacttaaactcctacaccatcaagggcctgaggccaggtgtggtatacgagggc
cagcttatcagcgtccagcactatggccaaagagaggtgacgcgcttcgactttaccacc
accagcacgagcccagcggtgaccagcaacactgtgacgggagagaccacacccttgact
cctgttgtggccacctctgagtcggtgactgaaatcacagccagcagctttgtggtttcc
tgggtctcggcttcggacactgtgtccggattccgggtggagtatgagctgagtgaagag
ggagatgaaccacagtacctggatcttcccagcacagccacttccgtgaacatccctgac
ctgcttcctggccgaaaatacactgtgaatgtttatgagatatccgaggaaggagagcag
aatttgatcctgtctacctcacagacaacagcacctgatgcccctcctgaccctaccgtg
gaccaagttgatgacacttctattgtcgttcgctggagcagacccagggcgcccatcaca
ggatacagaatcgtctattccccatccgtagagggtagtagcacagaactcaatcttcct
gaaactgccaactctgtcactctcagtgacttgcaacctggcgttcagtataacatcacc
atctatgctgtggaagaaaatcaagaaagtactcctgtcttcatccagcaagaaaccact
ggagtcccacgttcagataaagttccccctcccagggacctgcagtttgtggaggtgaca
gatgtgaagatcaccatcatgtggacacccccagagagtccagtaaccggttaccgcgtg
gatgtgatccccgtcaacctgcccggggagcatgggcagaggctgcccgtcagcaggaac
acctttgcagaagtcaccgggctgtcgcctggggtcacttatcacttcaaagtcttcgcc
gtgaaccaggggagggagagcaagcccctgacggcacagcaggcaaccaaattggatgct
cctaccaacctccagtttatcaatgaaaccgataccacggtcatagtgacctggactcca
cctcgcgcccggatagtcgggtaccgactgactgtgggcctgacccggggaggccagccc
aagcagtacaatgtggggcccgcagcctcgcagtacccactgaggaacctgcagcctggc
tctgagtatgctgtaagcctcgtagctgtgaagggcaatcagcagagccccagagtcacc
ggagtcttcaccactctgcagcctctgggctccatcccaccttacaacacagaggtgact
gagaccaccattgtgattacatggacacctgccccaaggattggctttaagctgggtgta
cgaccaagccagggaggagaagcaccacgagaagtgacttcagagtcaggaagcatcgtt
gtatctggcctgactccaggtgtggaatacgtttacaccatctctgtcctcagggatgga
caagagagagatgcaccaattgtgaagaaagtggtgacaccactgtccccaccaacgaac
ttgcacctggaggcaaaccctgacactggagtgcttaccgtctcctgggagaggagtacc
actcctgacattactggctacagaatcaccaccactcccacaaacggccagcagggatac
tctctggaggaagtggtccatgccgatcagagttcctgcacctttgaaaacctgagtccg
ggcctggagtacaacgtcagtgtttacactgtcaaagatgacaaggaaagtgtccctatc
tctgataccatcatcccagaggtgccccaactcactgacctaagctttgttgatataact
gattcaagcatcggcctgaggtggaccccgctaaactcttccaccattattgggtaccgc
atcacagtagttgcggcaggagaaggtatccctatttttgaagattttgtggactcctca
gtaggatactacacagtcacagggctggagcccggcattgactatgacatcagcgttatc
actctcattaatggcggagagagtgcccctactacactgacacaacaaacggctgtccct
cctcccactgatctgcgatttaccaatgttggtcccgacacaatgcgtgtcacctgggct
ccaccttcatccattgaactgaccaaccttctggtacgctactcacctgtgaaaaatgag
gaggatgttgccgagctgtcaatttctccttcagacaacgcagtggtcttaacaaatctc
ctgcctgggaccgagtatttagtcagcgtctccagtgtttacgagcagcatgagagtata
cctcttagaggaagacagaaaactgctctcgactccccaagtggcattgacttttctgat
atcactgccaactctttcactgtccattggattgctccgcgagccaccatcactggctac
aagatccgccatcatcctgaacacatgagtggaagacctcgggaagatcgagtgcctccc
tctcggaattccatcaccctcaccaacctgaacccaggcacagaatatgtggtcagcatt
gtagctcttaatagcaaagaggaaagtcagcccttggttggccagcaatcaacagtgtct
gatgttcccagggacctggaagtcattgctgcaacccccactagcctgctgatcagctgg
gatgctcctgccgtcacagtgagatactacaggatcacctatggagaaacaggagggagt
agccctgtccaggacttcaccgtgcccgggagcaagtctacagctaccatcagtggtctt
aaacctggagtggactacaccatcactgtctatgctgtcaccggccgtggggacagcccg
gcaagcagcaagcccgtttctatcagttaccgaacagaaattgacaaaccatcccagatg
caagtgactgatgtccaagacaacagcattagtgtcaggtggctgccttcaagttcccct
gttactggttacagagtgaccactgctcctaaaaatggcccaggaccatcgaaaacgaaa
actgtaggtccagatcaaacagaaatgacaattgaaggcttgcagcccacagtggagtat
gtggtcagtgtctatgctcagaatcaaaatggagagagtcagcctctggttcagacagcg
gtaaccaacattgatcgccctaaaggactggcattcactgatgtggatgtcgattccatc
aaaattgcttgggaaagcccacaggggcaagtttccaggtacagggtgacctactcaagc
cctgaggatggaatccatgagctattccccgcacctgatggtgaagaagagactgcagag
ctgcaaggcctcaggccgggttctgagtacacagtcagtgtggttgccttgcacgatgat
atggagagccagcccctgattggaacccagtccacagccattcctgcaccaaccaacctg
aagtttactcaggtgacaccaaccagcctgaccgcccagtggacggcacccaatgttcag
ctcactgggtatcgggtgcgggtgaccccgaaggagaagaccggaccaatgaaagaaatc
aaccttgctcccgatagctcatctgtggttgtgtcaggactcatggttgccaccaaatat
gaagtgagtgtctatgctcttaaggacactttgacaagccgaccggctcagggagtcatt
acaactctggagaatatcagccctccaagaagggcccgtgtgacagatgctaccgagacc
accatcaccattagctggagaactaagactgagacaatcaccggcttccaagttgatgct
atcccagcaaatggccagactccaattcagagaaccatcaggccagatgtcagaagttac
accatcacaggtttacaacctggtactgactacaagatccacttgtacaccttgaatgac
aatgcccggagctcccctgtggtcattgatgcctccactgccattgatgcaccatccaac
ctgcgtttcctggccaccacacccaactccctgctggtatcatggcagccgccccgtgcc
aggattactggttacatcatcaagtatgagaagcctgggtcccctcccagagaagtggtc
cctcggccccgccccggtgtcacagaagctactattactggtctggaaccaggaacagag
tacacaatccaagtcattgccctcaagaacaatcagaagagtgagcctttgattgggagg
aaaaagacagatgagctcccccagctggtaacccttccacaccccaatcttcatggacca
gagatcttggatgttccctccacagttcaaaagacccctttcatcaccaaccctgggtat
gacactggaaacggtattcagcttcccggcacttctggtcagcagcccagtcttgggcaa
caaatgatctttgaggagcatggttttaggcgaaccacaccgcccacaacggccaccccc
gtaaggcataggccaagaccgtatccgccgaatgtaaatgaggagatccaaattggtcat
gtccccaggggagacgtagaccatcatctctaccctcatgctgtgggactcaatccaaat
gcttctacaggacaagaagctctctctcagacaaccatctcatggaccccattccaggaa
agctctgagtatatcatttcatgtcatccggttggcattgatgaagaacccttacagttc
cgagttcctggaacctctgctagtgccaccttgacaggccttaccaggggggccacctac
aacatcatagtagaggcagtaaaagaccagcagaggcagaaggttcgcgaggaggtggtc
accgtgggcaattctgttgaccagggcctgagtcagcccacagatgactcctgcttcgac
ccctacacggtctcccattatgccgttggagaggagtgggagcgattgtctgattctggc
tttaaactctcatgccagtgcttaggctttggcagtggtcatttcagatgcgattcatct
aaatggtgccatgacaacggagtgaactacaagattggggagaagtgggatcgtcaggga
gagaatggccagatgatgagctgcacgtgtcttggaaatggaaaaggagaattcaagtgt
gatcctcatgaggccacgtgctatgatgatgggaagacttaccacgtgggagaacagtgg
cagaaggaatatcttggtgccatttgctcctgcacatgctttggaggccagcggggctgg
cgctgtgacaactgccgcagaccaggggctgaaccgggtaacgaaggctccactgcccac
tcctacaaccagtattcccagagataccatcagagaacaaacactaatgtcaactgccca
attgagtgctttatgcctttggatgtacaggctgacacagaagattcccgagagtaa
DBGET
integrated database retrieval system
