Oryx dammah (scimitar-horned oryx): 120854801
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Entry
120854801 CDS
T07255
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120854801 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oda03041
]
120854801 (PRPF40A)
Spliceosome [BR:
oda03041
]
Complex A
U1 snRNP components
U1 related factors
120854801 (PRPF40A)
Complex B
120854801 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
120854801
NCBI-ProteinID:
XP_040085021
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MCSGSGRRRSSLSPTMRPGTGAERGGLMVSEMENHPPSRGLGDGERRLSGSSLCSSSWVS
ADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMPGMMS
SVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTTSGAKSMWTEHKSPDGRTYYYNTETKQ
STWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQNTI
VAGSLITKSNLHAMIKAEESSKQEECTTTSAAPVPTTEIPTTMSTMAAAEAAAAVVAAAA
AAAAAAAAANASASTSASSTVSGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLTST
PSVQDQSEVSSNTGEETSKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKE
KRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKES
FQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQL
RKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIR
ALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRF
TNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAI
ISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIE
LDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHH
RKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHK
SDSPDSDAEREKDKKEKDREGEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGEL
EKRRRTLLEQLDDDQ
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatgaggccggggacg
ggagccgagcgtggaggcctcatggtgagtgaaatggagaaccatcctccctcgcggggt
ctcggggacggggagcggagattgtccggctcaagcctctgctccagctcttgggtctct
gctgacggcttcctgaggagacggccctcgatggggcaccctggcatgcattatgcccca
atgggaatgcatcctatgggtcagagagcgaatatgcctcctgtacctcatggaatgatg
ccacaaatgatgcccccaatgggaggaccaccaatgggacaaatgcctggaatgatgtct
tcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatgcagcctgcctta
ccgccaggagtaaataatatggatgtagcagcaggtacaacttctggtgcaaaatcaatg
tggactgaacataaatcacctgatggaaggacctactactacaatactgaaacaaaacag
tctacttgggagaaaccagatgatcttaaaactcctgctgagcaacttttatctaaatgc
ccttggaaggagtacaagtctgactctggaaagccttattattacaattctcaaacaaaa
gaatctcgctgggccaaacctaaagaacttgaagatcttgaaggataccagaataccatt
gttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagctgaagaaagc
agtaaacaagaagagtgcaccacaacatcagcagccccagttcctacaacagaaattcca
accacaatgagcaccatggctgctgcagaagcagcagctgctgttgttgcagcagcagcc
gcagcagcagcagctgctgctgcagccaatgccagtgcttccacttctgcctctagtact
gtcagtggaactgttccagttgttcctgagcctgaggttacttcgattgttgctactgtt
gtagataatgaaaatacagtaacaatttctactgaagaacaagcacaacttactagtacc
ccttctgttcaggatcaaagtgaagtgtctagtaatactggagaagaaacatctaagcag
gaaactgtagctgattttactcccaaaaaagaagaggaagaaagccaaccagcaaaaaaa
acatatacttggaatacgaaagaggaggcaaagcaagcatttaaagaattattaaaagaa
aagcgtgtaccatctaatgcttcatgggagcaagctatgaaaatgatcattaatgatcca
cgatatagtgctttagcaaagttgagtgaaaaaaagcaggcctttaatgcttataaagtc
caaacagagaaagaagaaaaagaagaagcaagatccaaatacaaagaggctaaggaatcc
tttcagcgttttcttgaaaatcatgagaaaatgacttctacaactagatacaaaaaagca
gagcaaatgtttggagagatggaagtctggaatgcaatatcagaacgtgatcgtcttgaa
atctatgaagatgttttattctttctttcaaaaaaagaaaaggagcaagcaaagcagttg
cgaaagaggaattgggaagccttgaaaaacatacttgacaacatggctaatgtgacatat
tctactacttggtctgaagcccagcaatatctgatggataatccaacttttgcagaagat
gaggaattacagaatatggataaagaagatgcgttaatttgctttgaggaacacatccgg
gctttagaaaaggaagaagaagaagaaaaacaaaagagtttgcttcgtgaaaggagacga
cagcgtaaaaatagagaatcttttcagatatttttagatgaactgcatgaacatggacaa
ctgcattctatgtcatcttggatggaattgtatccaacaattagttctgacattagattc
actaatatgcttggtcagccggttttttcattaggatcaactgcacttgaccttttcaag
ttttatgttgaggatcttaaagcccgttatcatgatgaaaagaagataataaaagacatt
ctgaaggataaaggatttgtagttgaagttaatactacttttgaagactttgtggcaata
atcagttcaactaaaagatcaaccacattagatgcaggaaatattaagctggctttcaat
agtttactagaaaaggcagaagcccgtgaacgtgaaagagaaaaagaggaggctcggaag
atgaaacgaaaagaatctgcatttaagagtatgttgaaacaagctactcctccaatagaa
ttggatgctgtctgggaagatatccgggagagatttgtaaaagagccagcatttgaggat
ataactctagaatctgaaagaaaacgaatatttaaagattttatgcatgtgcttgagcat
gaatgtcaacatcatcattcaaaaaacaagaagcattctaagaaatctaaaaaacatcac
agaaagcgctcccgctctcgatcagggtcagattcagatgatgatgacagccattcaaag
aaaaaaagacagcgatcagagtctcgttctgcttcagaacattcttctagtgctgagtct
gagagaagttataagaagtcaaaaaaacataagaagaaaagcaagaagagaagacataaa
tcagactctccagactcagatgctgaaagagaaaaggataaaaaagaaaaagaccgggaa
ggcgaaaaagacagaactagacaaagatcagaatcaaaacacaaatctcctaagaaaaag
actggaaaggattctggtaattgggatacttctggcagtgaactaagtgaaggggaattg
gaaaagcgcagaaggacccttttggagcaactggatgatgatcaataa
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