KEGG   Oryx dammah (scimitar-horned oryx): 120855576
Entry
120855576         CDS       T07255                                 
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X1
  KO
K05236  coatomer subunit alpha
Organism
oda  Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:oda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oda04131]
    120855576 (COPA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oda04147]
    120855576 (COPA)
Membrane trafficking [BR:oda04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    120855576 (COPA)
Exosome [BR:oda04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120855576 (COPA)
  Exosomal proteins of bladder cancer cells
   120855576 (COPA)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 TPR_COPA_B EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_RFWD3 WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_RIG_2nd NBCH_WD40
Other DBs
NCBI-GeneID: 120855576
NCBI-ProteinID: XP_040086045
LinkDB
Position
Unknown
AA seq 1233 aa
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHEHSCPMPLTAIVICNRKLEALCNIHENIRVK
SGAWDESGVFIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
ALECGNTEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA
ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGAL
AADIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPE
LDIPPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQ
FGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQ
LCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERK
KLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLEL
GPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
YSPELKGQICKVTTVTEIGKDVIGLRISPLQFR
NT seq 3702 nt   +upstreamnt  +downstreamnt
atgctaaccaaatttgagaccaagagtgcgcgggtcaaaggactcagctttcaccccaaa
agaccttggatcctgaccagtttacacaatggggtcatccagttatgggactatcggatg
tgtaccctcattgacaagtttgatgaacatgatggtccagtacgaggcattgacttccat
aagcagcagccactgtttgtctctggaggagatgattataagattaaggtgtggaattac
aagcttcggcgctgtcttttcacattgcttgggcacttagactacatccgcactacgttt
tttcatcatgaatatccttggattctgagtgcctcagatgatcagaccatccgagtgtgg
aattggcagtctagaacctgtgtctgtgtgttaacagggcacaatcattacgtcatgtgc
gctcagttccacccttcagaagacctggtcgtgtcagccagcctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacctgtcccctggtgcagtggagtcggat
gtgagaggaataactggggttgatctgtttggaactacggatgcagtggtgaagcatgta
ctagagggtcatgatcgtggagttaactgggctgcatttcaccctactatgccacttatt
gtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaatcaaaggcatgg
gaagttgatacctgccgaggccattacaacaatgtatcttgtgctgtcttccaccctcgt
caagagttgatcctcagcaattctgaggacaagagtattcgagtctgggacatgtctaag
cggactggagttcagacattccgcagggaccatgatcgtttctgggtcttagctgcccac
cctaaccttaacctctttgcagcaggccatgatggtggcatgattgtatttaaactggaa
cgagaacggccagcctatgctgttcatggcaatatgctccattatgtcaaggaccgattc
ttacgtcagttggatttcaacagctccaaagatgtagctgtgatgcagttgcgaagtggt
tccaagtttccagtgttcagtatgtcgtacaatccagcagaaaatgcagtcctactctgt
acaagagccagcaatttagaaaatagtacctatgacttgtataccatccccaaggatgct
gactcccagaatcctgatgctcctgaagggaaacgatcctcaggcctgacagctgtttgg
gttgctcgaaatcggtttgctgtcctagatcggatgcattcgcttctgatcaagaatcta
aagaatgagatcaccaaaaaggtacaggtgcctaactgcgatgagattttttatgctggc
acaggcaacctcctgcttcgagatgcagaatccatcacgctctttgatgtacagcagaag
cggactctggcatctgtgaagatttccaaggtgaaatatgttatctggtcagcagacatg
tcccatgtagcactactggccaaacatgagcactcatgtcctatgcctcttacagccatt
gtgatctgtaaccgcaaactggaggctctatgtaacattcatgagaacattcgtgtcaag
agtggggcctgggatgagagtggggtatttatctataccacaagcaaccacatcaaatat
gctgtcaccactggggactatgggatcatccgaactctggatttacctatctacgtcacg
cgggtgaagggcaacaatgtatattgcctggacagggagtgtcgtcctcgggtgctcacc
attgatcccactgagttcaagttcaaactggccctgatcaacagaaaatatgacgaggtg
ctgcacatggtgaggaatgcaaaactcgtaggccagtctatcattgcttatctccagaag
aaggggtatcctgaagtggcgctgcatttcgtcaaggatgagaaaactcgcttcagtctg
gcactggagtgtggaaacactgagattgctctggaagctgccaaagcactggatgacaag
aactgctgggaaaagctgggagaggtggccttactacaggggaaccaccagatcgtggaa
atgtgctatcagcgcaccaaaaactttgacaaactttccttcttgtaccttatcactggc
aacctagagaaacttcgcaagatgatgaagattgctgagatccgaaaggacatgagtggc
cattatcagaatgctctctacctgggagatgtgtccgagcgggtgcggatcctgaagaac
tgtgggcagaagtcactggcgtatctcacagctgctacccacggcttagacgaagaagct
gagagcctgaaggagacatttgacccagagaaggagacaatcccagacattgaccctaat
gccaagttgcttcagccacctgcacctatcatgccgttggataccaactggcccttattg
actgtgtccaaagggttctttgagggctccattgccagcaaggggaagggaggcgcgctg
gctgctgacatcgacattgacactgttggtactgagggctggggagaggatgccgagttg
cagctggatgaagatgggtttgtggaggctacagaaggcttgggggatgatgctcttggc
aagggacaagaagaaggaggtggctgggacgtggaagaagatctggagcttcctcctgag
ctggatataccccccggggcagctggtggagctgaggatgggttctttgtgcctccaacc
aagggaaccagcccaactcagatctggtgtaataactctcagcttccagttgatcacatc
ctggccggctcttttgaaacagccatgcgactccttcacgaccaagtaggggtaacccag
tttggcccctacaagcaactgttcctgcagacctatgcccgaggccgtaccacctatcag
gctctgccctgcctgccctccatgtatggctatcctaatcgcaattggaaggatgcaggg
ctgaagaacggtgtaccagctgtgggcctgaagcttaatgacctcatccaacggttgcag
ctgtgctaccagctcaccacagttggcaagtttgaggaggctgtggaaaaattccgttcc
attttactcagtgtgccacttcttgttgtggacaataaacaagagattgcagaggctcag
cagcttatcaccatttgccgtgaatacattgtgggtttgtccatggagatagaaaggaag
aaactgcccaaagaaactctagaacagcagaagcgcatctgtgagatggcagcctatttc
acccactcaaacctgcagccagtgcacatgatcctggtgttgcgtacagccctcaacctc
ttcttcaagctcaagaactttaagactgctgccacctttgctcggcgcctgttggaactc
gggcccaagccagaggtggctcaacagacccgcaaaatcctgtctgcctgtgagaaaaac
cccacagatgcctatcagctcaattatgacatgcacaaccctttcgacatctgtgctgcg
tcttaccggcccatctaccgtggaaagccagtggagaaatgtccgctcagcggggcctgc
tactcccctgagcttaagggtcagatctgcaaggtcactacggtgacagagattggcaaa
gatgtgatcggtttgaggatcagccctctgcagtttcgctga

DBGET integrated database retrieval system