Oryx dammah (scimitar-horned oryx): 120855576
Help
Entry
120855576 CDS
T07255
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oda04131
]
120855576 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oda04147
]
120855576 (COPA)
Membrane trafficking [BR:
oda04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120855576 (COPA)
Exosome [BR:
oda04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120855576 (COPA)
Exosomal proteins of bladder cancer cells
120855576 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
120855576
NCBI-ProteinID:
XP_040086045
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHEHSCPMPLTAIVICNRKLEALCNIHENIRVK
SGAWDESGVFIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
ALECGNTEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA
ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGAL
AADIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPE
LDIPPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQ
FGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQ
LCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERK
KLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLEL
GPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
YSPELKGQICKVTTVTEIGKDVIGLRISPLQFR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaatttgagaccaagagtgcgcgggtcaaaggactcagctttcaccccaaa
agaccttggatcctgaccagtttacacaatggggtcatccagttatgggactatcggatg
tgtaccctcattgacaagtttgatgaacatgatggtccagtacgaggcattgacttccat
aagcagcagccactgtttgtctctggaggagatgattataagattaaggtgtggaattac
aagcttcggcgctgtcttttcacattgcttgggcacttagactacatccgcactacgttt
tttcatcatgaatatccttggattctgagtgcctcagatgatcagaccatccgagtgtgg
aattggcagtctagaacctgtgtctgtgtgttaacagggcacaatcattacgtcatgtgc
gctcagttccacccttcagaagacctggtcgtgtcagccagcctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacctgtcccctggtgcagtggagtcggat
gtgagaggaataactggggttgatctgtttggaactacggatgcagtggtgaagcatgta
ctagagggtcatgatcgtggagttaactgggctgcatttcaccctactatgccacttatt
gtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaatcaaaggcatgg
gaagttgatacctgccgaggccattacaacaatgtatcttgtgctgtcttccaccctcgt
caagagttgatcctcagcaattctgaggacaagagtattcgagtctgggacatgtctaag
cggactggagttcagacattccgcagggaccatgatcgtttctgggtcttagctgcccac
cctaaccttaacctctttgcagcaggccatgatggtggcatgattgtatttaaactggaa
cgagaacggccagcctatgctgttcatggcaatatgctccattatgtcaaggaccgattc
ttacgtcagttggatttcaacagctccaaagatgtagctgtgatgcagttgcgaagtggt
tccaagtttccagtgttcagtatgtcgtacaatccagcagaaaatgcagtcctactctgt
acaagagccagcaatttagaaaatagtacctatgacttgtataccatccccaaggatgct
gactcccagaatcctgatgctcctgaagggaaacgatcctcaggcctgacagctgtttgg
gttgctcgaaatcggtttgctgtcctagatcggatgcattcgcttctgatcaagaatcta
aagaatgagatcaccaaaaaggtacaggtgcctaactgcgatgagattttttatgctggc
acaggcaacctcctgcttcgagatgcagaatccatcacgctctttgatgtacagcagaag
cggactctggcatctgtgaagatttccaaggtgaaatatgttatctggtcagcagacatg
tcccatgtagcactactggccaaacatgagcactcatgtcctatgcctcttacagccatt
gtgatctgtaaccgcaaactggaggctctatgtaacattcatgagaacattcgtgtcaag
agtggggcctgggatgagagtggggtatttatctataccacaagcaaccacatcaaatat
gctgtcaccactggggactatgggatcatccgaactctggatttacctatctacgtcacg
cgggtgaagggcaacaatgtatattgcctggacagggagtgtcgtcctcgggtgctcacc
attgatcccactgagttcaagttcaaactggccctgatcaacagaaaatatgacgaggtg
ctgcacatggtgaggaatgcaaaactcgtaggccagtctatcattgcttatctccagaag
aaggggtatcctgaagtggcgctgcatttcgtcaaggatgagaaaactcgcttcagtctg
gcactggagtgtggaaacactgagattgctctggaagctgccaaagcactggatgacaag
aactgctgggaaaagctgggagaggtggccttactacaggggaaccaccagatcgtggaa
atgtgctatcagcgcaccaaaaactttgacaaactttccttcttgtaccttatcactggc
aacctagagaaacttcgcaagatgatgaagattgctgagatccgaaaggacatgagtggc
cattatcagaatgctctctacctgggagatgtgtccgagcgggtgcggatcctgaagaac
tgtgggcagaagtcactggcgtatctcacagctgctacccacggcttagacgaagaagct
gagagcctgaaggagacatttgacccagagaaggagacaatcccagacattgaccctaat
gccaagttgcttcagccacctgcacctatcatgccgttggataccaactggcccttattg
actgtgtccaaagggttctttgagggctccattgccagcaaggggaagggaggcgcgctg
gctgctgacatcgacattgacactgttggtactgagggctggggagaggatgccgagttg
cagctggatgaagatgggtttgtggaggctacagaaggcttgggggatgatgctcttggc
aagggacaagaagaaggaggtggctgggacgtggaagaagatctggagcttcctcctgag
ctggatataccccccggggcagctggtggagctgaggatgggttctttgtgcctccaacc
aagggaaccagcccaactcagatctggtgtaataactctcagcttccagttgatcacatc
ctggccggctcttttgaaacagccatgcgactccttcacgaccaagtaggggtaacccag
tttggcccctacaagcaactgttcctgcagacctatgcccgaggccgtaccacctatcag
gctctgccctgcctgccctccatgtatggctatcctaatcgcaattggaaggatgcaggg
ctgaagaacggtgtaccagctgtgggcctgaagcttaatgacctcatccaacggttgcag
ctgtgctaccagctcaccacagttggcaagtttgaggaggctgtggaaaaattccgttcc
attttactcagtgtgccacttcttgttgtggacaataaacaagagattgcagaggctcag
cagcttatcaccatttgccgtgaatacattgtgggtttgtccatggagatagaaaggaag
aaactgcccaaagaaactctagaacagcagaagcgcatctgtgagatggcagcctatttc
acccactcaaacctgcagccagtgcacatgatcctggtgttgcgtacagccctcaacctc
ttcttcaagctcaagaactttaagactgctgccacctttgctcggcgcctgttggaactc
gggcccaagccagaggtggctcaacagacccgcaaaatcctgtctgcctgtgagaaaaac
cccacagatgcctatcagctcaattatgacatgcacaaccctttcgacatctgtgctgcg
tcttaccggcccatctaccgtggaaagccagtggagaaatgtccgctcagcggggcctgc
tactcccctgagcttaagggtcagatctgcaaggtcactacggtgacagagattggcaaa
gatgtgatcggtttgaggatcagccctctgcagtttcgctga
DBGET
integrated database retrieval system
