Oryx dammah (scimitar-horned oryx): 120855730
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Entry
120855730 CDS
T07255
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04612
Antigen processing and presentation
oda05145
Toxoplasmosis
oda05152
Tuberculosis
oda05164
Influenza A
oda05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
120855730 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
120855730 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
120855730 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
120855730 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
120855730 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oda01001
]
120855730 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oda04054
]
120855730 (CIITA)
Enzymes [BR:
oda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120855730 (CIITA)
Protein kinases [BR:
oda01001
]
Serine/threonine kinases: Other
TAF1 family
120855730 (CIITA)
Pattern recognition receptors [BR:
oda04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120855730 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
120855730
NCBI-ProteinID:
XP_040086294
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MNHFQTILTQVRMLLSSHRPSQVQALLDNLLAEELLSREYHYALLHESDDEALARKISLT
LLEKEDPDLALLGWIWSGLQAPTAERDPSYKDPGGSGQCPTMELGHLEGSYLELLNSSAD
PLQLYHLYDRMDLTGEEEIDLCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQ
YVFQDTQLEGLSKDIFIEHIGLEEMTSESVEVLEEAGQKSQKRPFPEELPVDLKHRKLAE
PLTMPVVTGTFLVGPVSDSLAQPCPPPPALFNTEPASSQTRLKDLAPPSSSLLSCLSLPA
GPIQIIPSLSTLPQGLWPISGTGTGVSSILIYQSETPPASQTPPSSGPAVQSLPKSPDRP
GSTSPFAPSAADLPSMPEPALTSRANLTEDEMSPTKCPAAGGASSKLPKWPESVEQFYQS
LRDKYQAQPAGPEGTLVEMDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAKVLLAA
SDRQQPRETRVIAVLGKAGHGKSHWAWAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYR
LQDLLSSLGPQPLPVDDEVLSYIARRPNRVLLILDGFEELEAHDGSLHSTGRPGSAEPRS
FRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQSLSKADALFEVAGFSAQQAETYVRRYFEL
EGTAEHQEKVLALLRAQPFLLSHSHSPTVCRAVCQLAEALLQRSDEAQLPSTLTGLYVGL
LGPAARDGPSGALAGLARLAWELGRAHQRGLKVGCFASAEARAWAVAQGWLQPTPGAPET
ELAFSSFLLQCFLGAVWLALSSEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQ
PRAGCLGALAGPAASTSVDRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQH
VLQGLPARLSFLGTRLTPPDTHVLGSALQAAGRDFSLDLRSTGVDPSGLGSLVGLSCVTR
FRAALSDTVELWESLQQRGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSS
EAAAGELPAVRDLKKLEFALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGV
AQLLATFPQLKALETLNLSQNNITDVGACKLAEALPALAASLLRLSLYNNCICDVGAESL
AHVLPDMVSLRVLDVQYNKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLD
PRIILR
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacttccagaccatcttgactcaggtccggatgttactctctagccatcggccg
agccaagtgcaggcgcttctggacaacctgctggcagaagagctcctctccagggagtac
cactatgccctgctccatgagtctgatgatgaggctctggccaggaagatctccttgacc
ctgctggagaaagaagacccagacttggccctcttggggtggatctggagtgggctgcag
gcccccacagccgagagggaccccagctacaaggaccctggtggcagtggacagtgccct
accatggagctggggcatctagaaggcagttacttagaacttctcaacagcagtgctgac
cctttgcagctctaccacctctacgaccggatggatctgacaggagaagaagagatagat
ctctgctcagagcctgacacagacaccatcaactgcgaacagttcagcaggctgttgtgt
gacatggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaattggaccag
tacgtcttccaggacactcagctggagggcctgagcaaagacattttcattgagcacata
ggattggaagaaatgaccagcgagagtgtggaggtgctggaggaagcagggcagaaaagt
cagaaaagacccttcccagaggagctgcctgtggatctgaagcaccggaagctagccgag
cccctcaccatgcccgtggtgactggcactttcctggtggggccagtgagcgactccttg
gctcagccctgcccgccgcctcctgctctgttcaacacggagccagcatccagccagacc
cggctgaaggacctggcacctccttccagttccttgttgagctgcctgagtcttcccgcg
ggacccattcagattatccccagtctctccactctgccccaggggctctggccgatctca
gggactgggacaggggtctccagtatactcatctaccaaagtgagacgcccccagccagc
caaacaccgccgtccagtgggcctgctgtccagagccttcccaagtccccagaccggcct
ggctccaccagcccctttgccccgtctgccgctgacctccccagcatgccagaaccagcc
ctgacctcccgtgcaaacctgacagaggatgagatgtcccccaccaaatgcccagcagct
ggcggggcctccagcaaacttcccaagtggcctgagagtgtggagcagttctaccagtca
ctacgggacaagtaccaggcccagcccgccggcccagaaggcaccctggtggagatggac
ttggtgagggtgaggctggagaagagcagcgggaagagccaggagagagagctggccacc
ctggactgggcagagcggcagccggcccgagggggtctggccaaggtgctcctggctgcc
agcgaccgccagcagccccgagagacgcgggtgatcgctgtgctgggcaaagcgggacat
gggaagagtcactgggcctgggccgtgagccgggcctgggcccacggccagctgccccag
tacgactttgtcttctgtgtcccctgccaccgtttggaccgtccagggacctcctaccgc
ctgcaggatctgctgtcctccctgggcccgcagccgctgccggtggacgacgaggtcctc
agttacatcgcaaggaggcccaaccgcgtcctgctcatcctggatggcttcgaggagctg
gaagcccacgacggctccctacacagcacagggcgccccgggtcggcagagccccgctcc
ttccgggggctgctggcgggcctcctccagcgcaagctgctgcggggctgcaccctgctg
ctcacggcctggccccggggccgcctggcccagagcctgagcaaggcggacgccctgttc
gaggtggctggcttctcggcccagcaggctgagacctacgtgaggcgttactttgagttg
gaggggaccgccgagcaccaagagaaggtcctggcactcctgcgggcccagccgttcctc
ctgagccacagccacagccccaccgtgtgccgggccgtgtgccagctcgcagaggccctc
ctgcagcggagtgatgaagcccagctgccctccacgctcacgggcctctatgtgggcctg
ctaggcccagcagcccgcgatggcccctcgggggctctggcgggactggccaggctggcc
tgggagctgggccgtgcgcaccagaggggcctaaaggtgggctgcttcgcgtcggcagag
gcgagggcctgggctgtggcccaaggctggttgcagcccaccccgggggccccagagacg
gagctggccttctctagcttcctcctgcagtgcttcctgggggccgtgtggctggctctg
agcagcgaaatcaaggacaaggagctgccgcagtatctggccttgaccccgaggaagaag
cggccctatgacaactggctggagggcgtgccgcgcttcttggtcggactggtcttccag
cctcgcgccggctgcctgggggccctggcagggccggcggcctccacgtcggtggacagg
aaacagaaggtgctcacgaggtacctgaagcgtctgcagcccgggacgctgcaggcaggg
cggctgctggagctgctgcattgtgcccacgaggcactggaccccgggctctggcagcac
gtgctgcaggggctcccggcccgcctctccttcctgggcacgcggctcacacctcccgac
acccacgtgctgggcagcgccctgcaggcggcgggccgagacttttccctggacctccgc
agcactggcgtcgacccctctggactggggagcctcgtgggactcagctgtgtcacccgt
ttcagggctgcgttgagtgacaccgtggagctgtgggagtccctgcagcagcgtggggag
gccaagctactccgggcggtggaggagaagttcaccattgagcctttcaaggccaagtcc
atgaaggatgtggaagaccttggcaatctcgtgcagatccagaggacaagaagctcctct
gaagcagcagctggggagctccctgctgtccgagacttaaagaagctggagtttgcgctg
ggccctgtcttaggcccacaggtttttcctaaactggtgaagatcctcgaggcctttact
tcccttcagcatctggacctggactcgctgagcgagaacaagattggggacgagggtgtt
gcccagctcttggccaccttccctcagctgaaggccctggagacactcaacttgtcccag
aacaacatcaccgacgtgggtgcctgtaagctggccgaggctctgcccgcgctggccgcg
tccctcctcaggctgagcttgtacaataactgtatctgcgacgtgggagccgagagcctg
gcgcacgtgcttccagacatggtgtccctccgggtgctggacgtccagtacaacaagttc
acagccgctggggcccagcagcttgccgctggcctgagaaagtgccctcaggtgaagaca
ctggcgatgtggacgcccaccatcccctttggcgtccaagaacatctgcagcagctggac
ccacgaatcattctgagatga
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integrated database retrieval system
