Oryx dammah (scimitar-horned oryx): 120855856
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Entry
120855856 CDS
T07255
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120855856 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120855856 (GSPT1)
03012 Translation factors [BR:
oda03012
]
120855856 (GSPT1)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120855856 (GSPT1)
Translation factors [BR:
oda03012
]
Eukaryotic type
Release factors
120855856 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
120855856
NCBI-ProteinID:
XP_040086583
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MDPGSGGGGGGGGGGGGSSSSSDSAPDCWDQADMEAPGPGPCGGAGGPLAAAAAEAQREH
LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAQSPASPAGAAANNHGAGSGAGGPSAP
VESSQEEQSLLCEGSNSAVSMELSEPIVENGETEMSPEESWENKEEISEAEPDGGSLGDG
RPAEESAQEMMEEEEEIPKPKSVAAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGM
VDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP
GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLIN
KMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYI
GLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHN
VEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVII
EHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTA
GTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggcagtggtggcggtggcggtggcggcggcggcggcggcgggagcagcagc
agcagcgactcggcgcccgactgttgggaccaggcggacatggaagctcccgggccaggc
ccgtgcggcggcgccggcggccccttggcggcggcggcggccgaggcccagcgtgagcac
ctcagcgcggccttcagccggcagctcaacgtcaacgccaagcccttcgtgcccaacgtc
cacgccgccgagttcgtgccgtccttcctgcggggcccggcccagtcgcctgcatctcca
gctggcgccgccgccaacaaccacggagccggcagcggcgcgggaggcccttcggcacct
gtggaatcttctcaagaggaacagtcattgttgtgtgaaggttcaaattcagctgttagc
atggaactttcagaacctattgtagaaaatggggagacagagatgtccccagaagaatca
tgggagaacaaagaagaaataagtgaagcagagccagatggtggttctttgggagatgga
aggcccgcagaggaaagtgcccaggaaatgatggaggaggaagaggaaataccaaaacct
aaatctgtggctgcgccgccaggcgctcctaagaaggaacacgtaaatgtcgtattcatt
gggcacgtagatgctggcaagtcaaccattggaggacaaataatgtatttgactggaatg
gttgacaaaaggacacttgagaaatatgaaagagaagctaaagaaaaaaacagagaaact
tggtacttatcttgggccttagacacaaatcaggaagaaagagacaagggtaaaacagta
gaagtgggtcgtgcctattttgaaacggaaaagaagcattttacaattctagatgcccct
ggccacaagagttttgtcccaaatatgattggtggtgcttctcaagctgatttggctgta
ctggtaatctctgccaggaaaggagagtttgaaactggatttgagaaaggaggacagaca
agagaacatgccatgctggcaaagacagcaggcgtaaagcacttgattgtgctcattaat
aagatggacgacccaacagtaaactggagcaatgagagatacgaagaatgtaaagagaaa
ctggtcccgtttttgaaaaaagttggctttaatcccaaaaaggacattcacttcatgcca
tgctcaggactgacgggagcaaatcttaaggagcaatcagatttctgtccttggtacatt
ggactgccatttattccatatctggataatttgccaaacttcaatagatcagttgatgga
ccaatcaggctgccaattgtggataagtacaaggatatgggcactgtggtcctgggaaag
ctggaatcaggatctatttgtaaaggccagcagcttgtgatgatgccaaacaagcacaat
gtggaagttcttggaatcctttccgatgatgtggaaaccgattctgtagccccaggtgaa
aacctcaaaatcagactgaaaggaattgaagaggaggagattcttccagggttcatactt
tgtgatccgaataatctttgtcattctggtcgcacatttgatgcccagatagtgattata
gagcacaagtccatcatctgcccaggttataatgcggtgctgcatattcatacctgtatt
gaagaagtcgaaataacagccttaatctgcttggtagacaagaaatcaggagaaaaaagt
aagactcgaccccgttttgtgaaacaggatcaagtgtgcattgcccgcttgaggacagca
ggaaccatctgccttgagacctttaaagacttccctcagatgggtcgctttactttaaga
gatgagggtaagaccattgcaattggaaaagttctgaaactggtgccagagaaagactaa
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