Oryx dammah (scimitar-horned oryx): 120856471
Help
Entry
120856471 CDS
T07255
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04136
Autophagy - other
oda04140
Autophagy - animal
oda04145
Phagocytosis
oda04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
120856471 (ATG16L1)
04140 Autophagy - animal
120856471 (ATG16L1)
04136 Autophagy - other
120856471 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120856471 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oda04131
]
120856471 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
oda03029
]
120856471 (ATG16L1)
Membrane trafficking [BR:
oda04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
120856471 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
120856471 (ATG16L1)
Mitochondrial biogenesis [BR:
oda03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120856471 (ATG16L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
ATG16
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
eIF2A
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Beta-prop_VPS8
CFAP251_N
NBCH_WD40
Tricorn_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_ACSF4
Beta-prop_NWD2_C
CCDC93_CC
ZapB
DUF2332
ASA1
CC_Bre1
Vma22_CCDC115
DUF8181
Tricorn_N
HTH_6
HEF_HK
PALB2_WD40
YicC-like_N
Fez1
Motif
Other DBs
NCBI-GeneID:
120856471
NCBI-ProteinID:
XP_040087740
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MSSGLRATVFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAHKLQAEK
HDVPNRHEISPGHDGSWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DKEMQMNEAKIAEYLQTISDLETECQELRTKLQDLERANQTLKDEYDALQITFTALEEKL
RKTSEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVLADETSEHPEETSPVRAISRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSDAAR
RRSVSSFPVPQDNVDPHPGAGKEVRVPTTAVSVFDAHDGEVNAVQFSPGSRLLATGGMDR
RVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQ
TFSAPGFKCGSDWTRAVFSPDGSYVAAGAAEGSLYIWNVLSGKVEKILSKHHSSSINAVA
WSPAGSHVVTVDKGSKAVLWSEY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcctccgcgccaccgtcttcccgcgttggaagcgccacatctcggaggag
ctgaggcgccgggaccggctgcagaggcaggcgttcgaggagatcatcctgcagtataac
aagttgctggaaaagtcagatcttcattcagtgctggcccataagctacaagccgaaaag
catgacgtaccaaacaggcatgagataagtcccggacatgatggttcatggaatgatagt
cagctgcaagaaatggcccagctgagaattaaacaccaagaagaactgactgaattgcac
aagaaacgtggggagttagcccagttggtgattgacctgaataaccaaatgcagcagaag
gacaaggagatgcagatgaacgaagccaaaattgcagaatacctgcagaccatctctgac
ctggagaccgagtgtcaggagctgcgcactaagcttcaggaccttgaaagagccaaccag
accctgaaggatgaatacgacgccctgcagatcactttcaccgccctcgaggagaagctg
cggaaaacttccgaggagaaccaggagctggtcacccggtggatggccgagaaagcgcag
gaggccaaccgcctaaacgcggagaatgaaaaggactcaaggaggcggcaagcccggctg
cagaaggagctcgcagaagccgcgaaggagcctctgccagttgagcaggatgatgacatt
gaagtccttgcggatgaaacctctgagcaccctgaggagacctctcccgtgcgagccatc
agcagagctgccactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttggtctgtccgagtctccccttttgggacatcactcttctgacgctgccagg
aggcgctctgtctcttcctttccagttccccaggataacgtggatcctcatcccggtgct
ggtaaagaagtgcgagtgccaacgactgcagtgtctgtctttgacgcgcatgacggggag
gtcaacgctgtgcagttcagcccaggttcccggctcctggccacaggaggcatggatcgg
agggtgaagctctgggaagtgtttggagacaaatgtgaattcaagggctccctgtctggc
agtaatgcaggaattacaagcattgaatttgatagtgctggatcttacctcttagcagct
tctaatgattttgcaagccgcatctggaccgtggatgactaccggttacggcacacgctc
acgggacacagcggcaaagtgctgtctgccaagttcctgctggacaacgcgcgtatcgtt
tctggaagtcacgaccggaccctcaaactctgggatctacgcagcaaagtctgcataaag
acggtatttgcgggatccagctgcaatgacatcgtctgcacagagcagtgtgtgatgagt
ggacattttgacaagaaaattcgtttctgggacatccggtcagagagtattgtccgagag
atggagctcttgggaaagatcactgccctggacttaaacccagaaagaactgaactcctc
agctgctctcgagatgacctgctgaaaattatagacctacgaataaatgctgtcagacag
acattcagtgcaccaggcttcaaatgcggctccgactggacgagagctgtgttcagccct
gacggcagttatgtagcagcgggcgcggccgagggctcgctgtacatctggaacgtgctg
tccgggaaagtggagaagatcctctcaaagcatcacagctcgtccatcaacgcggtggcc
tggtcccccgccggctcccacgtggtcactgtggacaaaggaagtaaggccgtgctgtgg
tcggagtattga
DBGET
integrated database retrieval system
