Oryx dammah (scimitar-horned oryx): 120857609
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Entry
120857609 CDS
T07255
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120857609 (TNRC6B)
03036 Chromosome and associated proteins [BR:
oda03036
]
120857609 (TNRC6B)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120857609 (TNRC6B)
Chromosome and associated proteins [BR:
oda03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120857609 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
M_domain
RRM_1
Motif
Other DBs
NCBI-GeneID:
120857609
NCBI-ProteinID:
XP_040089171
LinkDB
All DBs
Position
Unknown
AA seq
1814 aa
AA seq
DB search
MQTNEGEVSEESSSKVEQEDFVMEGHGKTPPPGEESKQEKEQEREEQLMEDKKRKKEDKK
KKEATQKVTEQKTKVPEVTKPSLSQPTAASPIGSSPSPPVNGGNNAKRVAVPNGQPPSAA
RYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPSTAPGANPNNAQVTGALL
QSEGGAAPESTLGGAAASNYANSTWGPGASSNSGASPNPIHIWDKVIVDGSDMEEWPCIA
SKDTESSSENTTDNNSASNPGSEKSTLPGSTTSNKGKGSQCQSASSGNECNLGVWKSDLK
AKSVQSSNSTTESNNGLGNWRNVSGQERIGPGSGFSNFNPNSNPSAWPALVQEGNSRKGA
LETETSNSSAQVSAVGQASREQQSKMENAGVNFVVSGREQAQILNTDGPKNGNTNSLNSS
SPNPMENKGMPFGMGLGNASRSTDAPSQSTGDRKTGSVGSWGAARGPSGTDTASGQSNSG
NNGNNGKEREDSWKGAPVQKSTGSKSDSWDNNNRSTGGSWNFGPQDSNDNKWGEGNKMTS
GVSQGEWKQPTGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGSAQAPCWGRSSSS
TGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSNTGWG
QTQIKQDTVWDIEEVPRPEGKSDKGTEGWESAATQTKSSGGWGDAPSQSNQMKSGWGELS
ASAEWKDPKNTGGWNDYKNNNSSNWGGGRPDEKTSSSWNENSSKDQGWGGGRQPNQGWTS
GKNGWGEEVDQAKTSNWENAASKPVSGWGEGGQGEIGTWGSSGNASLASKGGWEDCKRSP
AWTETGRQPGSWNKQHQQQQPPQQLPPPQPESSGSWGGPAPPPPGNGRPSNSNWSSGPQP
VTPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPNSYNYKNVNLWDKNSQGGPAPREAN
LPAPMTGKSASVWSKSTPSAPDNGTSAWGEPNESSPGWGEMEDTGASTTGWGTAPSNAPN
AMKPNSKSMQDGWGENDGPVAGTRHPSWEEEDDGGVWNTAGSQGSTSSHNSASWGQGGKK
QMKCSLKGGNSDSWMNPLAKQFSNMGLLSQTEDNPSSKMDLSVGSLPDKKFDVDKRAMNL
GDFNDIMRKDRSGFRPPNSKDMGTTDSGPYFEKGGNHGLFGNSTAQSRGVHTPVQPLNSS
PNLRAQVPPQFISPQVSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLA
CQLLLQQQQQQQLLQNQRKLSQAVRQQQEQQLARMVSALQQQQQQQQQQQRQPSMKHSPS
HPVGPKPHLDNMVPNALNVGLPDLQTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQ
WTSMMEVPSVATQEANMHKNVAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPA
KSPPTNKIGSKSSNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDH
QLLRDNTTGSNSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPT
HLSNKMWKNHISSRNTTPLPRPPPGLTNPKPSSPWSSTAPRSVRGWGTQDSRLASASTWS
DGGSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKA
QTALHMCVLGNTTILAEFATDDEVSRFLAQAQPPTPAATPSAPAAGWQSLETGQTQSDPV
GPALNLFGGSTGLGQWSSSAGGSSGADLAGASLWGPPNYSSSLWGVPTVEDPHRMGSPAP
LLPGDLLGGGSDSI
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccaatgagggagaagtatcggaagaaagcagttccaaggtggaacaggaggat
tttgtaatggaagggcatggcaagactccacctcctggtgaagaaagcaaacaagagaag
gagcaagaaagggaagaacagttaatggaagacaagaaaaggaagaaagaggataaaaag
aaaaaagaagccactcagaaggtcacggaacaaaaaaccaaagtgcccgaagtgacgaaa
ccaagtttaagccaaccaacggccgccagcccgattggcagctctccatcgccaccagtc
aatggtggcaacaatgccaaaagggtggcagtgccgaacggacaaccgccaagcgccgcc
cgctacatgcctcgggaggtgccgccgcgattccgttgccagcaggaccacaaagtgtta
ctaaaacgtgggcagccccctccaccgtcctgcatgctcctcgggggtggggcagggcct
cctccctccacggcgcccggagcaaaccccaacaacgcacaagtgacaggagcgctgctg
cagagcgagggtggggccgcaccagagtcaacccttggaggtgctgctgcttcaaattat
gcaaattccacttggggcccgggagcctcctccaacagcggcgcctcccccaaccccatt
cacatctgggacaaggtgattgtagacgggtctgacatggaagagtggccttgcattgcc
agcaaagacactgagtcttcttccgaaaacaccaccgataacaacagtgcctcgaaccct
ggctctgagaagagcactctgccaggaagcaccactagtaacaaaggaaaagggagccag
tgccagtctgcaagttccgggaacgaatgtaatcttggggtctggaaatctgaccttaag
gctaaatctgttcaatcttccaattctactacggagagcaacaatggactaggaaactgg
aggaatgtgagtggtcaggagagaattggacctggctctggcttcagcaactttaaccca
aatagcaacccatctgcctggccagcactggtccaagaaggaaattctaggaaaggggca
ttggaaacggagactagtaattccagtgcacaggttagcgcagtaggtcaggcatccagg
gaacagcagtcaaagatggaaaatgcgggtgttaattttgttgtctctggcagagagcag
gctcaaattcttaacactgatggaccaaaaaatggaaacactaactccttgaactcaagt
tcaccaaaccccatggagaataagggaatgccctttgggatgggcttggggaacgcctcc
aggagcactgatgccccttcacaaagcactggagatcgaaagactgggagtgttggatct
tggggtgcagctagggggccttctggaactgacacagcctctggacaaagcaattctgga
aacaatgggaacaatggaaaggagagagaggactcctggaagggagctcctgttcagaaa
tcaaccgggtcaaaaagtgactcttgggacaacaataacaggtctacgggtgggtcctgg
aactttggccctcaggactctaatgacaacaaatggggtgaagggaacaaaatgacatcc
ggggtctctcagggagaatggaaacagccgactgggtctgacgagttgaaaattggagaa
tggagtggtccaaaccaaccaaattctagcactggagcatgggacaatcagaagggccac
cccctccctgaaaaccaaggcagtgcccaggctccctgttggggaagatcttccagctcc
acgggaagtgaagttggaggtcaaagcactggaagcaaccacaaagcaggaagtagtgac
agtcacaattctggccgtcggtcgtaccggcccacacatcctgattgtcaggctgtcttg
cagactcttttgagccgaactgatttggaccccagggtgctctcaaacactggctggggc
caaactcaaattaagcaagacacggtgtgggacattgaagaggtgccaaggcccgagggg
aagtctgacaaagggactgaggggtgggagagcgctgccacacagaccaagagctcaggg
ggctggggagacgcgcccagccaaagcaatcagatgaagtctggatggggagagctctca
gcctctgcagagtggaaagaccccaagaacacaggaggctggaacgactataagaacaac
aactcttccaactggggagggggacgaccggacgagaagacatcttcctcttggaatgag
aactccagcaaggatcaggggtggggaggtggacgccagcccaaccaaggatggacttct
ggaaagaatggttggggagaggaggtcgatcaggcgaaaaccagcaattgggaaaatgct
gcaagtaaacctgtgtccgggtggggcgaaggtgggcagggtgaaatcgggacttggggg
agcagtgggaatgcaagcctggcttccaaaggcgggtgggaagattgcaaaaggtctccg
gcgtggacggagacaggcagacagcccggttcctggaacaaacagcaccaacagcagcag
ccgccgcagcagctaccaccaccacaacctgagtcctctggctcctggggaggcccagcc
ccaccacctccaggcaacggacgaccttccaattccaactggagcagcgggccgcagcca
gtaacccccaaggatgaggaacccagcggttgggaggagccgtccccacagtcgatcagt
cggaagatggacattgacgatggcacttccgcatggggagaccccaacagttacaactac
aagaatgtgaatctgtgggataagaattcccaagggggcccagcacctcgagaagcaaac
ctgcctgccccgatgaccggcaaatcagcatcagtctggagcaaaagcacaccatctgct
ccagataatggtacttcagcttggggtgagccaaatgaaagcagtcctgggtggggcgag
atggaagacacgggagcatcgacaacaggctgggggactgcaccctccaatgctccaaat
gccatgaaacctaattccaaatctatgcaagatggctggggggagaatgatgggccagtg
gcaggaactcgccatcccagctgggaagaggaggatgatggaggagtctggaacactgcc
ggctctcagggaagcacttcctcccacaactcagcaagctggggacaaggaggaaagaaa
caaatgaagtgctcactcaaaggaggaaacagtgattcatggatgaatcctcttgccaaa
cagttttcaaatatgggattgctgagtcaaactgaagataacccaagtagcaaaatggat
ttgtctgtagggagccttccagataaaaaatttgatgtggacaagcgagcaatgaatctc
ggggattttaatgatatcatgaggaaggatcgatctgggttccgtccacctaattccaaa
gacatgggaaccacagatagtgggccttattttgagaagggtggcaatcatggtttgttt
ggaaatagcacagcacaatcgagaggcgtgcacacccccgtgcagccactgaactcttct
cctaatctccgggcgcaagtgcctccccagttcatttccccccaggtttctgcctcaatg
cttaagcagtttcccaacagtggcctgaatccaggtcttttcaacgtggggccccagtta
tctcctcaacaaattgccatgctgagccagcttccacagattccccagtttcagttggca
tgtcagcttctcctgcagcagcagcaacagcagcagttgttacaaaaccagaggaagctt
tctcaagccgttcgccagcagcaggaacagcagctggctcggatggtgagcgccctccag
cagcagcagcagcaacagcagcagcagcagaggcagcccagcatgaagcattcgccatct
catcccgttgggcccaagccacatctggacaacatggtacccaacgctctgaatgtgggg
ctcccagaccttcaaaccaaagggccaatacctggatatggttctggcttcagctccggc
ggcatggactacggcatggttggtgggaaggaggctggaacagagtctcgctttaaacag
tggacctccatgatggaggtgccctctgtagccacacaggaagccaatatgcacaaaaat
gtcgctatcgtggcccctggtaagacccgaggagggtcaccatacaaccagtttgacatc
atcccaggtgacacactgggtggccatacgggtcctgctggtgatagctggttacctgcc
aaatctccaccaacaaataaaatcggaagtaaatctagcaatgccagttggcctccagaa
ttccaaccaggagtgccatggaaaggtatccaaaacattgaccctgaatctgacccctat
gtcactccaggaagtgtgctggggggtacagccacatctcccattgtagatactgaccac
caacttctgcgggataacaccacagggtctaattcttccctcaacacctcgctgccttca
cctggtgcctggccctacagtgcctctgacaactcctttaccaacgttcatagcacttca
gcaaagtttcctgattataaatcaacatggtccccagatcccataggacacaaccccact
catctctccaacaagatgtggaaaaaccatatttcctcaaggaacactacaccgctgccc
cgcccgcctcctggtctgaccaaccccaaaccatcatctccctggagcagcacagcaccc
cgctcagtcagggggtgggggacacaggactcacggctcgcctccgcctctacctggagt
gatggtggttcagttcgtcctagttactggctggttcttcacaatctcactccacagatt
gatgggtcaaccttgagaaccatctgcatgcagcatggcccactgctgacattccatctg
aacctaacccagggcactgccctgatccgatacagcaccaaacaggaggcggccaaggcc
caaactgcactgcacatgtgtgtgttgggaaacactaccatcctggctgagtttgccacc
gatgacgaagtcagccgctttctggcacaagctcagccccctacacctgcggcaaccccg
agtgcgcctgccgcgggctggcagtccctggagaccggccagacacagtcagatcccgtc
ggacctgctctgaatcttttcggtgggtccacagggctcgggcagtggagcagcagtgct
ggtggcagcagcggggccgatcttgccggcgcttcattgtggggcccccccaactactct
tctagcttgtggggagtcccgaccgtggaagaccctcataggatgggcagccctgctcct
ttactacctggtgaccttctgggaggagggtcggattcaatctga
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integrated database retrieval system
