Oryx dammah (scimitar-horned oryx): 120858163
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Entry
120858163 CDS
T07255
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120858163 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oda03041
]
120858163 (PRPF40B)
Spliceosome [BR:
oda03041
]
Complex A
U1 snRNP components
U1 related factors
120858163 (PRPF40B)
Complex B
120858163 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
DTW
Motif
Other DBs
NCBI-GeneID:
120858163
NCBI-ProteinID:
XP_040089968
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGIMPPMLPPMGAPPPLTQIPGMVPPMMPG
MLMPAVPVTAATAPGADTASSAVAGTGPPRALWSEHVAPDGRVYYYNADDKQSVWEKPSV
LKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEALVKQEAAGKQQQP
QTLQPQPPQPQPDPPPAPPGPTLLPTGLLEPEPGGSEDCTVSEAAQPPEQGFLQQPEEGP
GSSAGQHQPPQQEEEESKPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMV
VTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTR
YRRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMS
SVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLR
ERRQQRKNREAFQTFLDELHETGQLHSMSTWMELYPAVSTDIRFANMLGQPGSTPLDLFK
FYVEELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFN
SLLEKAEAREREREKEEARRLRRREAAFRSMLRQAVPALELGTAWEEVRERFVCDSAFEQ
ITLESERIRLFREFLQVLETECQHLHSKGRKHGRKGKKHHRKRSHSPSVSWRGSESGDEE
LPPPSLRPPKRRRRNPSESGSEPSSSLDSVESGGAALGGRGSPSRLLLGSGGKRREGRRT
GLRLPQTDHGLRKAKKPKKKTKKRRHKSNSPESETDPEEKAAKESDEKEPEQDKDRDLRR
AELPNRSPAFGIKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctcctccaggaatccccccaccgtttcctccaatggggctccctcccatgagt
cagagaccaccagccatcccccccatgccacctggcatcatgcccccaatgctcccacca
atgggggcaccaccaccactcacacagataccaggaatggtacctcccatgatgccagga
atgctgatgccagcagtgcctgtcaccgcagcgacggctccgggtgcggacaccgccagc
tctgctgtggctgggacaggccctccgagggccctgtggagtgagcatgtggcccctgat
gggcgtgtctactactacaatgctgacgacaagcaatccgtgtgggagaagcccagcgtg
ctcaagtccaaggcagagctcctgctgtcccaatgtccctggaaagagtacaagtcggac
acaggcaaaccttactactacaacaatcagagtaaggagtcccgctggacccggcccaag
gacctggatgacctggaggctctagtcaaacaagaagctgcagggaaacagcagcagcca
cagacgctacagccacagcctcctcagcctcagcccgatcccccacctgcgccgcccggc
cccaccttgctgcccacaggcctcctagaacctgagccgggcgggagtgaagattgcacc
gtgtcagaggctgcccagcccccggaacaggggttcctgcagcagccagaggagggcccc
ggcagttctgctggacagcatcagccaccacagcaagaggaagaagaatcaaaaccagag
ccggagagatctgggctcagttggagcaaccgggagaaggcaaagcaggcctttaaggag
ctgctgagggacaaggctgtcccctccaatgcttcgtgggaacaggccatgaagatggtg
gtcactgacccccgttacagtgccttgcccaaactgagtgagaaaaagcaggcattcaat
gcctacaaagcgcagcgggagaaggaggagaaggaagaggcccggctaagagccaaggag
gccaagcagaccttgcagcatttcctggagcagcatgaacgcatgacctccaccacccgc
taccggcgggcagaacagacctttggggagctggaggtctgggctgtggtccctgagagg
gatcgaaaagaggtttatgatgatgtcctcttcttcctggccaagaaggagaaggaacaa
gccaagcagctgcggcgccgcaacatccaggccctgaagagcatcctagatgggatgagt
agtgtcaacttccaaaccacatggtcccaggcccagcagtacctcatggataaccccagc
tttgctcaggaccatcagctacagaacatggacaaggaagatgcgctgatctgctttgag
gagcacatccgagctttggagagggaggaggaggaagagcgagagcgagcccgacttcgg
gagcggcgccagcaacgcaagaaccgggaggccttccagaccttcctggatgagctgcac
gagacagggcagctgcactccatgtccacctggatggagctgtacccagcggtcagcact
gatatccgctttgccaacatgctgggccagccgggctccaccccgctggacttgttcaag
ttctatgtggaggagttgaaggcacgattccatgatgagaagaagatcataaaggacatc
cttaaggaccggggcttctgcgtggaggtgaacacagccttcgaggacttcgcccacgtc
ataagctttgacaagagggctgctgcgctggatgcaggcaacatcaagctgactttcaat
agtctgctggagaaagcagaggcgcgtgagagagagcgggagaaggaggaggcccggcgg
ctgcggcgcagggaggctgccttccgaagcatgctgaggcaggctgtgcctgctctggag
ctgggcacggcctgggaagaggtccgtgagcgctttgtgtgcgactcagcctttgagcag
atcaccctggagtcggagcggatccggctctttcgggagttcctgcaggtactggagacg
gaatgccagcacctccacagcaaaggccggaaacacggcagaaagggcaagaagcaccat
cgcaagcgttcccactcgccttcagtgagttggcggggctctgagtcaggagacgaggag
ctgcccccaccctctctccggccccccaagcggaggcgacggaacccctcggagtcaggc
tctgagccctcttcctcacttgattctgttgaaagtgggggtgctgcccttggaggacgg
ggttccccctctcgccttctcctcggatcaggcgggaagcggagagaaggaaggaggact
ggactgagacttcctcagacagatcatggtcttcggaaagccaagaaaccaaaaaagaaa
actaagaagagaagacacaagtcgaacagtcccgagagcgagacagaccctgaggagaaa
gctgccaaggagagtgatgagaaagaaccagaacaggacaaggacagggacctccggcgg
gcagagctccctaatcgctccccagcctttggaatcaaaaaggagaagacgggctgggac
acgtcggaaagcgagctgagcgagggtgagctggaaagacggcggcggacactcttgcag
cagctggacgaccaccagtga
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