Oryx dammah (scimitar-horned oryx): 120858210
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Entry
120858210 CDS
T07255
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04360
Axon guidance
oda04724
Glutamatergic synapse
oda04726
Serotonergic synapse
oda04929
GnRH secretion
oda04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
120858210 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
120858210 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
120858210 (TRPC1)
04726 Serotonergic synapse
120858210 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
120858210 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oda04040
]
120858210 (TRPC1)
Ion channels [BR:
oda04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120858210 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
120858210
NCBI-ProteinID:
XP_040090070
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MMAALYPSTDLSGASSSSLPSSPSSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGD
YYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSADALLVAID
SEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLL
KQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFE
LSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSNDEPLDKRG
LLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGI
FWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPA
LERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNK
FHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQMILMNTYVIFPQ
ISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQQSNDTFHSF
IGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHK
SFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICSHTS
KGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQD
LSKFRNEIRDLLGFRTSKYAMFYPRN
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccctgtacccgagcacggacctctcgggcgcctcctcctcctccctgcct
tcttccccatcctcctcttcgtcgccaaacgaggtgatggcgctgaaggatgtgcgggag
gtgaaggaggagaataccttgaatgagaagcttttcttgctggcgtgcgacaagggtgac
tattatatggttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgc
gtagatgtgcttgggagaaatgctgttaccataactattgaaaacgagaacttggatata
ctgcagcttcttttggactacggttgccagtccgcagatgcacttttggtggcaatcgac
tctgaagtagtgggagctgttgatatactacttaatcatcgaccaaaacgatcatcaaga
ccaactatagtaaaactaatggagagaattcagaatcccgagtattcaacaactatggat
gttgcacctgtcattttagctgctcatcgtaacaactatgaaattcttacaatgctgtta
aaacaggatgtatctctgcctaagccccatgctgttggctgtgaatgtacattgtgttct
gcaaaaaacaaaaaggacagcctccgacattccaggtttcgtcttgatatatatcgctgc
ttggccagtccagctctaataatgttaacagaggaggatccaattctgagagcatttgaa
cttagtgctgatttaaaagaactaagcctcgtggaggtggaattcagaaatgattatgag
gaactagcccggcaatgtaaaatgtttgctaaagatttgcttgcccaagcccggaattcg
cgtgaattagaagttatcctaaaccatacatccaatgacgagcctcttgacaaacgggga
ttattagaagaaagaatgaacttaagtcgtctaaaacttgctatcaaatataaccaaaag
gagtttgtttcccagtccaactgtcagcagttcctgaacactgtttggtttggacagatg
tcaggttaccgtcgtaagcctacctgtaagaagataatgactgttttgacagttggcatc
ttttggccagttttgtcactttgttatttgatagctccaaaatctcagtttggcagaatt
attcacacacctttcatgaaatttattattcatggagcatcatatttcacattcctactg
ttactaaacctatactctcttgtctacaatgaggataagaaaaacacaatggggccagcc
cttgaaagaatagactatctccttatactgtggattattggaatgatatggtcagacatt
aaaagactctggtatgaagggttggaagactttttagaagaatctcgtaatcagctcagt
tttgtcatgaattcactttatttggcaacctttgccctcaaagtggttgctcacaacaag
tttcatgattttgcggatcggaaggactgggatgcgttccaccctaccctggtggcagag
ggactttttgcatttgccaacgtcctgagttatcttcgtctcttttttatgtatacaaca
agttctatcttgggtccgttacagatgattttaatgaacacctatgtaatatttccacag
atttcaatgggacagatgttacaagattttggaaaatttcttggaatgtttcttcttgtt
ctgttttctttcacaattgggctgacacaactgtatgataaaggctacactccaaaagaa
cagaaggactgtgtaggcatattctgtgaacagcaaagcaatgataccttccattcgttc
atcggcacttgctttgctttgttctggtatattttctccttagcacatgtggcaatcttt
gtcacaagatttagctatggagaagaattacagtccttcgtcggagctgttattgttggg
acgtacaatgttgtggttgtgatagtgcttaccaagctgctggtggcaatgcttcataaa
agttttcagttgatagcaaatcatgaagacaaagaatggaagtttgctcgagcaaaactg
tggcttagctactttgatgacaagtgtacattgcccccacctttcaacatcattccttca
ccaaagactatctgctatatgattagtagcctgagtaagtggatttgctcccatacatct
aaaggcaaggttaagcggcagaacagcttgaaggaatggagaaatttgaaacaaaagaga
gatgaaaactaccaaaaggtgatgtgctgtttggtgcatcgctacttgacttccatgagg
cagaagatgcagagcacagaccaggcaactgtggaaaatctaaatgaactgcgccaggac
ctgtcaaaattccgaaatgaaataagggatttacttggctttcggacttcaaaatatgcc
atgttttatccaagaaattag
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