Oryx dammah (scimitar-horned oryx): 120858938
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Entry
120858938 CDS
T07255
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oda03000
]
120858938 (SOX5)
Transcription factors [BR:
oda03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120858938 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
120858938
NCBI-ProteinID:
XP_040091285
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHEVDGN
KVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTTLGTPERRKGSLADVVDTLKQRKMEELI
KNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQ
LLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQL
PPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGP
LQLQQLYAAQLAAMQVSPGGKLPGVSQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPL
NLSAKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPASLASPSARVSTIGYLNDHDA
VTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEE
GKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKIL
QAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLV
DGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEH
SSVSSSPEPGMPVIQSTYGVKGEEPHIKEEIQAEDINGEIYDEYDEEEDDPDVDYGSDSE
NHIAGQAN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcttactgaccctgatttacctcaggagtttgaaaggatgtcttccaagcgaccagcc
tctccgtatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggaa
gaagaggagagtgacgggctcccagcctttcaccttcccttgcatgaagttgatggcaat
aaagttatgtcttcatttgccccacacaactcatctacctcacctcagaaggcagaagaa
ggtgggagacagagtggcgagtccttgtctagtacaaccctgggaactcctgaaaggcgc
aaaggcagcttagctgatgttgttgacaccttgaaacagaggaaaatggaagagctcatc
aaaaatgagccagaagaaacccccagtattgaaaagctactctcaaaagactggaaagac
aagcttcttgcaatgggatcagggaactttggtgaaataaaagggactcccgaaagccta
gctgagaaggagaggcagctcatgggtatgatcaatcagctaaccagtctgcgagagcag
ctgctggctgcccatgatgagcagaagaaactggctgcgtctcagattgagaaacagcgc
cagcaaatggagctggccaagcagcagcaagaacagatcgcaagacaacagcagcagctt
ctgcagcaacaacacaaaatcaatttgcttcagcagcagatccaggttcaaggtcaactg
ccgccattaatgattcctgtattccctcctgatcaacggacactggctgcagctgcccag
caaggattcctccttcctccaggcttcagctataaggctggatgtagtgacccttaccct
gtacagctgatcccaactaccatggcagctgcagccgcggcaacaccaggcttaggccca
ctccaactgcagcagttatatgctgcccagctagctgcaatgcaggtatctccaggagga
aagctcccaggcgtatcccaaggcaaccttggtgctgctgtatctcctaccagcattcac
acagacaagagcacaaacagcccaccacccaaaagcaaggatgaagtggcacagccactg
aacctatcagctaaacccaagacctctgatggcaaatcacccacatcacccacctctccc
catatgccagctctgagaataaacagtggggcaggccccctcaaagcctctgtcccagca
tcattagctagcccttcagccagagttagcacaataggttatttaaatgaccatgatgct
gtcaccaaggcaatccaagaagctcggcagatgaaggagcagctccggcgggaacagcag
gtgcttgacgggaaggtggctgttgtgaatagtctaggtctcaataactgccggacagaa
aaggaaaaaacaacactggagagtctgactcagcaactggcagtcaaacagaatgaagaa
ggaaaatttagccatgccatgatggatttcaatatgagtggagattctgatggaagtgct
ggagtctcagaatcaagaatttatagagaatccagggggcgtggtagcaatgaaccccac
ataaaacgtccaatgaatgccttcatggtgtgggctaaagatgaacgaaggaaaatcctt
caagcctttcctgacatgcacaactccaacatcagcaagatactgggatctcgctggaaa
gctatgacaaacctagagaaacagccatactacgaggagcaagcccgtctcagcaagcag
cacctggagaagtaccctgactacaagtacaagcccaggccgaagcgcacctgcctggtg
gatggcaaaaagctgcgcattggggaatacaaggccatcatgcgaaaccggcggcaggaa
atgcggcagtacttcaatgttgggcaacaagcacagatccccatcgcgacggctggcgtc
gtgtacccaggagccatcgccatggctgggatgccctcccctcacctgccctcggagcac
tccagcgtgtccagcagcccggagcccggcatgcctgttatccagagcacgtatggtgtg
aaaggagaggagccacacatcaaagaggagatccaggctgaggacatcaacggagaaatt
tatgatgagtacgacgaggaagaggatgatccggatgtagattatgggagtgacagtgaa
aaccatattgccggacaagccaactga
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