Oryx dammah (scimitar-horned oryx): 120860168
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Entry
120860168 CDS
T07255
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oda01002
]
120860168
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oda04121
]
120860168
Enzymes [BR:
oda01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120860168
Peptidases and inhibitors [BR:
oda01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120860168
Ubiquitin system [BR:
oda04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120860168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
120860168
NCBI-ProteinID:
XP_040091895
LinkDB
All DBs
Position
Unknown
AA seq
2552 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPFHNQTSSPDSSNENSPASPPDEQGQGDAPPQHE
DEEPAFPHADLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFR
DGLTVSFTKILMDEAVSGWKFEIHRCIINNIHRLVELCVAKLSQDWFPLLELLAMALNPH
CKFHIYNGTRPCESVSTSAQSPEDELFAHCSDPRSPKGWLVDLINKFGILNGFQILHDRF
INGSALNVQIIAALIKPFGQCYEFLNQHTVKKYFVPIIEIVPQFLENLTDEELKKEAKNE
TKNDALSMIIKSLKNLASRIPDQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINKV
ISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFVI
KEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASK
KQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCS
QDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQSQRSPHVFYRHD
LISQLQHNHALVTLVAENLATYMDSTRLYARDHEDYDPQTVRLGSRYSHVQEVQERLNFL
RFLLKDGQLWLCAPQAKQIWKCLAENAVYVCDREACFKWYSKLMGDEPDLDPDINKEFFE
SNVLQLDPFLLTENGMKCFERFFKAVNCREGKLVTKRRAYMMDDLELIGLDYLWRVVIQS
NDDIASRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLYVLDGDKDTIN
CARQEAVRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSLIVRFPNHGRQVDD
LDIWSHTNDTVGSVRRCILNRIKANVAHTKIELFVGGELIDSEDDRKLIGQLNIKDKSII
TAKLTQVSCNMPSSPDSSSDSSTGSPGNHSNRYSDGPKQEVESCLPGVIMSQHPRYISFL
WQVADLGSNLNIPPLRDGARILMKLMPMDSTTVGKLRALCLDQAKLGENNLGPSLDSLFF
GPSASRVLYLTEVIYALLMPADTPLADDSCDFQVHFLKSGGLSLVLSMLTKNNFLPNTDM
ETRRGAYFSGLKIAKLLLTAIGYGHVRAVAEACQPVVDGADPITPINQVTHDQAVVLQNA
LQSIPNPSSECILRNVSIRLAQQISEEASRYMPDICVIRAIQKITWASGCGTLELVFSPN
EEITKIYEMTSSLSHKPDVEDEQVCCEALEVMTLCFALVPTALDALNKEKAWQTFIIDLL
LHCPSKIVRQLAQEQFFLMCTRCCMGHRPLLFLITLLFSILGSTARERGKHSGDYFTLLR
HLLNYAFNNNINVPNAEVLLNNEIDWLKRIRDNVKSRGEIGVEEPILEGHLGVTKELLAF
QTPEKKYHIGCEKGGANLVKELIDDFIFPASKVYLQCMRNGELPAEQAIPVCSSPATINA
GFELLVALAVGCVKNLKQIVDCLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFVGLK
NAGATCYMNSVIQQLYMIPSIRNSILAIEGTGSDIDDDMFGEEKQDSESNVDPRDDVFGY
PHQFEDKPALNKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYIPRGFWKQFRLWGEPINL
REQHDALEFFNSLVDSLDEALKALGHPAMLSQVLGGSFADQKICQGCPHRYECEESFTTL
NVDIRNHQNLLDSLEQYIKGDLLEGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRF
DYDWERECAIKFNDYFEFPRELDMEPYTVPGVAKLEGANVNPEGQLTKQNEQSGSDTTGN
TKYRLVGVLVHSGQASGGHYYSYIIQRNGRDGERNRWYKFDDGDVTECKMDDDEEMKNQC
FGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDQEDEMIRYISELTITKPHQI
MSPAIERSVRKQNVQFMHNRMQYSLEYFQFVKKLLTCNGIYLSPAPGQDHLLPEAEEITM
ISIQLAARFLFTTGFHTKKIVRGPASDWYDALCILLRHSKNVRFWFAHNVLFSVSNRFSE
YLLECPSAEVRGVFAKLIVFVAHFSLQDGPCPSSFTSPGPSSQACDNLSLSDHLLRAVLN
LLRREVSEHGRHLQQYFSLFVMYANLGMAEKTQLLKLSVPATFMLVSLDEGPGPPIKYQY
AELGKLYSVVSQLIRCCNVSSRMQSSINGNPPLPNPFGDPNISQPIMPIQQNVADILFVR
TSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQ
ILLIEDSWQAHRIHNALKGIPDDRDGLFDTIQRSKTHYQKRAYQCIKCMVTLFSNCPVAY
QILQGNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHS
ARMTLAKACELCPEEEPDDQEAPDEHESSPPEDAPLYPHSSGSHYQQNNHIHGQPYTGPA
VHHLNNHQKTAQQQEENCEGNEEVSSSEIKDQ
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atgacagccactactcgtggctctccggtaggagggaatgacagccagggccaggctcct
gatggacagtctcagccccccttccataatcagacttcatcacctgattcttccaatgag
aattccccagcaagtcctccagatgaacaaggtcaaggtgatgctccacctcaacatgaa
gatgaggaacctgcatttcctcatgctgacctggcaaagttggatgacatgatcaaccga
cctcgttgggtggttccagttttgccaaaaggggaattagaagtgcttctagaagctgct
attgatcttagtaaaaaaggtctcgatgttaaaagtgaggcatgtcaacgttttttccga
gatgggctaacagtatctttcactaaaattcttatggatgaagcagtgagtggctggaag
tttgaaattcatagatgcattattaacaatattcatcgcctagtggaactttgtgtggcc
aagttgtcccaagactggtttccacttctagaacttctcgccatggccttaaatcctcat
tgcaaatttcatatctacaacggtacacgtccttgtgaatcagtttccacaagtgctcag
tcacctgaagatgaattatttgctcattgctcagatcctcgatcaccaaaaggttggcta
gtggatctcatcaataaatttggcatattaaatgggttccagattttgcatgatcgtttt
attaatggatcagcattaaatgttcagataattgcagctcttattaaaccatttggacag
tgctatgagtttctcaatcaacatacagtgaaaaagtacttcgttccaattatagaaata
gttccacaatttttagaaaatttaactgatgaagagctgaaaaaagaagcaaagaatgaa
actaaaaatgatgccctttcaatgattattaagtctttgaagaatttagcttcaaggatt
ccagaccaagaagaaactgtaaaaaatttagaaatttttaggttgaaaatgatactcaga
ttgttgcaaatttcttcttttaatgggaagatgaatgccttgaatgaaattaacaaggtg
atttctagtgtatcatattatactcatcggcatggtaatcctgaagaggaggaatggctg
acagctgaaagaatggcagaatggatacagcaaaacaatatcttatccatagtcttgaga
gatagtcttcatcaacctcagtatgtagaaaagctagagaagattcttcgttttgtgatt
aaagaaaaagctcttacgttacaagatcttgataatatctgggcagcacaggcagggaaa
catgaagccattgtaaagaatgtacatgaccttctggcaaagttggcttgggatttttct
cctgaacaacttgatcatctttttgattgctttaaggcaagttggacaaatgcaagtaaa
aagcaacgtgaaaagctgctagagctgatacgacgtcttgcagaagatgataaagatggt
gtgatggcacacaaagtgttgaaccttctttggaatctggctcatagtgacgatgtacct
gtagacatcatggacctagctctcagtgcccacataaaaatactagattatagttgttcc
caggatcgagacacacaaaagatccagtggatagatcgctttattgaagaacttcgcaca
aatgacaaatgggtaattcctgcgctgaaacaaataagagaaatttgtagtttgtttggg
gaagcacctcagaatttaagtcaatctcagcgaagtccccatgtattttatcgtcatgat
ttaatcagtcagcttcagcacaatcatgccttagttactttggtagcagaaaaccttgca
acttacatggatagcacacgactatatgctagagaccatgaagactatgacccacaaact
gtgaggcttggaagtagatacagtcatgttcaagaagttcaagaacggcttaacttcctt
aggtttttattaaaggatggccagctgtggctttgtgcgcctcaggcaaagcaaatatgg
aaatgcttagcagagaatgcagtttatgtttgtgatcgtgaagcctgttttaagtggtat
tccaagttaatgggggatgaaccagacttagatcctgatattaataaggaattctttgaa
agtaatgtacttcaacttgatcctttcctgttaactgaaaatggaatgaaatgttttgaa
cgattcttcaaagctgttaattgtcgagaagggaaactagtaacaaaaagaagagcctat
atgatggatgatttggaactaataggattagactacctttggagagtcgtaattcagagt
aatgatgatattgccagcagagctatagatctccttaaagaaatatatacaaatcttggc
cccagattacaggtcaatcaggtggttatccatgaagacttcattcagtcttgctttgat
cgtttgaaagcttcatatgatacattgtatgttttggatggtgacaaagacaccattaac
tgtgcaagacaggaagctgttagaatggttcgagtattgactgttttaagggaatacata
aatgaatgtgatagtgattatcatgaggaaagaaccattctacctatgtcaagagcattc
cgtggtaaacatctctctctcatagttcggtttccaaaccacggcagacaggttgatgat
ttggatatatggtctcatacaaatgatactgttggttcagtacgacgatgtattctcaat
cgtattaaggcaaatgtagcccatacaaaaattgaactctttgtgggtggtgaattaata
gattctgaagatgacagaaagctaattggacagctaaacataaaagacaaatcgataatt
acggccaaacttacacaagtaagttgcaatatgccttccagccctgacagttcttctgat
tcctcaactggatctcctgggaaccatagtaatcgttatagtgatggccctaaacaagaa
gtggaaagttgtttgcctggggtgataatgtcacaacatcccaggtacatctctttcctt
tggcaagttgctgacttaggtagcaatctgaatataccacctcttagagatggagccaga
atacttatgaaacttatgccaatggatagcacaacagtaggaaaactaagagctctttgt
ttggaccaggcaaaacttggagaaaataaccttggaccatctcttgattcacttttcttt
ggtccttctgcttcccgagtcctgtatctaacagaggttatttatgccctattaatgcct
gctgatacgcctctggcagatgattcttgtgactttcaggttcacttcttgaagagtggt
ggcttatcccttgtactgagtatgctaacaaaaaataacttcctgccaaatacagatatg
gaaacacgaaggggtgcatacttcagtggtcttaaaatagccaaactcttgttaactgca
ataggctatggccatgttagagctgtagcagaagcttgtcagccagttgtagatggtgca
gatcccataacaccgattaaccaagttactcatgatcaagcagtggtgctacaaaatgct
cttcagagcattcctaacccatcatctgagtgtattcttagaaatgtatcaatacgtctt
gctcaacaaatatctgaagaggcttcaagatacatgcctgatatatgtgttattagagct
atacagaaaatcacctgggcatcaggatgtgggacattagagctagtatttagcccaaat
gaagaaattactaaaatttacgagatgaccagcagtctaagccataagccagacgtggaa
gatgaacaggtttgctgtgaagcattggaagtgatgactttatgttttgctctagttcca
acagccctggatgcacttaataaagaaaaagcttggcagacatttatcattgacttatta
ttgcattgtcccagcaaaattgttcgtcagttggcacaggaacagttttttttaatgtgc
accaggtgttgcatgggacacagacctctgcttttcctcattactttgctctttagcatt
ttggggagcacagcaagagagagaggtaaacattcaggtgactatttcactcttcttcgg
caccttctaaattatgctttcaacaataatattaatgtgcccaatgctgaagttcttctc
aacaatgaaattgactggctcaaaagaattagggataatgttaaaagtagaggtgaaata
ggtgttgaagagcctatcttggaaggccaccttggggtaacaaaagagttattggccttt
caaacacctgagaaaaagtatcatattggttgtgaaaaaggaggtgctaatcttgttaaa
gaattaatagatgatttcatctttcctgcctccaaagtttacctgcagtgtatgagaaac
ggagaattaccagctgaacaggctatcccggtctgtagttcaccagctaccatcaatgct
gggtttgaactacttgtagcattagctgttggctgtgtaaagaatctcaaacagatagta
gactgtttgactgaaatgtattacataggaacagcaataactacttgtgaagcacttact
gagtgggaatatctaccacctgttggaccccgcccaccaaaaggatttgtgggactcaaa
aatgctggtgctacttgttatatgaattctgtgatccagcagttatacatgattccttcc
atcaggaatagtattcttgcaattgaaggcacaggtagtgatatagatgatgatatgttt
ggtgaggagaagcaggacagtgaaagtaatgttgatccccgagatgatgtatttggatac
cctcatcaatttgaagacaaaccagcattaaataaaacagaagataggaaagagtacaat
attggtgttctgagacaccttcaggttatctttggtcatttagctgcttcccggctacaa
tactatatccccagaggattttggaaacagttcagactttggggtgagcctattaatctt
cgtgaacaacatgatgccttagagttttttaattctttggtggatagtttagatgaagct
ttaaaagctttaggacatccagctatgctaagtcaagtcctgggaggttcctttgctgat
cagaagatttgccagggctgcccacatagatatgagtgtgaagaatcttttacaactctg
aatgtagatattagaaatcaccaaaaccttcttgattctttggaacagtatatcaaaggc
gatttattggaaggtgcaaatgcttatcgttgtgaaaaatgtgataaaaaggttgataca
gtaaaacggttgctaattaaaaaattgcctcctgttcttgctattcaattgaaacgtttt
gactatgactgggaaagagaatgtgcaattaaattcaatgattattttgaatttccacga
gagctggacatggaaccttatacagtaccaggtgttgcaaagctggaaggagctaatgta
aacccagagggtcagttgacgaaacagaatgaacagtctggaagtgatacaactggaaac
acaaaatacagacttgtgggggtgcttgtacacagtggtcaagcaagtggtggacattat
tactcctacatcattcagaggaatggcagagatggtgagagaaatcgctggtataaattt
gatgatggagatgtaacagagtgtaaaatggatgatgatgaagaaatgaaaaatcagtgt
tttggtggagagtacatgggagaagtatttgaccatatgatgaaacgcatgtcgtacaga
aggcagaaaagatggtggaatgcttatatactgttttatgaacgaatggacacaatagac
caagaagatgaaatgataagatacatatcagagctaactatcacaaaaccccatcaaatt
atgtcaccagccattgagagaagtgtacgaaaacaaaatgtgcaattcatgcataaccga
atgcagtacagtttagaatattttcagtttgtgaaaaaattgcttacatgtaatggtatt
tacttaagccctgctccaggacaagatcacttattgcctgaagccgaagaaattactatg
attagcattcagcttgcagctaggttcctctttaccactggatttcacacaaagaaaata
gtccgtggccctgccagtgattggtatgatgcattgtgcattttactccgtcacagtaag
aacgtacgtttttggtttgctcataatgtgcttttcagtgtttcaaatcgtttctctgaa
taccttctggagtgccctagtgctgaagtgaggggtgtatttgcaaaacttatagtattt
gttgcacatttttctttgcaagatgggccttgtccttcatctttcacatctccaggacct
tctagtcaggcatgtgacaatttaagtttgagtgatcatctactaagagcagtgttaaat
ctcctgagaagggaagtgtctgaacatggtcgtcatttacagcaatatttcagtctgttt
gtcatgtatgccaacttaggtatggcagaaaagacacagcttctgaaattgagtgtacct
gctacctttatgcttgtgtctttagatgaaggaccaggtcctccaatcaaatatcagtat
gctgaattaggcaagttgtactcagtagtgtctcaactgatccggtgttgcaatgtctca
tcgagaatgcagtcttcaatcaatggtaatccccctcttcccaatccttttggtgaccct
aatatatcacagcctataatgccaattcagcagaatgtggcagacattttatttgtgaga
acaagttatgtgaagaaaattattgaagactgcagtaactcagaggaaaccatcaaatta
cttcgtttttgctgctgggagaatcctcagttctcgtctacagtcctcagtgaactactc
tggcaggttgcatattcatacacctatgaacttcggccatatttggatctacttctacag
attttactgatagaggattcctggcaggctcacagaattcataatgcacttaaaggaatc
ccagatgatcgagatggattgtttgatactatccagcgctctaagactcactatcaaaaa
agagcataccagtgtataaaatgtatggtgactctctttagcaattgtcctgttgcttac
cagatattacagggcaatggagatcttaaaagaaagtggacttgggcagtagaatggctt
ggagatgaacttgaaagaagaccatatactggcaatccacaatacacttataataattgg
tctcctccagttcagagcaatgaaacatcaaatggttatttcttagagagatcacatagt
gctaggatgacactggcaaaagcttgtgaactctgtccagaggaggagccagatgaccaa
gaagccccagatgagcatgaatcatctccaccagaagatgctccattatatcctcattca
tctggatctcactatcaacagaataatcacatacatggacagccatatacaggaccagca
gtacatcacttgaacaaccatcagaaaactgcccagcagcaagaggaaaactgtgaaggc
aatgaagaagtatcctcatctgaaataaaggatcagtga
DBGET
integrated database retrieval system
