Oryx dammah (scimitar-horned oryx): 120860171
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Entry
120860171 CDS
T07255
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04622
RIG-I-like receptor signaling pathway
oda05161
Hepatitis B
oda05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120860171
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
120860171
09172 Infectious disease: viral
05161 Hepatitis B
120860171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120860171
03041 Spliceosome [BR:
oda03041
]
120860171
03036 Chromosome and associated proteins [BR:
oda03036
]
120860171
Enzymes [BR:
oda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120860171
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120860171
mRNA cycle factors
Common to processing body (P body) and stress granule
120860171
Spliceosome [BR:
oda03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120860171
Chromosome and associated proteins [BR:
oda03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120860171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120860171
NCBI-ProteinID:
XP_040091899
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MSHEAVKNVQEVDQQLADLNLNSDNNQSGGGSTASKGRYIPPHLRNREASKGFYGKDSSG
WSCSKEKDAYSSFGSRGSRGKHSYFSDRGSGSRGRFDDRGRNDCEGIGSRDRTGFGRYER
SGHSRWYDKSDDDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEVTGNNCPPHIES
FSDIAMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQ
IYTDGPGEALKAVKEIGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVLPCVVY
GGADIGQQIRDLERGCHLLVATPGRLVDMMERGRIGLDFCKYLVLDEADRMLDMGFEPQI
RRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVW
VEEADKRSFLLDILNATGTDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDRE
EALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLA
TSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKSSSRGRSKRFSGGFGARDYR
QSSSSGSSSYSSGRASSSRSGGGGHGSSRGFGGGGYGGFYSSEGYGGNYSSQGVDWWGN
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacgaggcggtgaaaaacgtgcaggaggtggatcagcagttggctgatctaaac
ctgaactctgataataatcagagtggaggaggaagtacagctagcaaagggcgctatata
cctcctcacttaaggaatagggaagcatctaaaggattttatggtaaagacagttcaggg
tggagctgtagtaaagaaaaggatgcctacagcagttttggatctcgaggttcaagagga
aaacacagttacttcagtgatcgaggaagtggatcaaggggaaggtttgatgatcgtggg
cggaatgactgtgaaggtattggcagtcgtgacagaactggctttggcagatacgagcgt
agtggacacagtcgttggtatgacaagtcagatgatgatgactggtcaaaaccacttcca
ccaagtgaacgcttggagcaggagctcttttctggaggaaacactgggattaactttgag
aaatatgatgatataccagtagaggtaaccggcaataattgtcctccacacattgaaagt
ttcagcgatattgcaatgggagaaattattatgggaaacattgagcttactcgttacaca
cgtcctactccagtgcaaaaacatgccattcccattattaaagaaaaaagagacctgatg
gcttgtgcccaaacagggtctgggaaaactgcagcatttcttttgcccatcttgagtcag
atttatacagatggtccaggcgaggctttgaaagctgtgaaggaaattggaaggtatgga
cgccgtaaacagtatccaatctccttggttttagccccaacaagagagctggctgtacag
atctatgaggaagccaggaaattttcataccggtctcgagttcttccttgtgtggtatac
ggtggtgctgatattggtcaacagattcgagacttagaacgtggatgtcacttgttagtt
gctactccaggacgcctggtggatatgatggaaagaggaaggattgggttagatttctgc
aaatacttggtgttggatgaagctgatagaatgctggatatgggatttgaacctcaaata
cgtcgtatagttgaacaagacactatgccgccaaagggtgttcgccataccatgatgttt
agtgctacttttcctaaggaaattcagatgcttgctcgtgacttcttggatgaatatatc
tttctggccgtaggtagagttggctctacctctgagaacatcacacaaaaagtagtttgg
gtggaagaggcagacaaacggtcatttctgcttgatatcttaaatgcaacagggacggat
tcgttgactttagtttttgtggagaccaaaaaaggagctgattctttggaggatttctta
taccatgaaggatatgcttgtacaagtatccatggagaccgatcacagagagatagagag
gaagctcttcatcaattccgctcaggaaaaagcccaattctagtggctactgctgtggca
gcaagaggactagacatttcaaatgtgaaacatgtcatcaattttgatttgccaagtgat
attgaggaatatgtacatcggattggccgtacaggacgtgtaggaaaccttggtcttgcc
acctcatttttcaatgaaagaaatataaatatcacaaaagatttgttggatcttcttgtt
gaagccaaacaagaagtgccatcttggttggaaaacatggcttatgaacaccactataag
agtagcagtcgtggccgttctaagagattcagtggaggctttggtgcccgtgattatcga
caaagtagcagttctggcagctccagctatagtagtggtcgtgcaagcagcagccgcagt
ggtggaggtggtcatggcagcagcagaggatttggtggaggtggctatggaggcttctac
agtagtgaaggatatggaggaaattacagctctcagggggttgactggtggggcaactga
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