Oryx dammah (scimitar-horned oryx): 120860506
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Entry
120860506 CDS
T07255
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oda03016
]
120860506
03036 Chromosome and associated proteins [BR:
oda03036
]
120860506
Enzymes [BR:
oda01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
120860506
Transfer RNA biogenesis [BR:
oda03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120860506
Chromosome and associated proteins [BR:
oda03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120860506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
120860506
NCBI-ProteinID:
XP_040092272
LinkDB
All DBs
Position
Unknown
AA seq
1611 aa
AA seq
DB search
MERVLADALLSQSRDPRVLLGALCRGEVSAERVETLCFLLQRLEDEEARGGGAGALPEAA
REVAAGYLVPLLRGLRGCPAGGAEDPGPAARQRRRVLRAAGAALRSCARLAGGPQLAAAL
AEEALCDLLNAGPAPGLEGAAEAAVEVLAAVGPCLRPREDAPLLERVARAALALALGGDK
AGPSPDAAALVAGRLLPALGRCGGAALRAVWDELVAPGVSEGPGRVGSQLLILSALAEKL
LPEPGADSVPAAREAGLDARRCWRFWSAVQAGLAWSEDALTRKRARYLLQRAVEVSAELG
TDCACAPGEGTGPSLFWWSEKKKDELLKFWENYILIMETLEGNQIHVIKPVLPKLNSLFE
YAVSEENGCWLFHPSWHLCIYKRMFESENKILTKEGVTHFLELYETRILPFSPEISEFII
GPLMDALSESSLYSRSPGQLIGSVSPLGLKLQKFLVTYISFLPEEIKSSFLLKFIQKMTS
RHWCAVPILFLSKALANVPRCKALGIEGLLALRDVLQCTMITHQILLRGAAQCYLLQTAM
NLVDVEKVSLSDISTFLMSVRQEESLGRGTSLWMELCDWLRINESYFKQSSTCSSIGLHE
TSSLNAYVRNLVQEYIRSPAWEGGENSCMPDWFEAKLVAMMVLLATDVERMKSQYSEKRR
TQNVLRIFLDPLLDALVKFGTNAYMPLLKTDRCLQLLLKLLHTCLLKGSGTRDDEVFTLL
QNFIMSTTESISEFILRRLTMNELSTVSDLDRCHLYLMVLTELINLNLNVGWKRGNPIWR
VISPLKNASIRHLQEMDHGQEPTLGRQMQRAASMAALAMVCEVLSQKPELQLDSLDAGPP
ETLISSLQLNQTLQKPHTEEASSFFEESSSSQGWGKIVAQYIHDQWVCLSFLLRKCHTLI
PASEGEVLEPTLPAVPMAVRTLQSALEALTVLPSEQVLPVFHCMKILVPKLLTTSESLCI
ESFDMAWKIIASLSNTQLIFWSNFKAFVQFVFDPKVLTIAAKIKGQAYFKIKEIMYRIIE
MSAIKTGVFNILISYCCRSWVVSASNVSLSIAKNYSELVLEACIFGTVFRRDQRLVQDVQ
TFIENLGHECAANVVIENTKREDHYVRICAVKFLCLLDGSNMSHKLFMEDLAIKLLDKDE
LVSKSRTRYYVNSQQHRVKNRIWQILLVLFPKFDQNFLNTIIDKIFQAGFINNQASIKYF
IEWIIILILHKFPQFLPKFWNCFSYGEENLKTSICTFLSVLSHLDIITENILEKKLILKQ
ALVIVLQWCFNHNFSIRLYALVALKKIWSMCKGLHIEELEALTSVIESSLSQVENMHGAG
SVKKNWQRIQEHFFFTAFHPLKDYCLETIFYILPRLSGLTEDEWIAIGKFTRFTDIPLDA
GFQWYLSTTQLCQLKPGDWSQQDVGSNSGEADNQSEWTDVQKKIIPWKNHVPDLDLELVF
QDRAAKLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGAAALVLGNLQCVRDKQFQHLSV
SAEQWLPLVEVKPPQLIDYLQQKKAEGYTIVGVEQTAKSLDLTRYCFPEKSLLLLGNERE
GIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLLKQGVSTA
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggtgctggcggatgcgctgctctcgcagagccgggacccccgggtcctgctt
ggggcgctgtgccgcggggaggtatctgcggagcgcgtggagaccctgtgttttcttctg
cagcgactggaagatgaggaagcgcgcggcggcggcgcgggcgcgctcccggaggcggcg
cgcgaggtcgccgccgggtatctggtgccgctgctgcggggcctgcgcgggtgccccgcg
ggcggcgcggaggaccctggtcccgcggcccgccagcgccggcgtgtgctgagggcggca
ggcgctgccctgcgctcgtgcgcccgcctagccgggggcccgcagctggcggccgcgctg
gccgaggaggcgctgtgcgacctgctcaacgcggggcccgcgccgggcctcgaaggggcc
gccgaggcggccgtggaggtgctggcggccgtggggccctgcctgcggcctcgcgaggac
gcgcccctgctggagcgagtggcgcgggcagctctcgcgctggcgctgggtggggacaag
gcggggccgtccccggacgctgcggcgctggttgccgggcggctgctgccggctctgggc
cggtgcggcggggcggcgctgcgggctgtgtgggacgagctggttgcacccggggtgtct
gaggggccgggccgcgtcgggtcgcagctgctgattctgagcgccctcgccgagaagcta
ctgccagagcccggcgcagacagcgtgcctgccgcgcgcgaggcgggcctggacgcccgg
cgctgctggcgcttctggagcgcggtgcaggccgggctggcctggtctgaggacgccctg
acgcgcaagcgggcgcgctacctgctgcagcgggctgtggaggtgtcggcggaactgggg
accgactgcgcctgcgcccccggcgaaggaaccggcccaagtctgttttggtggtctgag
aagaaaaaagatgagcttctaaagttttgggaaaactatattttaattatggaaactctt
gaaggaaatcagatacatgttataaagccagttttaccaaagctaaacagtctgtttgaa
tatgcagtgtcagaggaaaatggatgctggctctttcacccatcctggcatctgtgcatt
tataaaagaatgtttgaaagtgaaaataaaatcctgactaaagaaggtgttacccatttt
ttggaactgtatgaaacaaggattcttccattttcaccagaaatttctgagtttatcatt
ggaccattaatggatgcactttcagagagctctctatacagcaggtccccaggccagctg
ataggaagtgtttctccgctgggactgaaattacagaagtttttagtcacttatatttct
tttcttccagaagaaataaagagtagtttcctgttaaaatttattcagaagatgacaagc
agacattggtgtgctgttcccattttgtttctatctaaggctttggcaaacgtcccaagg
tgtaaagccctgggtatagaaggacttcttgccctcagggatgtgctgcagtgcaccatg
atcacacatcagatcctgctgagaggggcggcgcagtgctatctcctccagaccgccatg
aatctggtagacgtggagaaagtgtcactctctgacatctcaacttttctcatgtcagtg
agacaagaggagtcattaggaagaggaacttcactgtggatggagctctgtgattggttg
cgtattaatgaaagctatttcaagcaatcctcaacttgtagctccattggacttcacgag
acttcttctttaaatgcttatgtcaggaacctagtgcaagagtatattaggtcacctgcc
tgggaaggaggagaaaacagctgtatgcctgattggtttgaagctaagcttgttgctatg
atggtgttgctggccacagatgtagaaagaatgaagagtcaatatagtgaaaagcggagg
acacagaatgtattaaggatattcttagatcctctcctggatgcccttgtgaagtttggt
acaaatgcctacatgcccttgctgaaaactgacagatgcctgcagttgctgttgaagtta
ctgcacacttgcttgttgaaaggttccggtacccgagatgatgaggtatttactcttctt
cagaactttatcatgtctactacagagagcatttctgaatttattctcagacgacttact
atgaatgaactaagtactgtttcagatctggatcgttgccatttgtacctgatggtgtta
actgagcttataaatctcaacttgaatgttgggtggaaaagaggcaaccctatttggaga
gttatttctcctttgaaaaatgcatccattcggcatcttcaggaaatggaccatggacag
gagcccacactgggtagacagatgcagagagccgctagcatggctgccttggccatggtg
tgtgaggtcctcagccagaagccagagctacagctggactctctggatgcgggtccccca
gaaacgctcatctcatcactccagctcaatcagactctgcagaagccccacacggaggag
gcgagcagtttttttgaagagtcatcatcttcccaaggatgggggaaaatagttgcacag
tatattcatgatcagtgggtctgcctctctttcttgttgagaaaatgtcacacccttata
ccagcctcagagggtgaagttctggaacccactctacctgctgttccaatggcagtaagg
actttgcagtctgcgctagaagccctcacagttctgccttctgagcaagtcttacctgtg
ttccattgtatgaaaattttggttcccaagcttctgaccacctctgaatcactctgcata
gaatcttttgacatggcatggaaaatcatagcctctttaagcaacactcagctgatattc
tggtctaattttaaagcttttgttcagtttgtttttgatcccaaagttcttaccatcgct
gcaaaaatcaaaggccaggcatatttcaaaataaaagagattatgtacaggataattgaa
atgtctgctataaaaactggagtcttcaatatcctgataagttattgctgcagatcttgg
gtagtttctgcttccaatgtgtctttatcaattgctaaaaattacagtgaacttgtcctt
gaggcatgtatatttggaaccgtgtttcggcgtgatcaaagacttgttcaggatgtacag
acgttcatagaaaatcttggacatgagtgcgcagcaaatgttgttattgaaaataccaaa
agagaagaccattatgtgagaatttgtgctgtcaaattcctgtgtttattagatggctca
aatatgtctcataagctgtttatggaagatcttgcaatcaagctgttggataaagatgag
ttggtgtccaaatcaagaactcgatactatgtgaactctcaacaacacagggtgaaaaac
cgaatatggcagattctgcttgtacttttccccaaatttgatcagaatttcttgaataca
attattgacaagattttccaggctggcttcatcaataatcaggcatccataaaatatttt
atagaatggattattatactgattcttcataaattccctcaatttcttccgaagttctgg
aactgcttttcttatggtgaagaaaaccttaaaacaagcatttgtacatttttatcagtt
ttgtcacatttggacatcattactgaaaatatcctggaaaagaaactaattctgaagcaa
gcccttgttatcgtgctgcagtggtgcttcaaccacaatttcagcattcgactgtatgcg
ttagtcgctcttaagaaaatctggagcatgtgtaaggggttacacattgaagaacttgag
gctttaacttctgttattgaatccagtctgagtcaagtggaaaacatgcacggagcaggg
agcgtgaagaaaaactggcaacgcatccaggagcatttctttttcacagcgttccacccg
ctgaaggattactgtctggagacgatattctacatccttccacgcctctccggccttact
gaggatgaatggattgccattggtaaatttaccaggttcactgacattcctttagatgca
ggatttcagtggtacctttctacaactcaactgtgtcaactaaaaccaggtgactggtcc
cagcaggacgtaggttccaactcaggtgaagcagataaccagtcagagtggactgatgtt
cagaagaagattatcccgtggaagaaccatgttccagacttggacctggagctggtattt
caggatcgtgctgctaaacttggaaagtcaatcagcagactgattgtagtggcctcgctc
attgataagccaaccaatttaggagggctgtgccggacctgtgaggtgttcggggccgcg
gcgctggtattgggcaaccttcagtgtgtcagagacaagcagtttcagcacctcagtgtt
tcagcagaacagtggcttcctttagtggaggtaaaaccacctcagctgatcgattatctg
caacagaaaaaggcagaaggttacaccatcgtgggtgtggaacagactgccaaaagttta
gacctaacccggtactgcttccctgagaagtctttactcttgttgggcaacgaacgtgaa
gggattccagcgaatctgatccagcagctggacgtgtgcgtggagattcctcagcagggc
atcatccgctccctcaatgtccacgtgagtggggcgctgctgatctgggagtacaccagg
cagcagctgctgaagcagggggtctccacagcctga
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integrated database retrieval system
