Oryx dammah (scimitar-horned oryx): 120861572
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Entry
120861572 CDS
T07255
Name
(RefSeq) LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03030
DNA replication
oda03420
Nucleotide excision repair
oda03430
Mismatch repair
oda03440
Homologous recombination
oda03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120861572
03420 Nucleotide excision repair
120861572
03430 Mismatch repair
120861572
03440 Homologous recombination
120861572
03460 Fanconi anemia pathway
120861572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oda03000
]
120861572
03032 DNA replication proteins [BR:
oda03032
]
120861572
03400 DNA repair and recombination proteins [BR:
oda03400
]
120861572
Transcription factors [BR:
oda03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120861572
DNA replication proteins [BR:
oda03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
120861572
DNA repair and recombination proteins [BR:
oda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
120861572
MMR (mismatch excision repair)
120861572
DSBR (double strand breaks repair)
HR (homologous recombination)
120861572
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
120861572
NCBI-ProteinID:
XP_040093242
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MEVGAGVQAGFRNDRLLVSDGLNTLSSFMLATQLNPLVEEEQLSSNYICQINRFIVNTLK
GGRRAVILMEVEVLKSAEAFGSKIGNPVPYNEGHGQQPVVPPPVSAASPPTSRPQQQNGS
PGVASTASKAFGASKTFGKAGGTSQVNSSGGTQAKVVPIASLTQYQSKWTICARVTNKSQ
IRTWSNSRGEGKLFSIELVDESGEIRATALNEQADKFFPLIDVNKVYYFSKGTLKIANKQ
FTAVKNDYEMTFNNETSVMPCEDGRHLPTVQFDFTGIGDLESKSKDSLVDIIGICKNCED
VTKIIVKSNNREVSKRNIYLMDMSGKVVNATLWGDDADKFDGSRQPVMAIKGARVSDFGG
RSLSVLSSSTIIVNPDIPEAYKLRGRFDSEGQALDGISISDLKSGGAGRSNTNWKTLYEV
KSENLGQGDKPDYFSSVATVVYLRKENCMYQACPTQDCNKKVIDQQNGLYCCEKCDSEFP
NFKYRMILSVNIADFQENQWVTCFQESAEAILGQNTAYLGELKEKNEQAFEEVFQNANFX
SFTFKIRVKLETYNDESRIKATVVDVKPVDYKEYGRRLVMNIRRNAAM
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgggagcaggtgtacaagctggatttagaaacgacagactgcttgtgagtgat
ggattgaatactctatcttctttcatgttggcaacacagctgaaccctcttgttgaggaa
gagcaattgtctagcaactatatttgccagattaaccgatttattgtgaacacgctgaaa
ggtggaaggagagcggttattttgatggaggtagaagttttgaaatcagctgaagcattt
ggatcaaagattggcaatccagtaccttataatgaaggacatggacagcagccagtagtt
cctcctcctgtctcagcagccagtccaccaaccagcaggccccagcaacagaatgggagc
ccaggagtggcttccactgcctctaaggcttttggtgcctcaaagacatttggaaaagct
ggcggtaccagccaagtgaacagctctgggggaacacaggccaaagtggtacccattgcc
agcctcacccagtaccaatccaagtggactatctgtgctcgtgtcaccaacaaaagtcag
atccgcacctggagcaactcccgaggggaagggaagcttttctccatagaactggttgat
gagagtggtgaaatcagagcgactgctctcaatgagcaagcggacaagtttttccccctt
attgacgtgaacaaggtctattacttctctaaaggcaccctgaagatcgccaacaaacaa
ttcacagccgtcaaaaacgactacgagatgaccttcaacaatgagacttctgtcatgccc
tgtgaagacggtcgtcacttacccacagttcagtttgatttcacggggattggcgacctg
gagagcaaatctaaagactcacttgtggacataatcgggatctgcaagaactgtgaagat
gtcacaaaaatcatcgtgaagtctaacaacagagaagtctcgaagagaaatatctatctg
atggacatgtcagggaaggtggtgaacgctaccttgtggggagacgatgctgataaattt
gatggttctagacaacctgtgatggccatcaaaggagccagagtttctgattttggtgga
cggagcctctcagtactgtcttcaagcaccatcattgtgaaccctgacatcccagaggcc
tataagcttcgtggaaggtttgactcagaaggacaagccttagatggcatttccatctct
gatctaaagagtggaggagcaggtcggagcaacaccaactggaaaactttatatgaggtc
aagtcagagaacctgggccaaggcgacaagcctgactattttagctctgtggcaaccgtg
gtgtatcttcgcaaagagaactgtatgtaccaggcctgcccaactcaggattgtaacaag
aaagtgatcgaccagcagaacggattgtactgctgcgagaagtgtgacagtgaattcccc
aatttcaagtaccgcatgatcctgtcagtcaatattgccgattttcaagagaatcagtgg
gtcacatgtttccaggagtctgcagaggccatccttggacaaaacactgcttatctcggg
gaattaaaagagaagaacgagcaagcatttgaggaagttttccagaatgccaacttttga
tcttttacgttcaagatcagggtcaaactggagacctacaatgatgagtctcggattaag
gccacggtggtggatgtgaagcctgtggactacaaagaatacggcagaaggctggtcatg
aacatcaggaggaacgcggcgatgtga
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