Oryx dammah (scimitar-horned oryx): 120861927
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Entry
120861927 CDS
T07255
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
120861927 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oda03036
]
120861927 (SMARCAD1)
Chromosome and associated proteins [BR:
oda03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120861927 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
CUE
ERCC3_RAD25_C
TTC3_9th
Pox_D5
Motif
Other DBs
NCBI-GeneID:
120861927
NCBI-ProteinID:
XP_040093776
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MNLFNLDRFRFEKRNKIEEAPEATPQPSQPGPSSPISLSAEEENAEGEVSRAGTPDSDVT
EKTEDSSVPETPENDRKASISYFKNQRGIQYIDLSSDSEDVVSPNCSSTVQEKKFNKDTV
IIVSEPSEDEESQGLPTMATRNNNDISELEDLSELEDLKDAKLQTLKELFPQRSDSDLLK
LIDSTSTMDGAIAAALLMFGDAEGGGPRKRKLSSSSEPFEEDEFNDDQSMKKKRLDHGEE
SNESAESSTNWEKQESIVLKLQKEFPNFDKEELREVLKEHEWMYTEALESLKVFAEDQDM
QYASPSEFPNGKEVSSRSQNYTKNATKTKLKQKCSMKPQNGFNKKRKKNVFNPKRVIEDS
EYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITEL
RPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTG
NGGGWNTEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAY
LYQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSRYEEYN
VIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGT
PVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPF
ILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYMNLFNRLKKSINNLEKNTEMCNVMMQL
RKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYR
HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL
RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQ
AEDRCHRVGQTKEVLVIKLIGQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIAT
LLKTSMGL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacctggaccgttttcgctttgagaaaagaaataagattgaggaagcg
cccgaagcaacccctcaaccctcccagcctggcccttcttcaccaatttctcttagtgct
gaagaggagaatgctgaaggggaagttagcagggcaggcacccctgattcagatgtaact
gaaaaaacagaagattctagtgttccagaaactccagaaaatgacagaaaagcaagtata
tcatatttcaagaatcaaagagggattcaatacattgatttgtcttctgatagtgaagat
gttgtttccccaaattgctccagtacagttcaagagaaaaaattcaacaaagacacggtg
attatagtttctgagccatctgaagatgaagagtcccaaggccttcctaccatggccact
agaaacaacaatgatatttcagaactggaagacctttcggaattggaagaccttaaagat
gctaaacttcagaccctgaaggagctttttccacaaagaagtgacagtgatttacttaag
ttgattgactcaacaagcactatggatggagcaattgctgctgccttgctgatgtttggt
gatgcagaaggtggtggacccaggaaaagaaaattatcttcttcttcagagccatttgag
gaagatgaatttaatgatgatcaatctatgaaaaagaagagattggatcatggagaagag
tcaaatgaatctgcagagtctagcactaactgggaaaagcaggaaagtattgtgttgaaa
ttacaaaaggaatttcccaattttgataaagaggaattaagggaagtactcaaggaacac
gaatggatgtacacagaggctttagaatctttaaaagtatttgcagaagaccaagatatg
caatatgcttcaccgagtgagtttccaaatggaaaagaggtttcttcaagaagtcaaaat
tatactaaaaatgcaactaaaacaaaactgaaacagaaatgttccatgaaaccacaaaat
ggttttaacaagaaacgtaaaaaaaatgtatttaatcctaaaagagttattgaagactct
gaatatgattcaggttctgatgtcggtagttcgctagacgaggactatagtagtggtgaa
gaagtgatggaggatggctataaaggtaaaatcctccacttccttcaagatgcttcaatt
ggtgaacttactttgattcctcagtgttctcagaaaaaggctcagaagataacagaactc
cggccctttaatagttgggaagctctgttcacaaagatgtccaaaacgaatggcttatca
gaagatctgatatggcactgtaaaacactgattcaggaaagggatgtagttataaggctt
atgaacaaatgtgaagacatttcaaataaactgacaaaacaagttaccatgctcactgga
aatggaggtggatggaacacggagcaaccctccattctaaaccaaagtttgtcactcaag
ccctatcagaaggttggtttgaattggctggcattggtacataaacatggacttaatggc
attttggcagacgaaatgggcctgggtaaaactattcaagccattgcatttctggcgtac
ctctatcaggagggtaataaaggtcctcatttgattgttgttccagcatcaactatagat
aactggttaagagaagttaatttatggtgccccactttaaaggtgctctgttactatggt
tctcaagaagaacgtaaacagattagatacaacattcatagtagatatgaagaatacaat
gtaatcgtgaccacgtataactgtgccatcagcagttctgatgatcgtagtctgtttcgt
cggctgaaactgaattatgcaatttttgatgagggccatatgctgaagaatatgggctcc
atccgctaccagcaccttatgacaattaatgcaaataaccgtctgctgctcacaggcaca
cctgtgcaaaataacctgttagaactcatgtcactgttgaattttgttatgccacatatg
ttcagtagtagcaccagtgaaatacgaagaatgttttcttctaagacaaaatcagcagat
gagcaaagtatatatgaaaaggagagaatagcgcatgcaaaacaaattataaaaccattt
attctcagaagagtaaaagaagaggttctcaagcagctaccccccaaaaaagatcgaatt
gaattatgtgcaatgtcagagaagcaggaacaactgtatatgaatctcttcaacagattg
aaaaagtctatcaataacctggaaaaaaatacagaaatgtgcaatgtcatgatgcaattg
agaaaaatggccaatcatcctttattacatcgccagtattacacagctgaaaaactcaag
gaaatgtctcagcttatgctaaaggaacctacacattgtgaggctaaccctgacctgatc
tttgaagatatggaagttatgacagactttgaattacatgtactttgtaaacagtatcga
catattaataacttccagttagacatggacttgattttagattctggaaaatttcgagtt
ttaggatgcatcttgtctgaattgaagcagaagggtgatagagttgtattatttagccaa
tttaccatgatgctggatattttagaggttctcttaaaacatcatcagcataggtacctc
agattagatgggaagactcagatttctgaaaggattcatctaattgatgagtttaatacc
gatatggatatctttgtctttctgctgtcaacaaaagctggtggcttaggaataaacctg
acgtcagcaaatgttgttatacttcatgatattgactgtaatccttacaatgacaaacaa
gcagaagatagatgccacagagtaggccagacaaaagaagtactagttataaaattaata
ggccaagggacaattgaagaatccatgctaaaaattaatcaacagaagttgaaactagaa
caagatatgaccacagtagatgaaggtgacgaaggaagtatgccagcagatatagccacg
ttactaaaaacatcaatgggcctgtga
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