Oryx dammah (scimitar-horned oryx): 120862012
Help
Entry
120862012 CDS
T07255
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120862012 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oda01009
]
120862012 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oda04515
]
120862012 (PCDH7)
Protein phosphatases and associated proteins [BR:
oda01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120862012 (PCDH7)
Cell adhesion molecules [BR:
oda04515
]
Cadherins
Protocadherins
120862012 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
TMEM154
LYRIC
KIAA1549
MLANA
EphA2_TM
Adeno_E3_CR2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
120862012
NCBI-ProteinID:
XP_040093920
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MLRMRTMGWARAWCLGCCLLLPLSLSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGGGGEGRRAGPADSAPYPGGGGNGGSGGGPGGSKRRLDAPEGGGGTSPGGR
SSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITD
VNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRL
DETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPSIEIRKI
GRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDTEGDQ
NKKKYFLHTSAPLDYETTREFNVVIVAVDSGSPSLSSNNSLIVKVGDTNDNPPVFGQSVV
EVYFPENNIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPDSGDILVNTVLDRE
QTDRYEFKVNARDKGVPVLQGSTTVIVQVADKNDNDPKFMQDIFTFYVKENLQPNSPVGM
VTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDP
PRSATATVSLFVMDENDNAPTVTLPRNISYTLLPPSSNVRTVVATVLATDSDDGINADLN
YSIVGGNPFKLFEIDSTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVN
ESVSNATVIDSQIARSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVM
ARYCRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVEASKPN
GQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQA
VQDLPPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQPFRRVTFSVVSQPQDPHQGSLQ
SCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENDSRPLPDVAL
TGKCTRECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAAIMGDR
NRNLLNKKLTSSYETFSAASFSKNEDANTEDIPLTKTGEYKPSPVNTLTRREVYL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatgcggaccatgggatgggcgcgcgcctggtgtctgggctgctgtctcctc
ttgccgctctcgctcagcctagcggccgccaagcaactcctccggtaccgactggccgag
gagggcccagcagacgtccgcatcggcaacgtcgcctcggacttgggcatcgtgaccggc
tccggtgaggtgactttcagcctcgagtcgggctcagagtacctgaagatcgacaatctc
accggcgagctgagtacgagcgagaggcgcatcgaccgcgagaaactgccccagtgtcag
atgatcttcgacgagaatgagtgcttcttggacttcgaggtgtcggtgatcgggccctcg
cagagctgggtggacctgttcgagggtcgggtcatcgtgctcgacatcaacgacaacacg
cccaccttcccgtcacccgtgctcacgctcacggtggaggagaaccggccggtgggcact
ctctacctgctgcccaccgccaccgaccgcgacttcggccgcaatggcattgagcgctac
gagctgctacaggagcccgggggcggcggcggcggcggcgagggcaggcgcgccgggcct
gccgacagcgccccctaccccgggggcggcgggaacggcgggagcggcggcggccccggg
ggctccaagaggaggctggacgcgccagaaggcggcggcgggaccagccccggcggacgc
agcagcgtgttcgaactgcaggtggccgacaccccggatggcgaaaagcagccgcaactg
atcgtgaagggggcgctggaccgcgaacagcgcgactcctacgagctgaccctgagggtg
cgcgacggtggcgacccgcctcgctcctctcaggccatcctgcgggtgctcatcaccgac
gtgaacgacaacagcccccgcttcgagaagagcgtgtatgaggctgacctggccgagaac
agcgccccggggacccccatccttcagctgcgtgccgccgacctggacgtgggggtcaac
gggcagattgagtacgtgttcggggcggctaccgagtccgtgcggcggctgctgcgccta
gacgagacgtccggctggctcagtgtcctgcaccgtatagaccgcgaggaagtgaaccag
ctgcgcttcacggtcatggcccgcgatcgcgggcagcctcccaagacagacaaagccacg
gtggtccttaatatcaaggacgagaacgacaatgtgccgtccattgaaatccgcaagatc
gggcgtatcccactcaaggatggggtggccaacgtggccgaggacgttctggtggacacc
cccattgccctggtgcaggtgtctgaccgagaccaaggcgagaatggagtggtcacctgc
accgtggtgggcgacgtgcccttccagctcaagccggccagtgacacagagggcgaccag
aacaagaaaaagtacttcctgcacacctcggcccctttggactatgagaccaccagggag
ttcaacgtggtcatagtagcggtggactccggcagccccagtctctccagcaacaactcc
ctgattgtcaaggtgggagacaccaacgacaacccgcctgtctttggccagtcagtggtg
gaggtgtactttcctgagaacaacatccccggagagagggtagccacggtgctggctaca
gacgcggacagtgggaaaaacgctgaaatcgcctactcgctggactcttccgtgatgggg
atctttgccatcgatcccgattctggggacattctcgtcaataccgtgctggaccgcgag
cagactgacaggtatgagtttaaagttaacgccagagacaaaggcgtccccgtgctacag
ggcagcaccacagtgattgttcaggtggctgacaagaatgacaatgaccctaagttcatg
caggacatctttaccttttatgtgaaagaaaatttacagcccaacagccccgtgggaatg
gtcacagtgatggatgctgacaaggggcgcaatgcagagatgagcctatacatagaggag
aacagtaacattttttccattgaaaatgacacggggactatttactccacaatgtctttt
gacagagaacatcagaccacatacactttcagagtcaaagctgtggatgggggagatcct
cccagatctgcaacagccacggtctctctctttgtgatggatgagaatgacaatgctccc
actgtcacccttcccagaaatatttcctacactttactgccaccttcaagtaacgtcagg
acagtagtagctacagtgttggcaacagacagtgatgatggcatcaatgcagaccttaac
tacagcattgtgggagggaatcccttcaagctgtttgagattgattccaccagtggtgtg
gtttccttagtgggaaaactcacccaaaagcattatggcttgcacaggttggtggtgcaa
gtgaatgacagtgggcagccttcccagtctaccacgactctggtgcatgtgtttgtcaat
gaaagtgtttctaatgcaactgtgattgactcccaaatagccagaagcttgcacacccca
ctcacccaggatatagctggtgacccaagctatgaaattagcaaacagagactcagtatt
gtcattggggtggttgctggaattatgactgtgattctaatcatcttaattgtagtgatg
gcaagatattgccgatccaaaaataaaaatggctatgaagccggcaaaaaagatcatgaa
gacttttttacaccccaacagcatgacaaatctaaaaaacctaaaaaggacaagaaaaac
aaaaaatctaagcagccactctacagcagcattgtcactgtagaagcttctaaaccaaat
ggacagaggtatgatagtgtcaatgagaagctgtcagacagcccaagcatgggccgatac
cgatcagttaatggtgggcctggcagtcctgacctggccaggcattacaaatctagttcc
cccttgcctactgtccagcttcacccccaatcaccaactgcaggaaaaaaacaccaggcc
gtacaagatctaccaccagctaatacatttgtgggagcaggagacaacatttcaattgga
tcagatcactgctctgagtacagctgtcaaaccaataacaaatacagcaaacagccattt
cgtagagtgacgttttctgttgtgagtcagcctcaggacccacatcaggggtcactgcag
agttgctatgacagcgggctggaggagtcagaaacaccaagcagtaagagttcatcaggg
ccaagactgggtgcccttccactcccagaggacaactatgaaaggaccacgccggatggc
agtgttggtgaggcagagcatatggaaaatgattcaagacctcttccagatgtagccctg
actgggaagtgtacccgtgagtgtgatgagtacggccattccgactcctgctggatgcct
gtccgcacttctccagagaggaagaagagccagcccaaactctccactttcatgcctgtt
gatgaacgaggaagccaggaaaaactggctaatggtgaggccgccatcatgggcgaccgc
aacagaaacctcctgaacaaaaagttgacctcatcctatgagaccttcagtgcggctagt
ttcagcaaaaatgaggatgccaacactgaggatattccccttacaaaaacgggggaatac
aagccatctcctgtcaatactctcactagaagagaagtttacctgtag
DBGET
integrated database retrieval system
