Oryx dammah (scimitar-horned oryx): 120862042
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Entry
120862042 CDS
T07255
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03030
DNA replication
oda03410
Base excision repair
oda03420
Nucleotide excision repair
oda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120862042 (RFC1)
03410 Base excision repair
120862042 (RFC1)
03420 Nucleotide excision repair
120862042 (RFC1)
03430 Mismatch repair
120862042 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oda03032
]
120862042 (RFC1)
03400 DNA repair and recombination proteins [BR:
oda03400
]
120862042 (RFC1)
DNA replication proteins [BR:
oda03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120862042 (RFC1)
DNA repair and recombination proteins [BR:
oda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120862042 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
BRCT_2
AAA_14
RuvB_N
AAA_5
Rad17
AAA_33
AAA_7
AAA_30
AAA_18
AAA_17
AAA_16
nSTAND3
Zeta_toxin
RNA_helicase
AAA_19
NTPase_1
Nexin_C
NPHP3_N
YABBY
Motif
Other DBs
NCBI-GeneID:
120862042
NCBI-ProteinID:
XP_040093967
LinkDB
All DBs
Position
Unknown
AA seq
1144 aa
AA seq
DB search
MDIRKFFGVIPSGKKLVSETVKKNEKTKSAEETLKAKKGIKEIKVNNSCTEDEIKPKHSN
KKKRIIYDSDSESEETVQVKNAKKRPEKLPLSSKPAKIQQQDPVTYISETDEDDDFVCKK
TASKSKENGGSTNSYLGASNMKKNEEYTKTKNKPLSPIKLTPTSVLDYFGTGSIQRSDKK
MVASRRKEPSQNADDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
AEKAAEEREMFSSEQVNLCKAEKPKYPHKEQFSDERKNFSPKKQTKCEGSRESQQRSRSS
AHKTGEASPKASSKLALLKKKEESSNKETESMASKRKENVIELKETRTPKKIKSSPAKKE
SISPDDAEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIERDE
AKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTNIIDEDGLLNLIRTMPGK
KSKYEIAAEAEMKKEKSKLERTPKKNDQGKRKSSPTKKESESKKCKLTPKRESSIKSLKK
EASVSQRGLDFKEQAAEEANGDSRARNLADDSRESKVESLLWVDKYKPTSLKTIIGQQGD
QSCANKLLRWLQNWHKSPSEDKKHAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTASLV
CQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIKGFYSSGTVHSVGTRHALIMDEVDG
MAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAM
MSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLNMWCARNKALTYDQAKADSHRAKKDI
KLGPFDVARKVFVTGEETAHMSLMDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDMKKH
LMLLSRAADSICDGDLVDRQIRNKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFPSWLG
KYSSMGKHDRTVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVQPLASQGIEGVQDVVAL
MDAYYLMKDDFENIMEISNWGGRPSPFSKLDPKVKAAFTRAYNKEVHLTPYSLQAVKTHR
QSTGPSLDSEYNEELNEDDSQSDEKDQDTLETDAMIKKKTKSSKPSKSEKDKESRKGKGK
SSKK
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgaaaattctttggggttataccaagtggaaagaaacttgtaagtgaaaca
gtaaagaagaatgagaaaacaaagtctgctgaagaaactttaaaagcaaagaaaggaata
aaggaaatcaaggtaaataattcttgtacagaagatgaaatcaagccgaagcactcaaac
aagaaaaagaggatcatctatgattcggattcagaatcagaggaaacagtacaggtaaaa
aatgccaaaaaacgaccagaaaaattgccactgtcttctaaacctgctaaaatccaacag
caggatcctgttacctacatttcagaaacagatgaagatgatgactttgtatgtaagaag
acagcctctaaatcaaaagaaaatggaggatctacaaatagttatcttggagcatcaaac
atgaaaaagaatgaggaatacactaagaccaagaataagcctttgtcaccaataaaactt
acccccacatcagtgcttgattattttggaactggaagcatccaaagatcagataagaag
atggtggcaagcagaagaaaagagccttcacaaaatgcagatgattccagattaaatgat
gaagccatcgccaagcaattacaacttgatgaagatgcagagctggagagacaactgcat
gaagatgaagagtttgctagaacgttagccatgttggatgaagaacccaagaccaaaaag
gctgaaaaggctgcagaagaaagagagatgttttcatctgaacaagtcaatttatgtaaa
gcagagaaacctaaataccctcataaagaacaattttcagatgaaagaaagaacttcagc
cctaagaagcaaactaagtgtgaaggttcaagagaatcccagcaacgttccaggtcatca
gctcataaaacaggagaagcttctccaaaagccagttctaagctggcacttttgaaaaaa
aaagaagagagttctaataaagaaacagagtctatggcctcaaaaagaaaagaaaatgtt
attgagttaaaagagacaagaactcctaagaaaatcaaaagttctccagctaaaaaagag
tctataagtcctgatgatgctgaaaagagacgcactaattatcaagcttaccgaagctac
ttaaatcgagaaggtcccaaagctctgggctccaaagaaataccaaagggagctgaaaat
tgcttggaaggccttacgtttgtaatcacaggagtgctggagtccattgaacgagatgag
gccaagtctctaattgagcgttatgggggaaaagtgacgggaaatgtcagcaagaaaaca
aactacctggtcatgggtcgtgatagtggccaatccaagagtgacaaggcagcagccttg
ggaacaaatattattgatgaagatggcctgttgaatctgattcgaaccatgccaggcaag
aagtccaagtatgaaatagccgctgaagctgagatgaagaaagaaaaatccaaattggaa
agaacacccaaaaaaaatgaccaaggaaaaagaaaaagtagtccaactaagaaggaatca
gaatctaaaaagtgcaaactgactcccaaaagggaaagctctataaagtcactaaaaaag
gaagcaagtgtgtctcagagaggcctggacttcaaggagcaggcggctgaggaggcaaat
ggtgacagccgggctaggaatttggctgatgacagcagagaaagcaaagtggaaagtttg
ctctgggtggataagtataagccaacctcgctcaagaccataattggacagcaaggtgac
cagagctgtgccaacaaactcctgcgctggctccaaaactggcacaagagtccatccgaa
gataagaaacacgcagcaaagtttggtaaatttgctggcaaagatgatgggtccagtttt
aaagcggcattgctctcaggtcctcctggtgttggcaaaacaaccacagcttctctggtt
tgtcaggaattggggtatagctatgtggaactgaatgcaagtgacactcggagtaagaac
agtttgaaggagattgttgctgagtcactgaataataccagcatcaaaggcttttattca
agtggaacagtccattcagtaggcacgaggcatgctctcatcatggatgaagtagatggc
atggctggcaatgaggacaggggaggaattcaggaattaattggcctgataaaacataca
aaaattcccattatttgtatgtgcaatgatagaaatcatcccaagattcgctctttggtt
cattattgttttgatcttcgttttcaaagacctcgggttgaacagattaagggtgctatg
atgtctattgcatttaaagagggtctaaagatcccccctccagctatgaatgaaataatt
ttgggagctaatcaagatatcagacaggttttacacaatctgaatatgtggtgtgcacga
aataaggcactaacctatgaccaggccaaggctgattctcatagagccaaaaaggatatc
aaactgggcccgtttgatgttgcccggaaagtgtttgtaactggagaagagactgctcat
atgtcacttatggacaaatcagacctctttttccatgattattcaatagcacccctcttt
gtccaggagaactacatacatgtgaagcccgtagctgcagggggtgacatgaaaaagcac
ttgatgcttttaagcagagcagcagacagcatatgtgatggtgacctagtagaccgtcaa
atccggaataagcaaaactggagtcttctgcccacacaggccatttatgccagtgttctt
cctggagagttaatgagggggtacatgacccagtttcccaccttcccaagttggttgggg
aaatactcatctatgggcaaacacgatcgtactgttcaggacctggctctgcatatgagt
ctcagaacttactccagcaaaaggacagtaaacatggattatctgtcacatataagggac
gcacttgtacagcccttggcctcacaagggatagaaggagtacaggatgttgttgctctc
atggatgcatattatttgatgaaagatgacttcgagaatattatggaaatcagcaactgg
ggaggcagacctagtccgttttctaaactggatcccaaggtgaaagcagccttcacaaga
gcttacaataaagaagtccaccttactccgtattcactccaggcagtaaagacacacaga
cagagcacaggcccatcactggattctgaatacaatgaagagttaaatgaagatgactct
cagtctgatgagaaagaccaggacactttggaaactgatgctatgatcaagaaaaagaca
aaatcttcaaagccttcaaaatcagaaaaagataaggagtccagaaaaggaaaaggaaaa
agttcaaagaaatga
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integrated database retrieval system
