Oryx dammah (scimitar-horned oryx): 120862117
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Entry
120862117 CDS
T07255
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120862117 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120862117 (FIP1L1)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120862117 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
120862117
NCBI-ProteinID:
XP_040094135
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHTDLAKDLDENEVERPEEENASANP
PSGIEDETPENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTVGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYG
FNEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQG
RTGNAEKETALPSTKAEFTSPPSLFKTGLPPSRRLPGAIDVIGQTITISRVEGRRRANEN
SNIQVLSERSATEVDNNFSKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPI
TVPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPYGNVAFPHLPGSTPSWPSLVD
TSKQWDYYSRREKDRDRERDRDRERDRDRDRERERTRERERERDHSPTPSVFNSDEERYR
YREYAERGYERHRASREKEERHRERRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHK
KSKRSKEGKEAGSEPAPEQESTEATPAE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctctatggcggcccatgggacgtgcatgtgcacactgatttggca
aaggacctagatgaaaatgaagttgaaaggccagaagaagaaaatgccagtgccaatcct
ccatctggaattgaagacgaaactcctgaaaatggcgtacctaaaccgaaagtgactgag
actgaagacgatagtgatagcgacagtgatgacgatgaggacgatgttcacgtcactata
ggagacattaaaacgggagcaccacagtatgggagttacggtacagcacctgtaaatctt
aacatcaagacaggaggaagagtttatggaactaccgtaggaacgaaagtgaaaggagta
gatcttgatgcacctggaagcattaatggagttccactgttggaggtagatttggattct
tttgaagataaaccatggcgtaaacctggtgctgatctttctgattattttaattacggg
tttaatgaagatacctggaaggcttactgtgaaaaacagaagaggatacgaatggggctt
gaagttataccagttacctctactacaaataaaattacggccgaagactgtactatggaa
gttacaccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcaggga
agaactggaaatgcagagaaggaaacagcgcttccatctacaaaagcggagtttacttct
cctccttctttgttcaagactggacttccaccaagcaggagattacctggggcaattgat
gttattggtcagactataactatcagccgagtagaaggaaggcgacgggcaaatgaaaac
agcaatatacaggtcctttctgaaagatctgctactgaagtagacaacaattttagcaaa
ccacctccatttttccctccaggagctcctccaactcaccttccacctcctccatttctt
ccacctcctccaactgttagcactgctccacctctgattccaccaccaggtattccaata
actgtaccacctccaggttttcctcctccaccaggtgctccacctccatcccttatacca
acaatagaaagtggacattcctctggttatgatagtcgttctgcacgtgcttttccatat
ggcaatgttgcctttccccaccttcctggttctactccttcatggcctagtcttgtggac
accagcaagcaatgggactattactcaaggagagagaaagaccgagatagagagagagac
cgagaccgagaacgagaccgtgatcgagacagagaacgagaacgcaccagagagagggag
agggagcgtgatcacagtcccacaccgagcgtcttcaacagtgatgaagaacgatacaga
tacagggagtatgcagaaagaggctatgagcgccacagagcaagtcgggagaaagaagaa
cgacacagagaaagacgacacagagagaaagaggaaaccagacacaagtcctctcgaagc
aatagtagacgtcgccatgaaagtgaagaaggagacagtcataggagacacaagcacaaa
aaatctaaaagaagcaaagaaggaaaagaagctggcagtgagcctgctcctgaacaggag
agcactgaagctacacctgcagaatag
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