Oryx dammah (scimitar-horned oryx): 120862278
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Entry
120862278 CDS
T07255
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
120862278 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oda00536
]
120862278 (COL25A1)
Glycosaminoglycan binding proteins [BR:
oda00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120862278 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
120862278
NCBI-ProteinID:
XP_040094312
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MILRKNGVCNAKGPSLCEQLGRPSSYGHTKPGCADTHSAPVLSDSPSKDLLQEVGVCQAS
PQLLLCTVIRSSPSRFVVDTHACSVRARNQHKSEQEQLNWLAESSHSLSSLTAGYRASRT
SPPSGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPVSCFFGSVVLTGFVSFEVLR
IGMELGTRGGGGQGPLGPPGQKGSVGVPGIPGMNGQKGEPGLPGAVGQNGIPGLKGEPGE
QGVKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEP
GFIGPQGEPGLPGLPGTKGERGEAGPPGRGDRGEPGAPGPKGKQGESGTRGPKGSKGDRG
DKGDSGALGPRGPPGQKGDPGATEIIDYNGNLHEALQASDCSPS
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgatactgcggaagaacggcgtgtgtaatgctaaagggccctctctgtgtgaacagcta
gggcggcctagcagttacggtcacacaaagcctgggtgcgcagacacgcactcggcacca
gtgctttcagactcgccctccaaggacctcctgcaggaagtaggggtctgccaggcttcc
ccacagttgctgctctgcacagtaatcagatcctcaccgtcaaggtttgtggttgacacc
catgcctgctcagtcagagcccgcaatcagcataagagtgagcaagaacagctcaactgg
cttgccgagtccagtcactccctttcatccctcacagcaggctatcgggcatccaggacc
tcacctccatcaggtgaccaaggtcaggctgggccgccaggccctccaggcccaccgggc
ccaagagggccacctggggacacagggaaggatggcccccgcggaatgccaggcgtgccc
gtgagttgcttttttggatcagttgttctcactggttttgtttcctttgaagtgctgaga
attgggatggagttgggaacgaggggtggtggaggtcagggtcctctaggacctccagga
caaaagggttctgttggagtacctggaattccagggatgaatggacaaaagggtgaacct
gggttgcctggagcagtgggacagaatggcataccagggctaaagggagaacctggagaa
caaggagtaaagggagatgctggagagaatggtcccaaaggtgacacaggcgaaaagggt
gacccgggatcgtctgctgcaggaattaagggagaacccggagaatctggtcgtccaggg
caaaagggtgaaccagggcttcctgggcttcctggacttccggggataaagggagaacca
ggtttcattggtcctcagggagaaccaggcttaccagggttaccaggaacaaagggcgaa
cgtggggaggcagggcctcctggacgaggggatcgaggggagcccggagccccgggacca
aaggggaaacaaggtgaatcaggaactagaggcccaaaagggtcaaagggcgatcgtgga
gacaagggggactctggagccctgggaccaaggggtccacctggtcaaaagggagatcca
ggagccaccgaaatcatagactacaatggcaacctccacgaagccttgcaggcaagtgac
tgctccccatcctga
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