Oryx dammah (scimitar-horned oryx): 120862554
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Entry
120862554 CDS
T07255
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
oda
Oryx dammah (scimitar-horned oryx)
Pathway
oda03013
Nucleocytoplasmic transport
oda03015
mRNA surveillance pathway
oda03040
Spliceosome
oda05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120862554 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
120862554 (NCBP1)
03015 mRNA surveillance pathway
120862554 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
120862554 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120862554 (NCBP1)
03041 Spliceosome [BR:
oda03041
]
120862554 (NCBP1)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
120862554 (NCBP1)
Spliceosome [BR:
oda03041
]
Common components
Common spliceosomal components
Cap binding complex
120862554 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
120862554
NCBI-ProteinID:
XP_040094518
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMVRQLKESLKSNN
FNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFASTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDFVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgagaacgatgggggacaacctcacaaaaggagaaag
acctctgatgcaaatgaaactgaagatcacttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctttggagagcaacctagaaggcttggctggtgttttggaagctgat
cttcctaattacaagagcaagatcttaaggcttctttgtacagttgcacgtctgttacct
gagaagttgaccatttatacaacgttagttggactcctgaatgccaggaattacaacttc
ggtggagaatttgtagaagccatggttcgccaactgaaagaatcattgaaatcaaacaat
tttaatgaagctgtatatttggtccgttttctatctgatcttgtgaattgtcatgtcatt
gctgccccatcaatggttgctatgtttgaaaattttgtaagtgtaactcaggaagaagat
gtgcctcaggtgcgacgggattggtacgtgtatgcgtttctgtcatccttgccctgggtt
ggaaaggagttgtatgaaaagaaagatgcagagatggaccgaatctttgccagcactgaa
agctatcttaaaagacgccaaaagactcatgtacccatgttacaagtgtggaccgcagag
aaaccacatccgcaagaagagtatttagattgcctctgggcccagattcagaaattgaaa
aaggatcgctggcaggagcggcacatcctaagaccttatcttgcctttgacagcatcctg
tgtgaagcactgcagcacaacctgcctccgttcacaccaccacctcacacagaagactcg
gtgtacccgatgccaagggtcatcttcagaatgtttgattacacagatgatcctgagggt
cctgtaatgccagggagtcattcagtggaaagattcgtaatagaagagaatcttcactgc
atcattaagtcccattggaaggaaaggaagacctgtgctgcacagctagtgagttatcct
gggaagaacaagatccccttgaactaccacatagttgaggtgatctttgcagagctgttt
cagcttccagcaccgcctcatatcgatgtgatgtacacaacacttctcattgaactgtgc
aaacttcagcctggctctctaccccaagttcttgcacaggcaactgaaatgttatatatg
cgtttggacacgatgaatactacatgtgtagacaggtttattaattggttttctcatcat
ctaagtaacttccaattccgttggagctgggaagattggtcagattgtcttactcaagat
ccagaaagtcccaaaccaaagtttgtaagagaagttctagaaaaatgtatgaggttgtct
taccatcagcgtatattagattttgtccctcctaccttctcagctctatgtcctgcaaac
ccaacctgcatttacaagtatggagatgaaagtagcaactctcttcctggacattcggtt
gccctctgtttagctgttgcctttaaaagtaaagcaaccaatgatgaaatcttcagcatt
ctgaaagacgtccctaatcctaatcaggatgatgatgatgatgaaggattcagctttaac
ccactgaaaatcgaggtctttgtacagactttgctacacttagcagccaagtcgttcagc
cactccttcagtgctcttgcaaagtttcatgaagtcttcaaaaccctagctgaaagtgat
gaaggaaaattacatgttctaagagtcatgtttgaggtctggcggaaccatccacagatg
attgctgtactagtagataagatgattcgtacgcagattgttgactgtgctgcagtagca
aactggatcttctcttcagaattatctcgtgactttactagattgtttgtttgggaaatc
ttgcactccacaattcgtaagatgaacaaacacgttctcaagatccagaaagagctagaa
gaggctaaagaaaaactcgcaaggcaacacaaacggcgaagtgatgatgatgacagaagc
agtgacaggaaagatggggctcttgaagaacaaatagaaagactgcaggaaaaagtggag
tctgctcagagtgaacaaaagaatcttttccttgtcatatttcagcgttttatcatgatc
ctgaccgagcacttagtacgctgtgagactgacgggaccagtgtgttaacaccatggtat
aagaactgtatagagaggctccagcagatcttcctacagcatcaccaaataatccagcag
tacatggtgaccctggagaacctgctcttcactgctgagttagaccctcacatcctggct
gtgttccagcagttctgtgccctgcaggcctaa
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