Oryx dammah (scimitar-horned oryx): 120862640
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Entry
120862640 CDS
T07255
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oda03021
]
120862640 (SCAF8)
03041 Spliceosome [BR:
oda03041
]
120862640 (SCAF8)
Transcription machinery [BR:
oda03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120862640 (SCAF8)
Spliceosome [BR:
oda03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120862640 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120862640
NCBI-ProteinID:
XP_040094664
LinkDB
All DBs
Position
Unknown
AA seq
1268 aa
AA seq
DB search
MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGLPDPWVS
QITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQL
TAAAAAANTLNPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKEIPASQLSHVSESVNNSIF
HQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEA
NLDDSIDIQQQDMDIDEVQDAVEEEIFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRS
GSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIG
SKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWE
TVKSSEPVKETVQTTQSPPPAEKETVVTTQAEVFPPPVAMLQIPVAPAVPAVNLVPPAFP
VSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPPL
SMTPETVKDVGFGSLVLPGGSVASSLATATLPAGNVFNPPTKQAEPEEKVPHLIDHQISS
AENTRSVIPNDISSGPAILGQPPNVTSNSGILGVQRPNVSSNNEILGVRPSNVSSSSGMI
GPQPPNILNNSGILGLQPPNVSNSSGLLGVLPPNMPNNSGLLGVQPPGVPSTSGLLGTQP
PAGPQNLPPLNLPNQRMPAMPMLDIRPGLIPQTPGPRFPLIQPGIPPQRGLPPPAVLDSA
LHPPPRGPFPPGDIFSPPERPFLVPGRQNVDNVPNPEKRIPLGNDNIQQEGDRDYRFPPI
EPREAISRPPPVDVRDVVGRPVDPREGPGRPPLDARDHFGRPPVDIRENLVRPGIDHLGR
RDHFGFNPEKPWGHRDFDEREHRVLPVYGGPKGLHEERGRFRSGNYRFDPRSGPWNRGFG
QEVHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRLGRDRIQNTWIPPPHARVFEIFEGA
TSQRKGDNVPQVNGENTERHAQPPPLPAQSDPELYEKLASSSEINKKSDTVADIESEPVV
ESTETEGT
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtgaaaaccttcaatagcgagttgtattccctgaatgactacaagccaccc
atttctaaagcgaaaatgacccaaattactaaggcagccatcaaagctataaagttctat
aaacatgtggtacagagtgttgagaaattcattcagaaatgtaaaccagaatataaggta
cctggactttatgttattgactctattgtacgacaatctcgacatcagtttggtcaagaa
aaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaatttatac
cgttgccctggagatgacaagagtaaaatagtgagagtgttaaacttatggcagaagaat
aatgtatttaagagtgagattattcagcctcttctggatatggcagcagggattcctcct
ccagttgtcacacctgttctggccagtactactgctgctatgagcaatactccaggaact
cctgtgacacctgttactccagccaatgtggtccaaggtttacctgatccgtgggtgtct
cagataacaaatacagatacacttgcagcagtagctcagatcttacaaagtcctcaaggc
caacagcttcagcagttaatacagactttacagatacagcagcagaagcctcagccctcc
atcctgcaagccctggatgctggccttgtggtccagctacaggctcttacagcacagctt
acagcagcagctgcagcagccaacacccttaatcccctagaacagggggtgtcttttaac
aagaagttgatggataggtttgattttggggaagattctgagcatagtgaagaacccaaa
aaggaaattccagcctctcaactttctcatgtttcggaatctgtgaacaattccatcttt
catcagatagcagaacaactgcagcagcaaaatcttgaacatctcagacagcagctcctg
gaacagcaacagcctcaaaaggcaactcctcaggatagtcaagaaggaacatttgggtca
gaacattctgcatcaccatcacaagggagcagtcagcagcatttccttgaacctgaagca
aatttggatgattccatagatattcagcaacaggatatggatatagatgaagtgcaagat
gcggtggaagaggagatctttgaacaggaagcaaagaaagtggctgttcgttcaagatca
agaacacactcccgatctcgttcaagatcaccaagaaaacgaaggtctaggtcacgatct
ggttctcgaaagcgtaagcacagaaagcgatcacgctcccgctctagagaaagaaaaagg
aaatcatcacgttcatactcaagtgaaaggagagctagagaaagggagaaagaacgacag
aagaagggattacctccaattagatctaaaacattaagtgtgtgcagtactactctgtgg
gttggtcaggtggacaagaaggcaacacagcaagatttaaccaacctgtttgaagagttt
ggacagattgagtccattaatatgattcctcccagaggctgtgcttatgtctgcatggtt
catcgacaagatgcatttcgagctcttcagaaacttagttccgggtcatataaaattgga
tccaaggtcattaagattgcttgggctttaaacaaaggtgtgaaaacagaatacaaacaa
ttctgggatgtggatcttggagttacatatataccgtgggaaaaagttaaagtggatgac
ttggaaggttttgcagaaggaggcatgatcgatcaagaaactgtaaatactgaatgggaa
acggtgaaaagctcagaacctgttaaagagacggtccagacaactcagagcccacctcca
gctgaaaaggagacagtggtcacaacccaggcagaggttttccctccacctgttgctatg
ttacagattccagtggccccggcagtgcctgcggttaatttagtgccaccagcatttcct
gtgtcaatgccagttcctcctcccggcttcagtccaatccctccgcctccttttctccga
gcaagtttcaacccttcacaaccaccgcctggtttcatgcctcctccagttccaccccct
gttgtaccaccacctactatcccgccagtagtaccaacatctttagtgcaaccaccatta
tctatgactccagaaactgtgaaagatgttggatttggtagccttgttttaccaggtggt
tctgttgccagcagtcttgctactgccactctgccagctggaaatgtttttaatcctcca
acgaagcaagcagagcctgaagaaaaagtacctcatcttattgatcatcagatttcttct
gcagaaaacaccagatcagtgattccaaatgatatttcaagtggccctgcgattttagga
cagccgccaaatgtgacaagcaattctggaattctgggagtgcaaagaccaaacgtatcc
agtaataatgaaattcttggagtccggccatctaacgtttccagtagttctgggatgatt
ggaccccagccaccaaatattttaaataactctggaattttgggattacagccaccaaat
gtgtcaaatagttctggacttttgggagtgctccccccaaatatgcctaataattccgga
cttctcggagtacagccacccggtgtcccaagtacttctgggcttttgggaacacagcca
ccagctgggcctcaaaacttaccccctttaaatcttcctaatcaaaggatgcctgcaatg
ccaatgttagacattcgtccaggactgataccacagacacctggaccacgattcccgtta
atacagcctggaattccaccccagcggggactccctcccccagcagtactcgattcagct
ctgcatccaccaccccgtggtccttttcctccaggagatatttttagtccacctgaaaga
ccttttctagttcctggaagacaaaatgtagacaatgttcctaacccagaaaaaaggata
ccacttgggaatgataacattcagcaggaaggtgacagagattaccggtttcctcccatc
gaacccagggaggccatcagtagacctcccccggtggatgttagggatgtggttggacga
cctgttgatccacgagaaggtcctggaaggcctccgttagacgctagagatcattttgga
agacctcccgtagatatcagggagaatctcgtgaggccaggcatagatcatcttggccga
agagaccactttggctttaatccagagaagccctgggggcacagagattttgatgagcga
gaacatcgagttctacctgtctatggcggtccgaaaggcttacatgaggaaagaggtaga
tttcggtctggaaactaccggtttgatcctcgaagtggtccttggaacagaggattcgga
caagaagttcacagagattttgatgaccgcagaagaccctgggagaggcagagggacagg
gatgacagagattttgatttctgcagagaaatgaatgggaatcgtcttggacgagataga
attcaaaacacctggatcccccctcctcatgctcgggtttttgagatttttgaaggggcc
acttctcaacgaaaaggtgataacgtgcctcaggttaatggtgaaaatactgagagacat
gcccagccaccgcctttaccagcacagagtgatcctgaactgtatgaaaaactggcatcc
tcaagtgaaataaacaagaagagtgacacagttgctgatatagagagtgaaccagtggta
gaaagcacagaaactgaggggacataa
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